RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ADH1AP07327 375 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 AMPD1P23109 780 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 GJA5P36382 358 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 PTGIRP43119 386 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 MAP2K3P46734 347 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 FOXD4L6Q3SYB3 417 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 INTS6LQ5JSJ4 861 aaKnown RBP5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 ARTNQ5T4W7 220 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 RSBN1LQ6PCB5 846 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 FOXD4L3Q6VB84 417 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 CABLES1Q8TDN4 633 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 SLC10A4Q96EP9 437 aa5.66□□□□□ -1.5
RNU6-1140P-201ENST00000410517 LINC00114Q6XXX2 140 aa5.65□□□□□ -1.5
RNU6-1140P-201ENST00000410517 C1orf229Q6ZS94 237 aaPredicted RBP5.65□□□□□ -1.5
RNU6-1140P-201ENST00000410517 EDARADDQ8WWZ3 215 aa5.65□□□□□ -1.5
RNU6-1140P-201ENST00000410517 TMPRSS4Q9NRS4 437 aa5.65□□□□□ -1.5
RNU6-1140P-201ENST00000410517 TBC1D2Q9BYX2 928 aa5.64□□□□□ -1.51
RNU6-1140P-201ENST00000410517 CDV3Q9UKY7 258 aaKnown RBP5.64□□□□□ -1.51
RNU6-1140P-201ENST00000410517 PIK3R2O00459 728 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 GNB5O14775 395 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 ADD1P35611 737 aaKnown RBP5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 RNF144AP50876 292 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 RAB15P59190 212 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 CSPP1Q1MSJ5 1256 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 ZNF784Q8NCA9 323 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 KLRG1Q96E93 195 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 ARHGAP9Q9BRR9 750 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 BEGAINQ9BUH8 593 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 DYRK1BQ9Y463 629 aa5.63□□□□□ -1.51
RNU6-1140P-201ENST00000410517 TTLL12Q14166 644 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1140P-201ENST00000410517 KDF1Q8NAX2 398 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1140P-201ENST00000410517 GPKOWQ92917 476 aaPredicted RBP eCLIP5.62□□□□□ -1.51
RNU6-1140P-201ENST00000410517 GDF2Q9UK05 429 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1140P-201ENST00000410517 KDM2AQ9Y2K7 1162 aa5.62□□□□□ -1.51
RNU6-1140P-201ENST00000410517 GATA4P43694 442 aa5.61□□□□□ -1.51
RNU6-1140P-201ENST00000410517 ZBTB33Q86T24 672 aa5.61□□□□□ -1.51
RNU6-1140P-201ENST00000410517 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
RNU6-1140P-201ENST00000410517 NUCKS1Q9H1E3 243 aaKnown RBP5.61□□□□□ -1.51
RNU6-1140P-201ENST00000410517 NUTM2BA6NNL0 878 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 NUTM2EB1AL46 878 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 HOXB4P17483 251 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 POU4F2Q12837 409 aa5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 DIXDC1Q155Q3 683 aa5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 NUTM2DQ5VT03 806 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 NUTM2AQ8IVF1 878 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 NOP53Q9NZM5 478 aaKnown RBP5.6□□□□□ -1.51
RNU6-1140P-201ENST00000410517 LILRA1O75019 489 aa5.59□□□□□ -1.51
RNU6-1140P-201ENST00000410517 COBLO75128 1261 aa5.59□□□□□ -1.51
RNU6-1140P-201ENST00000410517 RSPO4Q2I0M5 234 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1140P-201ENST00000410517 RIC3Q7Z5B4 369 aa5.59□□□□□ -1.51
RNU6-1140P-201ENST00000410517 GOLGA6L1Q8N7Z2 621 aa5.59□□□□□ -1.51
RNU6-1140P-201ENST00000410517 MEN1O00255 615 aa5.58□□□□□ -1.52
RNU6-1140P-201ENST00000410517 PDXDC2PQ6P474 469 aa5.58□□□□□ -1.52
RNU6-1140P-201ENST00000410517 CFHR5Q9BXR6 569 aa5.58□□□□□ -1.52
RNU6-1140P-201ENST00000410517 ERVH48-1M5A8F1 160 aa5.57□□□□□ -1.52
RNU6-1140P-201ENST00000410517 SLC27A3Q5K4L6 730 aa5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 NKAPLQ5M9Q1 402 aa5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 GIGYF2Q6Y7W6 1299 aaKnown RBP5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 HELBQ8NG08 1087 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 BTBD6Q96KE9 485 aa5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 PHF24Q9UPV7 400 aa5.56□□□□□ -1.52
RNU6-1140P-201ENST00000410517 F11P03951 625 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 GPC1P35052 558 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 QPCTQ16769 361 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 NBPF20Q3BBV1 942 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 NBPF10Q6P3W6 841 aaKnown RBP5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 NBPF15Q8N660 670 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 TIMMDC1Q9NPL8 285 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 CYLDQ9NQC7 956 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 GGA1Q9UJY5 639 aa5.55□□□□□ -1.52
RNU6-1140P-201ENST00000410517 DYRK3O43781 588 aa5.54□□□□□ -1.52
RNU6-1140P-201ENST00000410517 BMP4P12644 408 aa5.54□□□□□ -1.52
RNU6-1140P-201ENST00000410517 PRSS36Q5K4E3 855 aa5.54□□□□□ -1.52
RNU6-1140P-201ENST00000410517 SLCO4C1Q6ZQN7 724 aa5.54□□□□□ -1.52
RNU6-1140P-201ENST00000410517 ATP5J2-PTCD1G3V325 749 aa5.53□□□□□ -1.52
RNU6-1140P-201ENST00000410517 DGKGP49619 791 aa5.53□□□□□ -1.52
RNU6-1140P-201ENST00000410517 TPSG1Q9NRR2 321 aa5.53□□□□□ -1.52
RNU6-1140P-201ENST00000410517 FKBPLQ9UIM3 349 aa5.53□□□□□ -1.52
RNU6-1140P-201ENST00000410517 A0A1W2PRU2 124 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 EPXP11678 715 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 LRP8Q14114 963 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 TPRNQ4KMQ1 711 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 ADAM32Q8TC27 787 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 NLRP3Q96P20 1036 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 GPAMQ9HCL2 828 aa5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 ARID1BQ8NFD5 2236 aaPredicted RBP5.52□□□□□ -1.53
RNU6-1140P-201ENST00000410517 C2CD2LO14523 706 aa5.51□□□□□ -1.53
RNU6-1140P-201ENST00000410517 THBS1P07996 1170 aa5.51□□□□□ -1.53
RNU6-1140P-201ENST00000410517 PTK2Q05397 1052 aa5.51□□□□□ -1.53
RNU6-1140P-201ENST00000410517 RTL5Q5HYW3 569 aaPredicted RBP5.51□□□□□ -1.53
RNU6-1140P-201ENST00000410517 OCSTAMPQ9BR26 566 aa5.51□□□□□ -1.53
RNU6-1140P-201ENST00000410517 LIMD1Q9UGP4 676 aa5.51□□□□□ -1.53
RNU6-1140P-201ENST00000410517 HYAL3O43820 417 aaPredicted RBP5.5□□□□□ -1.53
RNU6-1140P-201ENST00000410517 LILRB3O75022 631 aa5.5□□□□□ -1.53
RNU6-1140P-201ENST00000410517 SPATA31C1P0DKV0 1188 aa5.5□□□□□ -1.53
RNU6-1140P-201ENST00000410517 RNF135Q8IUD6 432 aa5.5□□□□□ -1.53
RNU6-1140P-201ENST00000410517 GRIP2Q9C0E4 1043 aa5.5□□□□□ -1.53
RNU6-1140P-201ENST00000410517 NEURL1BA8MQ27 555 aa5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 SPATA31C2B4DYI2 1134 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms