RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 CC2D2BQ6DHV5 1058 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 CCDC155Q8N6L0 562 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 PRM3Q9NNZ6 103 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 SENP3-EIF4A1A0A087X0R7 540 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 SLC35F4A4IF30 521 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 MEN1O00255 615 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 VAC14Q08AM6 782 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 TSGA10IPQ3SY00 556 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 PRICKLE2Q7Z3G6 844 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 CCDC125Q86Z20 511 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 GPR161Q8N6U8 529 aaKnown RBP4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 ZNF592Q92610 1267 aa4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 CCDC85AQ96PX6 553 aaPredicted RBP4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 CDCA7Q9BWT1 371 aaPredicted RBP4.66□□□□□ -1.66
RNU2-54P-201ENST00000410299 TRAK2O60296 914 aa4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 RHOQP17081 205 aa4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 RNF144AP50876 292 aaPredicted RBP4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 EIF4G2P78344 907 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 LYSMD3Q7Z3D4 306 aa4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 KCTD17Q8N5Z5 321 aa4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 TRIM52Q96A61 297 aa4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 OSBPL3Q9H4L5 887 aa4.65□□□□□ -1.67
RNU2-54P-201ENST00000410299 ITGA6P23229 1130 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 KRT76Q01546 638 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 CYP2U1Q7Z449 544 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 VWA5B2Q8N398 1253 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 PHTF2Q8N3S3 785 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 NLRP3Q96P20 1036 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 ESF1Q9H501 851 aaKnown RBP4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 ARHGEF10LQ9HCE6 1279 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 RAB6BQ9NRW1 208 aa4.64□□□□□ -1.67
RNU2-54P-201ENST00000410299 CDC14CA4D256 554 aa4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 CLN3Q13286 438 aa4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 SLFNL1Q499Z3 407 aa4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 NANOS1Q8WY41 292 aaKnown RBP4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 POM121Q96HA1 1249 aa4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 CUEDC1Q9NWM3 386 aaPredicted RBP4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 COG6Q9Y2V7 657 aa4.63□□□□□ -1.67
RNU2-54P-201ENST00000410299 STAU1O95793 577 aaKnown RBP4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 MYCP01106 439 aaPredicted RBP4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 GPC1P35052 558 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 POU4F2Q12837 409 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 SLC27A3Q5K4L6 730 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 RNFT1Q5M7Z0 435 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 RNF135Q8IUD6 432 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 CNTNAP3BQ96NU0 1288 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 COL25A1Q9BXS0 654 aaPredicted RBP4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 CNTNAP3Q9BZ76 1288 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 GRIP2Q9C0E4 1043 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 DOLKQ9UPQ8 538 aa4.62□□□□□ -1.67
RNU2-54P-201ENST00000410299 GNRH1P01148 92 aa4.61□□□□□ -1.67
RNU2-54P-201ENST00000410299 IL2RAP01589 272 aa4.61□□□□□ -1.67
RNU2-54P-201ENST00000410299 WASHC4Q2M389 1173 aa4.61□□□□□ -1.67
RNU2-54P-201ENST00000410299 OXLD1Q5BKU9 147 aa4.61□□□□□ -1.67
RNU2-54P-201ENST00000410299 SV2AQ7L0J3 742 aa4.61□□□□□ -1.67
RNU2-54P-201ENST00000410299 CNKSR1Q969H4 720 aa4.61□□□□□ -1.67
RNU2-54P-201ENST00000410299 CENPCQ03188 943 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 KCNMA1Q12791 1236 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 USP4Q13107 963 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 SEMA3FQ13275 785 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 NBPF10Q6P3W6 841 aaKnown RBP4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 RIPOR1Q6ZS17 1223 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 TMEM151AQ8N4L1 468 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 NBPF15Q8N660 670 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 ESYT1Q9BSJ8 1104 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 CHIC2Q9UKJ5 165 aa4.6□□□□□ -1.67
RNU2-54P-201ENST00000410299 RNF225M0QZC1 329 aaPredicted RBP4.59□□□□□ -1.67
RNU2-54P-201ENST00000410299 PIK3CDO00329 1044 aa4.59□□□□□ -1.67
RNU2-54P-201ENST00000410299 XAGE2Q96GT9 111 aa4.59□□□□□ -1.67
RNU2-54P-201ENST00000410299 GAS2L1Q99501 681 aaPredicted RBP4.59□□□□□ -1.67
RNU2-54P-201ENST00000410299 HRH3Q9Y5N1 445 aa4.59□□□□□ -1.67
RNU2-54P-201ENST00000410299 SPATA31C2B4DYI2 1134 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 GDF11O95390 407 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 PHKA2P46019 1235 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 DBN1Q16643 649 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 TAS1R3Q7RTX0 852 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 PLPP7Q8NBV4 271 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 ZNF837Q96EG3 531 aaPredicted RBP4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 ETNK1Q9HBU6 452 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 TIMMDC1Q9NPL8 285 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 DYRK1BQ9Y463 629 aa4.58□□□□□ -1.68
RNU2-54P-201ENST00000410299 GPR25O00155 361 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 WASLO00401 505 aaPredicted RBP4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 RAD21O60216 631 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 UBTFP17480 764 aaKnown RBP4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 SOX11P35716 441 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 GAS6Q14393 721 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 MAP7D1Q3KQU3 841 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 TMEM214Q6NUQ4 689 aaKnown RBP4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 TRIM22Q8IYM9 498 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 WHAMMQ8TF30 809 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 GTPBP3Q969Y2 492 aaKnown RBP4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 ZSCAN10Q96SZ4 725 aaPredicted RBP4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 FHDC1Q9C0D6 1143 aaPredicted RBP4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 ALG2Q9H553 416 aa4.57□□□□□ -1.68
RNU2-54P-201ENST00000410299 POM121CA8CG34 1229 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 SCNN1DP51172 638 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 FLIIQ13045 1269 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 TMEM132AQ24JP5 1023 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms