RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
SNORD88C-201ENST00000408061 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
SNORD88C-201ENST00000408061 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
SNORD88C-201ENST00000408061 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
SNORD88C-201ENST00000408061 COL22A1Q8NFW1 1626 aaPredicted RBP13.28□□□□□ -0.28
SNORD88C-201ENST00000408061 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 KIF16BQ96L93 1317 aa13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 CRB1P82279 1406 aa13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 ABCA3Q99758 1704 aa13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 RGPD2P0DJD1 1756 aa13.27□□□□□ -0.29
SNORD88C-201ENST00000408061 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 IRX6P78412 446 aaPredicted RBP13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 TAF7Q15545 349 aaPredicted RBP13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
SNORD88C-201ENST00000408061 WDR17Q8IZU2 1322 aa13.25□□□□□ -0.29
SNORD88C-201ENST00000408061 VAMP4O75379 141 aa13.25□□□□□ -0.29
SNORD88C-201ENST00000408061 BCAR3O75815 825 aa13.25□□□□□ -0.29
SNORD88C-201ENST00000408061 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
SNORD88C-201ENST00000408061 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
SNORD88C-201ENST00000408061 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
SNORD88C-201ENST00000408061 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
SNORD88C-201ENST00000408061 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
SNORD88C-201ENST00000408061 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
SNORD88C-201ENST00000408061 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
SNORD88C-201ENST00000408061 ZKSCAN2Q63HK3 967 aa13.24□□□□□ -0.29
SNORD88C-201ENST00000408061 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
SNORD88C-201ENST00000408061 HSP90AB1P08238 724 aaKnown RBP13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 MCM10Q7L590 875 aa13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 CCDC136Q96JN2 1154 aa13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
SNORD88C-201ENST00000408061 CACNA1FO60840 1977 aa13.22□□□□□ -0.29
SNORD88C-201ENST00000408061 PLIN1O60240 522 aa13.22□□□□□ -0.29
SNORD88C-201ENST00000408061 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
SNORD88C-201ENST00000408061 IL17REQ8NFR9 667 aa13.22□□□□□ -0.29
SNORD88C-201ENST00000408061 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
SNORD88C-201ENST00000408061 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
SNORD88C-201ENST00000408061 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
SNORD88C-201ENST00000408061 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.29
SNORD88C-201ENST00000408061 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
SNORD88C-201ENST00000408061 PHLPP1O60346 1717 aa13.21□□□□□ -0.3
SNORD88C-201ENST00000408061 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.3
SNORD88C-201ENST00000408061 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
SNORD88C-201ENST00000408061 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 HOXB7P09629 217 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 EVA1CP58658 441 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 TEFQ10587 303 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 ATF7IPQ6VMQ6 1270 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
SNORD88C-201ENST00000408061 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
SNORD88C-201ENST00000408061 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
SNORD88C-201ENST00000408061 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
SNORD88C-201ENST00000408061 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
SNORD88C-201ENST00000408061 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
SNORD88C-201ENST00000408061 FTSJ3Q8IY81 847 aaKnown RBP13.17□□□□□ -0.3
SNORD88C-201ENST00000408061 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
SNORD88C-201ENST00000408061 PTPRCP08575 1304 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 IL2RBP14784 551 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 PHKG2P15735 406 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
SNORD88C-201ENST00000408061 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
SNORD88C-201ENST00000408061 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
SNORD88C-201ENST00000408061 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
SNORD88C-201ENST00000408061 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
SNORD88C-201ENST00000408061 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
SNORD88C-201ENST00000408061 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 TRIM27P14373 513 aa13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 SIPA1L3O60292 1781 aaPredicted RBP13.14□□□□□ -0.31
SNORD88C-201ENST00000408061 MEGF6O75095 1541 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms