RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 IL16Q14005 1332 aa25.75■■□□□ 1.71
PGAP1-204ENST00000409475 MEGF6O75095 1541 aa25.75■■□□□ 1.71
PGAP1-204ENST00000409475 HTATSF1O43719 755 aaKnown RBP25.74■■□□□ 1.71
PGAP1-204ENST00000409475 TATP17735 454 aaPredicted RBP25.74■■□□□ 1.71
PGAP1-204ENST00000409475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.74■■□□□ 1.711e-6■■■■□ 20.9
PGAP1-204ENST00000409475 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.74■■□□□ 1.71
PGAP1-204ENST00000409475 SLFN5Q08AF3 891 aa25.74■■□□□ 1.71
PGAP1-204ENST00000409475 E9PSI1 815 aa25.73■■□□□ 1.71
PGAP1-204ENST00000409475 TRMT2AQ8IZ69 625 aaKnown RBP25.73■■□□□ 1.71
PGAP1-204ENST00000409475 CDCA7LQ96GN5 454 aa25.73■■□□□ 1.71
PGAP1-204ENST00000409475 WNK3Q9BYP7 1800 aa25.72■■□□□ 1.71
PGAP1-204ENST00000409475 OVOS2A0A0G2JMS6 1433 aa25.72■■□□□ 1.71
PGAP1-204ENST00000409475 CALD1Q05682 793 aaKnown RBP25.72■■□□□ 1.71
PGAP1-204ENST00000409475 MAP3K5Q99683 1374 aa25.71■■□□□ 1.71
PGAP1-204ENST00000409475 LRRC37A3O60309 1634 aa25.7■■□□□ 1.71
PGAP1-204ENST00000409475 FNBP4Q8N3X1 1017 aaPredicted RBP25.7■■□□□ 1.7
PGAP1-204ENST00000409475 GNAT3A8MTJ3 354 aa25.69■■□□□ 1.7
PGAP1-204ENST00000409475 SPG7Q9UQ90 795 aa25.68■■□□□ 1.7
PGAP1-204ENST00000409475 DUSP27Q5VZP5 1158 aa25.68■■□□□ 1.7
PGAP1-204ENST00000409475 AKAP4Q5JQC9 854 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 NGLY1Q96IV0 654 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 DISP2A7MBM2 1401 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 BCL9LQ86UU0 1499 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 IL2RBP14784 551 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 UNC5CLQ8IV45 518 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 FBXO41Q8TF61 875 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 RTF1Q92541 710 aaKnown RBP25.67■■□□□ 1.7
PGAP1-204ENST00000409475 C8orf37Q96NL8 207 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 SPINK5Q9NQ38 1064 aaPredicted RBP25.67■■□□□ 1.7
PGAP1-204ENST00000409475 ADAMTS7Q9UKP4 1686 aa25.67■■□□□ 1.7
PGAP1-204ENST00000409475 ZNF530Q6P9A1 599 aaPredicted RBP25.66■■□□□ 1.7
PGAP1-204ENST00000409475 MYH16Q9H6N6 1097 aa25.66■■□□□ 1.7
PGAP1-204ENST00000409475 THRAP3Q9Y2W1 955 aaKnown RBP25.66■■□□□ 1.7
PGAP1-204ENST00000409475 SPATA31A1Q5TZJ5 1347 aa25.65■■□□□ 1.7
PGAP1-204ENST00000409475 SHANK3Q9BYB0 1731 aa25.64■■□□□ 1.7
PGAP1-204ENST00000409475 VIRMAQ69YN4 1812 aaKnown RBP25.64■■□□□ 1.69
PGAP1-204ENST00000409475 MEX3CQ5U5Q3 659 aaKnown RBP25.64■■□□□ 1.69
PGAP1-204ENST00000409475 SPATA31A5Q5VU36 1347 aa25.64■■□□□ 1.69
PGAP1-204ENST00000409475 SPATA31A7Q8IWB4 1347 aa25.64■■□□□ 1.69
PGAP1-204ENST00000409475 C1orf141Q5JVX7 400 aa25.63■■□□□ 1.69
PGAP1-204ENST00000409475 IFT57Q9NWB7 429 aa25.63■■□□□ 1.69
PGAP1-204ENST00000409475 VPS72Q15906 364 aa25.62■■□□□ 1.69
PGAP1-204ENST00000409475 THUMPD2Q9BTF0 503 aaKnown RBP25.62■■□□□ 1.69
PGAP1-204ENST00000409475 ZNF853P0CG23 659 aa25.61■■□□□ 1.69
PGAP1-204ENST00000409475 GNAI1P63096 354 aa25.61■■□□□ 1.69
PGAP1-204ENST00000409475 DCTN1Q14203 1278 aa25.61■■□□□ 1.69
PGAP1-204ENST00000409475 MCM10Q7L590 875 aa25.61■■□□□ 1.69
PGAP1-204ENST00000409475 CDCA7Q9BWT1 371 aaPredicted RBP25.61■■□□□ 1.69
PGAP1-204ENST00000409475 CEMIPQ8WUJ3 1361 aa25.61■■□□□ 1.69
PGAP1-204ENST00000409475 ZCRB1Q8TBF4 217 aaKnown RBP25.59■■□□□ 1.69
PGAP1-204ENST00000409475 SCN11AQ9UI33 1791 aa25.59■■□□□ 1.69
PGAP1-204ENST00000409475 PCDH11XQ9BZA7 1347 aa25.59■■□□□ 1.69
PGAP1-204ENST00000409475 PCDH11YQ9BZA8 1340 aa25.59■■□□□ 1.69
PGAP1-204ENST00000409475 IFNL2Q8IZJ0 200 aa25.59■■□□□ 1.69
PGAP1-204ENST00000409475 CFAP44Q96MT7 982 aa25.59■■□□□ 1.69
PGAP1-204ENST00000409475 PHKG2P15735 406 aa25.58■■□□□ 1.69
PGAP1-204ENST00000409475 IL17REQ8NFR9 667 aa25.58■■□□□ 1.69
PGAP1-204ENST00000409475 USP35Q9P2H5 1018 aa25.58■■□□□ 1.69
PGAP1-204ENST00000409475 USP21Q9UK80 565 aa25.58■■□□□ 1.69
PGAP1-204ENST00000409475 BARGINQ6ZT62 677 aa25.58■■□□□ 1.69
PGAP1-204ENST00000409475 FANCIQ9NVI1 1328 aa25.57■■□□□ 1.68
PGAP1-204ENST00000409475 HSP90AB1P08238 724 aaKnown RBP25.56■■□□□ 1.68
PGAP1-204ENST00000409475 BABAM1Q9NWV8 329 aa25.56■■□□□ 1.68
PGAP1-204ENST00000409475 AFF2P51816 1311 aa25.55■■□□□ 1.68
PGAP1-204ENST00000409475 SIPA1L3O60292 1781 aaPredicted RBP25.55■■□□□ 1.68
PGAP1-204ENST00000409475 CYP27B1O15528 508 aa25.55■■□□□ 1.68
PGAP1-204ENST00000409475 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
PGAP1-204ENST00000409475 TNS2Q63HR2 1409 aa25.54■■□□□ 1.68
PGAP1-204ENST00000409475 CHL1O00533 1208 aa25.54■■□□□ 1.68
PGAP1-204ENST00000409475 KDM6AO15550 1401 aaPredicted RBP25.53■■□□□ 1.68
PGAP1-204ENST00000409475 ATRNO75882 1429 aa25.53■■□□□ 1.68
PGAP1-204ENST00000409475 MRC1P22897 1456 aa25.53■■□□□ 1.68
PGAP1-204ENST00000409475 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
PGAP1-204ENST00000409475 TSR2Q969E8 191 aaKnown RBP25.52■■□□□ 1.68
PGAP1-204ENST00000409475 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
PGAP1-204ENST00000409475 CCDC9Q9Y3X0 531 aaKnown RBP25.52■■□□□ 1.68
PGAP1-204ENST00000409475 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
PGAP1-204ENST00000409475 DCAF5Q96JK2 942 aa25.52■■□□□ 1.68
PGAP1-204ENST00000409475 LAS1LQ9Y4W2 734 aaKnown RBP25.52■■□□□ 1.68
PGAP1-204ENST00000409475 CT47B1P0C2W7 299 aaPredicted RBP25.51■■□□□ 1.67
PGAP1-204ENST00000409475 MBIPQ9NS73 344 aa25.51■■□□□ 1.67
PGAP1-204ENST00000409475 TAF7Q15545 349 aaPredicted RBP25.51■■□□□ 1.67
PGAP1-204ENST00000409475 KDM3BQ7LBC6 1761 aa25.5■■□□□ 1.67
PGAP1-204ENST00000409475 RCAN3Q9UKA8 241 aa25.49■■□□□ 1.67
PGAP1-204ENST00000409475 GLI3P10071 1580 aa25.49■■□□□ 1.67
PGAP1-204ENST00000409475 THSD7AQ9UPZ6 1657 aa25.48■■□□□ 1.67
PGAP1-204ENST00000409475 EXOC5O00471 708 aa25.48■■□□□ 1.67
PGAP1-204ENST00000409475 TEFQ10587 303 aa25.48■■□□□ 1.67
PGAP1-204ENST00000409475 TRPC5Q9UL62 973 aaPredicted RBP25.47■■□□□ 1.67
PGAP1-204ENST00000409475 EXOSC9Q06265 439 aaKnown RBP25.46■■□□□ 1.67
PGAP1-204ENST00000409475 TSPYL4Q9UJ04 414 aa25.45■■□□□ 1.67
PGAP1-204ENST00000409475 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
PGAP1-204ENST00000409475 GJD4Q96KN9 370 aaPredicted RBP25.44■■□□□ 1.66
PGAP1-204ENST00000409475 DDB1Q16531 1140 aa25.44■■□□□ 1.66
PGAP1-204ENST00000409475 SLC52A2Q9HAB3 445 aa25.44■■□□□ 1.66
PGAP1-204ENST00000409475 TOGARAM1Q9Y4F4 1720 aa25.43■■□□□ 1.66
PGAP1-204ENST00000409475 RNF123Q5XPI4 1314 aa25.43■■□□□ 1.66
PGAP1-204ENST00000409475 ERVV-2B6SEH9 535 aa25.43■■□□□ 1.66
PGAP1-204ENST00000409475 SUPT16HQ9Y5B9 1047 aaKnown RBP25.42■■□□□ 1.66
PGAP1-204ENST00000409475 FAM98CQ17RN3 349 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms