RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SERF2-210ENST00000409960 TESK2Q96S53 571 aa16.54■□□□□ 0.24
SERF2-210ENST00000409960 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
SERF2-210ENST00000409960 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
SERF2-210ENST00000409960 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
SERF2-210ENST00000409960 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
SERF2-210ENST00000409960 AMPHP49418 695 aa16.53■□□□□ 0.24
SERF2-210ENST00000409960 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
SERF2-210ENST00000409960 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
SERF2-210ENST00000409960 ARXQ96QS3 562 aa16.53■□□□□ 0.24
SERF2-210ENST00000409960 RTL1A6NKG5 1358 aa16.52■□□□□ 0.24
SERF2-210ENST00000409960 ANKRD36BQ8N2N9 1353 aa16.52■□□□□ 0.24
SERF2-210ENST00000409960 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.24
SERF2-210ENST00000409960 HOXC9P31274 260 aa16.52■□□□□ 0.24
SERF2-210ENST00000409960 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
SERF2-210ENST00000409960 CHD4Q14839 1912 aa16.51■□□□□ 0.23
SERF2-210ENST00000409960 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
SERF2-210ENST00000409960 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
SERF2-210ENST00000409960 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
SERF2-210ENST00000409960 POLD1P28340 1107 aa16.49■□□□□ 0.23
SERF2-210ENST00000409960 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
SERF2-210ENST00000409960 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
SERF2-210ENST00000409960 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
SERF2-210ENST00000409960 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
SERF2-210ENST00000409960 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
SERF2-210ENST00000409960 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
SERF2-210ENST00000409960 TMF1P82094 1093 aa16.48■□□□□ 0.23
SERF2-210ENST00000409960 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
SERF2-210ENST00000409960 CDCA8Q53HL2 280 aa16.47■□□□□ 0.23
SERF2-210ENST00000409960 LY75O60449 1722 aa16.47■□□□□ 0.23
SERF2-210ENST00000409960 COL24A1Q17RW2 1714 aa16.46■□□□□ 0.23
SERF2-210ENST00000409960 SHANK3Q9BYB0 1731 aa16.46■□□□□ 0.23
SERF2-210ENST00000409960 TFCP2L1Q9NZI6 479 aa16.46■□□□□ 0.23
SERF2-210ENST00000409960 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.22
SERF2-210ENST00000409960 UTRNP46939 3433 aa16.45■□□□□ 0.22
SERF2-210ENST00000409960 MEGF6O75095 1541 aa16.45■□□□□ 0.22
SERF2-210ENST00000409960 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
SERF2-210ENST00000409960 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
SERF2-210ENST00000409960 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
SERF2-210ENST00000409960 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
SERF2-210ENST00000409960 USP47Q96K76 1375 aa16.44■□□□□ 0.22
SERF2-210ENST00000409960 FYB1O15117 783 aa16.44■□□□□ 0.22
SERF2-210ENST00000409960 DSG3P32926 999 aa16.44■□□□□ 0.22
SERF2-210ENST00000409960 NSD2O96028 1365 aa16.43■□□□□ 0.22
SERF2-210ENST00000409960 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
SERF2-210ENST00000409960 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 INSRP06213 1382 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
SERF2-210ENST00000409960 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
SERF2-210ENST00000409960 GPR162Q16538 588 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
SERF2-210ENST00000409960 FLT4P35916 1363 aa16.41■□□□□ 0.22
SERF2-210ENST00000409960 FBLN1P23142 703 aa16.41■□□□□ 0.22
SERF2-210ENST00000409960 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
SERF2-210ENST00000409960 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
SERF2-210ENST00000409960 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
SERF2-210ENST00000409960 KCNQ4P56696 695 aa16.38■□□□□ 0.21
SERF2-210ENST00000409960 POLA2Q14181 598 aa16.37■□□□□ 0.21
SERF2-210ENST00000409960 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
SERF2-210ENST00000409960 FLAD1Q8NFF5 587 aa16.37■□□□□ 0.21
SERF2-210ENST00000409960 C5P01031 1676 aa16.37■□□□□ 0.21
SERF2-210ENST00000409960 ABCB7O75027 752 aa16.36■□□□□ 0.21
SERF2-210ENST00000409960 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
SERF2-210ENST00000409960 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
SERF2-210ENST00000409960 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
SERF2-210ENST00000409960 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
SERF2-210ENST00000409960 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
SERF2-210ENST00000409960 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
SERF2-210ENST00000409960 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
SERF2-210ENST00000409960 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.21
SERF2-210ENST00000409960 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
SERF2-210ENST00000409960 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
SERF2-210ENST00000409960 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
SERF2-210ENST00000409960 C1QTNF8P60827 252 aa16.32■□□□□ 0.2
SERF2-210ENST00000409960 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
SERF2-210ENST00000409960 ANKRD26Q9UPS8 1709 aa16.32■□□□□ 0.2
SERF2-210ENST00000409960 ITGB4P16144 1822 aa16.31■□□□□ 0.2
SERF2-210ENST00000409960 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
SERF2-210ENST00000409960 CYP27B1O15528 508 aa16.31■□□□□ 0.2
SERF2-210ENST00000409960 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
SERF2-210ENST00000409960 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
SERF2-210ENST00000409960 CARD14Q9BXL6 1004 aa16.3■□□□□ 0.2
SERF2-210ENST00000409960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.27e-20■□□□□ 8.1
SERF2-210ENST00000409960 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
SERF2-210ENST00000409960 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
SERF2-210ENST00000409960 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
SERF2-210ENST00000409960 WASHC2AQ641Q2 1341 aa16.29■□□□□ 0.2
SERF2-210ENST00000409960 C4BP0C0L5 1744 aa16.29■□□□□ 0.2
SERF2-210ENST00000409960 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
SERF2-210ENST00000409960 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
SERF2-210ENST00000409960 AK7Q96M32 723 aa16.29■□□□□ 0.2
SERF2-210ENST00000409960 PLEKHG2Q9H7P9 1386 aa16.28■□□□□ 0.2
SERF2-210ENST00000409960 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
SERF2-210ENST00000409960 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
SERF2-210ENST00000409960 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
SERF2-210ENST00000409960 MAP2P11137 1827 aaKnown RBP16.28■□□□□ 0.2
SERF2-210ENST00000409960 MSL1Q68DK7 614 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms