RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 DDB1Q16531 1140 aa34.55■■■■□ 3.12
C2orf88-204ENST00000409870 USHBP1Q8N6Y0 703 aa34.55■■■■□ 3.12
C2orf88-204ENST00000409870 IGSF1Q8N6C5 1336 aa34.55■■■■□ 3.12
C2orf88-204ENST00000409870 APBA3O96018 575 aa34.55■■■■□ 3.12
C2orf88-204ENST00000409870 CFAP53Q96M91 514 aa34.55■■■■□ 3.12
C2orf88-204ENST00000409870 CAMKK2Q96RR4 588 aa34.54■■■■□ 3.12
C2orf88-204ENST00000409870 NUP188Q5SRE5 1749 aa34.53■■■■□ 3.12
C2orf88-204ENST00000409870 PSDA5PKW4 1024 aaPredicted RBP34.53■■■■□ 3.12
C2orf88-204ENST00000409870 DIAPH1O60610 1272 aaKnown RBP34.53■■■■□ 3.12
C2orf88-204ENST00000409870 IL2RBP14784 551 aa34.53■■■■□ 3.12
C2orf88-204ENST00000409870 MEGF6O75095 1541 aa34.52■■■■□ 3.12
C2orf88-204ENST00000409870 TNS2Q63HR2 1409 aa34.5■■■■□ 3.11
C2orf88-204ENST00000409870 RGPD3A6NKT7 1758 aaPredicted RBP34.49■■■■□ 3.11
C2orf88-204ENST00000409870 RGPD4Q7Z3J3 1758 aa34.49■■■■□ 3.11
C2orf88-204ENST00000409870 RAPGEF4Q8WZA2 1011 aa34.46■■■■□ 3.11
C2orf88-204ENST00000409870 KDRP35968 1356 aa34.46■■■■□ 3.11
C2orf88-204ENST00000409870 ANP32CO43423 234 aa34.45■■■■□ 3.11
C2orf88-204ENST00000409870 BCL9O00512 1426 aa34.43■■■■□ 3.1
C2orf88-204ENST00000409870 R3HDM1Q15032 1099 aaKnown RBP34.43■■■■□ 3.1
C2orf88-204ENST00000409870 SHANK3Q9BYB0 1731 aa34.43■■■■□ 3.1
C2orf88-204ENST00000409870 PKD1L3Q7Z443 1732 aa34.42■■■■□ 3.1
C2orf88-204ENST00000409870 PLEKHG2Q9H7P9 1386 aa34.41■■■■□ 3.1
C2orf88-204ENST00000409870 TATP17735 454 aaPredicted RBP34.41■■■■□ 3.1
C2orf88-204ENST00000409870 AEBP1Q8IUX7 1158 aa34.41■■■■□ 3.1
C2orf88-204ENST00000409870 MARCH10Q8NA82 808 aaPredicted RBP34.41■■■■□ 3.1
C2orf88-204ENST00000409870 EXOC5O00471 708 aa34.4■■■■□ 3.1
C2orf88-204ENST00000409870 SULT6B1Q6IMI4 303 aa34.4■■■■□ 3.1
C2orf88-204ENST00000409870 NUDCQ9Y266 331 aa34.38■■■■□ 3.09
C2orf88-204ENST00000409870 U2SURPO15042 1029 aaKnown RBP34.38■■■■□ 3.09
C2orf88-204ENST00000409870 HMOX1P09601 288 aa34.34■■■■□ 3.09
C2orf88-204ENST00000409870 ZCRB1Q8TBF4 217 aaKnown RBP34.34■■■■□ 3.09
C2orf88-204ENST00000409870 BCL11BQ9C0K0 894 aaPredicted RBP34.33■■■■□ 3.09
C2orf88-204ENST00000409870 NHSQ6T4R5 1651 aa34.33■■■■□ 3.09
C2orf88-204ENST00000409870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.31■■■■□ 3.08
C2orf88-204ENST00000409870 PLSCR1O15162 318 aa34.3■■■■□ 3.08
C2orf88-204ENST00000409870 NBPF14Q5TI25 921 aa34.3■■■■□ 3.08
C2orf88-204ENST00000409870 U2AF1L5P0DN76 240 aaPredicted RBP34.29■■■■□ 3.08
C2orf88-204ENST00000409870 U2AF1Q01081 240 aaKnown RBP eCLIP34.29■■■■□ 3.08
C2orf88-204ENST00000409870 PTF1AQ7RTS3 328 aa34.29■■■■□ 3.08
C2orf88-204ENST00000409870 PCDH11XQ9BZA7 1347 aa34.28■■■■□ 3.08
C2orf88-204ENST00000409870 PCDH11YQ9BZA8 1340 aa34.28■■■■□ 3.08
C2orf88-204ENST00000409870 SPG7Q9UQ90 795 aa34.27■■■■□ 3.08
C2orf88-204ENST00000409870 DDX54Q8TDD1 881 aaKnown RBP34.25■■■■□ 3.07
C2orf88-204ENST00000409870 RSPH6AQ9H0K4 717 aa34.25■■■■□ 3.07
C2orf88-204ENST00000409870 AMOTQ4VCS5 1084 aa34.22■■■■□ 3.07
C2orf88-204ENST00000409870 PLEKHO1Q53GL0 409 aaPredicted RBP34.22■■■■□ 3.07
C2orf88-204ENST00000409870 DIEXFQ68CQ4 756 aaKnown RBP34.22■■■■□ 3.07
C2orf88-204ENST00000409870 CYP27B1O15528 508 aa34.21■■■■□ 3.07
C2orf88-204ENST00000409870 FCHSD2O94868 740 aa34.21■■■■□ 3.07
C2orf88-204ENST00000409870 PRKAR2BP31323 418 aa34.2■■■■□ 3.06
C2orf88-204ENST00000409870 CCDC184Q52MB2 194 aa34.2■■■■□ 3.06
C2orf88-204ENST00000409870 DOT1LQ8TEK3 1739 aa34.18■■■■□ 3.06
C2orf88-204ENST00000409870 BTAF1O14981 1849 aa34.17■■■■□ 3.06
C2orf88-204ENST00000409870 PHKG2P15735 406 aa34.15■■■■□ 3.06
C2orf88-204ENST00000409870 WDR43Q15061 677 aaKnown RBP eCLIP34.15■■■■□ 3.06
C2orf88-204ENST00000409870 ZNF530Q6P9A1 599 aaPredicted RBP34.15■■■■□ 3.06
C2orf88-204ENST00000409870 IFNL2Q8IZJ0 200 aa34.15■■■■□ 3.06
C2orf88-204ENST00000409870 KCNQ2O43526 872 aa34.14■■■■□ 3.06
C2orf88-204ENST00000409870 ANO8Q9HCE9 1232 aaPredicted RBP34.14■■■■□ 3.06
C2orf88-204ENST00000409870 MRS2Q9HD23 443 aa34.14■■■■□ 3.06
C2orf88-204ENST00000409870 TOGARAM1Q9Y4F4 1720 aa34.14■■■■□ 3.06
C2orf88-204ENST00000409870 ACSBG1Q96GR2 724 aa34.13■■■■□ 3.05
C2orf88-204ENST00000409870 CASZ1Q86V15 1759 aa34.13■■■■□ 3.05
C2orf88-204ENST00000409870 NKX1-1Q15270 411 aaPredicted RBP34.13■■■■□ 3.05
C2orf88-204ENST00000409870 MTHFSDQ2M296 383 aaKnown RBP34.12■■■■□ 3.05
C2orf88-204ENST00000409870 PROM2Q8N271 834 aa34.12■■■■□ 3.05
C2orf88-204ENST00000409870 PHACTR3Q96KR7 559 aa34.11■■■■□ 3.05
C2orf88-204ENST00000409870 TXNRD1Q16881 649 aa34.1■■■■□ 3.05
C2orf88-204ENST00000409870 C1orf141Q5JVX7 400 aa34.09■■■■□ 3.05
C2orf88-204ENST00000409870 PLEKHF1Q96S99 279 aa34.09■■■■□ 3.05
C2orf88-204ENST00000409870 PNNQ9H307 717 aaKnown RBP34.09■■■■□ 3.05
C2orf88-204ENST00000409870 KAT6BQ8WYB5 2073 aa34.09■■■■□ 3.05
C2orf88-204ENST00000409870 GAS2L2Q8NHY3 880 aa34.08■■■■□ 3.05
C2orf88-204ENST00000409870 ADAMTS8Q9UP79 889 aa34.07■■■■□ 3.04
C2orf88-204ENST00000409870 HSP90AB1P08238 724 aaKnown RBP34.06■■■■□ 3.04
C2orf88-204ENST00000409870 AKAP4Q5JQC9 854 aa34.06■■■■□ 3.04
C2orf88-204ENST00000409870 PAPPAQ13219 1627 aa34.06■■■■□ 3.04
C2orf88-204ENST00000409870 KDM6AO15550 1401 aaPredicted RBP34.06■■■■□ 3.04
C2orf88-204ENST00000409870 ITGB4P16144 1822 aa34.05■■■■□ 3.04
C2orf88-204ENST00000409870 ADAMTS7Q9UKP4 1686 aa34.05■■■■□ 3.04
C2orf88-204ENST00000409870 PNISRQ8TF01 805 aaKnown RBP34.04■■■■□ 3.04
C2orf88-204ENST00000409870 SCN11AQ9UI33 1791 aa34.04■■■■□ 3.04
C2orf88-204ENST00000409870 VIRMAQ69YN4 1812 aaKnown RBP34.04■■■■□ 3.04
C2orf88-204ENST00000409870 NEFMP07197 916 aa34.04■■■■□ 3.04
C2orf88-204ENST00000409870 DCAF5Q96JK2 942 aa34.03■■■■□ 3.04
C2orf88-204ENST00000409870 SPON1Q9HCB6 807 aa34.02■■■■□ 3.04
C2orf88-204ENST00000409870 MAPK8IP3Q9UPT6 1336 aa34.02■■■■□ 3.04
C2orf88-204ENST00000409870 MAP3K5Q99683 1374 aa34.02■■■■□ 3.04
C2orf88-204ENST00000409870 STK32BQ9NY57 414 aa34.01■■■■□ 3.03
C2orf88-204ENST00000409870 PRIM1P49642 420 aaKnown RBP34■■■■□ 3.03
C2orf88-204ENST00000409870 CCER2I3L3R5 266 aa33.99■■■■□ 3.03
C2orf88-204ENST00000409870 DLG5Q8TDM6 1919 aa33.99■■■■□ 3.03
C2orf88-204ENST00000409870 MPRIPQ6WCQ1 1025 aa33.98■■■■□ 3.03
C2orf88-204ENST00000409870 SYTL4Q96C24 671 aaPredicted RBP33.97■■■■□ 3.03
C2orf88-204ENST00000409870 GNAT3A8MTJ3 354 aa33.96■■■■□ 3.03
C2orf88-204ENST00000409870 CCDC146Q8IYE0 955 aa33.96■■■■□ 3.03
C2orf88-204ENST00000409870 RUNDC1Q96C34 613 aa33.96■■■■□ 3.03
C2orf88-204ENST00000409870 SLC15A2Q16348 729 aa33.96■■■■□ 3.03
C2orf88-204ENST00000409870 MRC1P22897 1456 aa33.95■■■■□ 3.03
C2orf88-204ENST00000409870 ERVV-2B6SEH9 535 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms