RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 TRIM35Q9UPQ4 493 aa25.8■■□□□ 1.72
SMTN-204ENST00000404574 PLEKHG2Q9H7P9 1386 aa25.8■■□□□ 1.72
SMTN-204ENST00000404574 IL2RBP14784 551 aa25.8■■□□□ 1.72
SMTN-204ENST00000404574 GOLGA2Q08379 1002 aa25.8■■□□□ 1.72
SMTN-204ENST00000404574 SPG7Q9UQ90 795 aa25.8■■□□□ 1.72
SMTN-204ENST00000404574 CCDC9Q9Y3X0 531 aaKnown RBP25.8■■□□□ 1.72
SMTN-204ENST00000404574 USP21Q9UK80 565 aa25.79■■□□□ 1.72
SMTN-204ENST00000404574 WDR63Q8IWG1 891 aa25.78■■□□□ 1.72
SMTN-204ENST00000404574 RTF1Q92541 710 aaKnown RBP25.78■■□□□ 1.72
SMTN-204ENST00000404574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.72
SMTN-204ENST00000404574 MEGF6O75095 1541 aa25.78■■□□□ 1.72
SMTN-204ENST00000404574 NRAPQ86VF7 1730 aa25.78■■□□□ 1.72
SMTN-204ENST00000404574 ZNF530Q6P9A1 599 aaPredicted RBP25.77■■□□□ 1.72
SMTN-204ENST00000404574 BCL9LQ86UU0 1499 aa25.77■■□□□ 1.72
SMTN-204ENST00000404574 SPATA31A1Q5TZJ5 1347 aa25.76■■□□□ 1.71
SMTN-204ENST00000404574 GNAT3A8MTJ3 354 aa25.76■■□□□ 1.71
SMTN-204ENST00000404574 C1orf141Q5JVX7 400 aa25.76■■□□□ 1.71
SMTN-204ENST00000404574 THRAP3Q9Y2W1 955 aaKnown RBP25.76■■□□□ 1.71
SMTN-204ENST00000404574 HTATSF1O43719 755 aaKnown RBP25.75■■□□□ 1.71
SMTN-204ENST00000404574 CALD1Q05682 793 aaKnown RBP25.75■■□□□ 1.71
SMTN-204ENST00000404574 AFF2P51816 1311 aa25.75■■□□□ 1.71
SMTN-204ENST00000404574 SPATA31A5Q5VU36 1347 aa25.75■■□□□ 1.71
SMTN-204ENST00000404574 SPATA31A7Q8IWB4 1347 aa25.75■■□□□ 1.71
SMTN-204ENST00000404574 VPS72Q15906 364 aa25.74■■□□□ 1.71
SMTN-204ENST00000404574 OVOS2A0A0G2JMS6 1433 aa25.74■■□□□ 1.71
SMTN-204ENST00000404574 AKAP4Q5JQC9 854 aa25.74■■□□□ 1.71
SMTN-204ENST00000404574 CDCA7LQ96GN5 454 aa25.74■■□□□ 1.71
SMTN-204ENST00000404574 MAP3K5Q99683 1374 aa25.74■■□□□ 1.71
SMTN-204ENST00000404574 ZCRB1Q8TBF4 217 aaKnown RBP25.72■■□□□ 1.71
SMTN-204ENST00000404574 E9PSI1 815 aa25.71■■□□□ 1.71
SMTN-204ENST00000404574 CDCA7Q9BWT1 371 aaPredicted RBP25.71■■□□□ 1.71
SMTN-204ENST00000404574 DCTN1Q14203 1278 aa25.71■■□□□ 1.71
SMTN-204ENST00000404574 MCM10Q7L590 875 aa25.71■■□□□ 1.71
SMTN-204ENST00000404574 DLG5Q8TDM6 1919 aa25.71■■□□□ 1.71
SMTN-204ENST00000404574 PARP4Q9UKK3 1724 aaKnown RBP25.7■■□□□ 1.71
SMTN-204ENST00000404574 THUMPD2Q9BTF0 503 aaKnown RBP25.7■■□□□ 1.7
SMTN-204ENST00000404574 IL16Q14005 1332 aa25.7■■□□□ 1.7
SMTN-204ENST00000404574 SLFN5Q08AF3 891 aa25.69■■□□□ 1.7
SMTN-204ENST00000404574 IFNL2Q8IZJ0 200 aa25.68■■□□□ 1.7
SMTN-204ENST00000404574 BARGINQ6ZT62 677 aa25.68■■□□□ 1.7
SMTN-204ENST00000404574 PCDH11XQ9BZA7 1347 aa25.68■■□□□ 1.7
SMTN-204ENST00000404574 PCDH11YQ9BZA8 1340 aa25.68■■□□□ 1.7
SMTN-204ENST00000404574 MYH16Q9H6N6 1097 aa25.67■■□□□ 1.7
SMTN-204ENST00000404574 TRPC5Q9UL62 973 aaPredicted RBP25.67■■□□□ 1.7
SMTN-204ENST00000404574 DISP2A7MBM2 1401 aa25.67■■□□□ 1.7
SMTN-204ENST00000404574 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.67■■□□□ 1.7
SMTN-204ENST00000404574 PHKG2P15735 406 aa25.66■■□□□ 1.7
SMTN-204ENST00000404574 SPINK5Q9NQ38 1064 aaPredicted RBP25.66■■□□□ 1.7
SMTN-204ENST00000404574 EXOC5O00471 708 aa25.66■■□□□ 1.7
SMTN-204ENST00000404574 PKD1L3Q7Z443 1732 aa25.65■■□□□ 1.7
SMTN-204ENST00000404574 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
SMTN-204ENST00000404574 IL17REQ8NFR9 667 aa25.65■■□□□ 1.7
SMTN-204ENST00000404574 LAS1LQ9Y4W2 734 aaKnown RBP25.65■■□□□ 1.7
SMTN-204ENST00000404574 CYP27B1O15528 508 aa25.64■■□□□ 1.7
SMTN-204ENST00000404574 MPRIPQ6WCQ1 1025 aa25.64■■□□□ 1.7
SMTN-204ENST00000404574 DDX54Q8TDD1 881 aaKnown RBP25.64■■□□□ 1.7
SMTN-204ENST00000404574 GNAI1P63096 354 aa25.63■■□□□ 1.69
SMTN-204ENST00000404574 DUSP27Q5VZP5 1158 aa25.63■■□□□ 1.69
SMTN-204ENST00000404574 IFT57Q9NWB7 429 aa25.63■■□□□ 1.69
SMTN-204ENST00000404574 TRMT2AQ8IZ69 625 aaKnown RBP25.63■■□□□ 1.69
SMTN-204ENST00000404574 GJD4Q96KN9 370 aaPredicted RBP25.63■■□□□ 1.69
SMTN-204ENST00000404574 FAM98CQ17RN3 349 aaKnown RBP25.62■■□□□ 1.69
SMTN-204ENST00000404574 CFAP44Q96MT7 982 aa25.62■■□□□ 1.69
SMTN-204ENST00000404574 QTRT2Q9H974 415 aaKnown RBP25.62■■□□□ 1.69
SMTN-204ENST00000404574 LGR6Q9HBX8 967 aa25.62■■□□□ 1.69
SMTN-204ENST00000404574 RNMTO43148 476 aaKnown RBP25.61■■□□□ 1.69
SMTN-204ENST00000404574 DCAF5Q96JK2 942 aa25.61■■□□□ 1.69
SMTN-204ENST00000404574 DDB1Q16531 1140 aa25.6■■□□□ 1.69
SMTN-204ENST00000404574 ATRNO75882 1429 aa25.6■■□□□ 1.69
SMTN-204ENST00000404574 CEMIPQ8WUJ3 1361 aa25.6■■□□□ 1.69
SMTN-204ENST00000404574 TEFQ10587 303 aa25.6■■□□□ 1.69
SMTN-204ENST00000404574 ZNF772Q68DY9 489 aaPredicted RBP25.6■■□□□ 1.69
SMTN-204ENST00000404574 A0A0G2JS52 829 aa25.58■■□□□ 1.69
SMTN-204ENST00000404574 MYT1Q01538 1121 aa25.58■■□□□ 1.69
SMTN-204ENST00000404574 ZNF853P0CG23 659 aa25.57■■□□□ 1.68
SMTN-204ENST00000404574 TSR2Q969E8 191 aaKnown RBP25.57■■□□□ 1.68
SMTN-204ENST00000404574 WNK3Q9BYP7 1800 aa25.57■■□□□ 1.68
SMTN-204ENST00000404574 FANCIQ9NVI1 1328 aa25.57■■□□□ 1.68
SMTN-204ENST00000404574 TNS2Q63HR2 1409 aa25.57■■□□□ 1.68
SMTN-204ENST00000404574 TAF7Q15545 349 aaPredicted RBP25.57■■□□□ 1.68
SMTN-204ENST00000404574 NKX1-1Q15270 411 aaPredicted RBP25.56■■□□□ 1.68
SMTN-204ENST00000404574 CHL1O00533 1208 aa25.55■■□□□ 1.68
SMTN-204ENST00000404574 MBIPQ9NS73 344 aa25.55■■□□□ 1.68
SMTN-204ENST00000404574 BABAM1Q9NWV8 329 aa25.54■■□□□ 1.68
SMTN-204ENST00000404574 TSPYL4Q9UJ04 414 aa25.54■■□□□ 1.68
SMTN-204ENST00000404574 KDM6AO15550 1401 aaPredicted RBP25.53■■□□□ 1.68
SMTN-204ENST00000404574 LRRC37A3O60309 1634 aa25.52■■□□□ 1.68
SMTN-204ENST00000404574 SLC52A2Q9HAB3 445 aa25.51■■□□□ 1.68
SMTN-204ENST00000404574 MIS18AQ9NYP9 233 aa25.51■■□□□ 1.68
SMTN-204ENST00000404574 GLI3P10071 1580 aa25.51■■□□□ 1.67
SMTN-204ENST00000404574 SHANK3Q9BYB0 1731 aa25.51■■□□□ 1.67
SMTN-204ENST00000404574 ERVV-2B6SEH9 535 aa25.5■■□□□ 1.67
SMTN-204ENST00000404574 ONECUT3O60422 494 aaPredicted RBP25.5■■□□□ 1.67
SMTN-204ENST00000404574 CABP4P57796 275 aa25.5■■□□□ 1.67
SMTN-204ENST00000404574 BTBD11A6QL63 1104 aa25.49■■□□□ 1.67
SMTN-204ENST00000404574 EXOSC9Q06265 439 aaKnown RBP25.49■■□□□ 1.67
SMTN-204ENST00000404574 ADAMTS7Q9UKP4 1686 aa25.49■■□□□ 1.67
SMTN-204ENST00000404574 NFATC2IPQ8NCF5 419 aa25.49■■□□□ 1.67
SMTN-204ENST00000404574 SCN11AQ9UI33 1791 aa25.48■■□□□ 1.67
SMTN-204ENST00000404574 RCAN3Q9UKA8 241 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms