RNA–Protein interactions for RNA: ENST00000404276.5

CHEK2-208, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-208ENST00000404276 WNK3Q9BYP7 1800 aa13.74□□□□□ -0.21
CHEK2-208ENST00000404276 PKD1L3Q7Z443 1732 aa13.74□□□□□ -0.21
CHEK2-208ENST00000404276 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
CHEK2-208ENST00000404276 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
CHEK2-208ENST00000404276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.212e-7■■□□□ 13.1
CHEK2-208ENST00000404276 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
CHEK2-208ENST00000404276 CCDC9Q9Y3X0 531 aaKnown RBP13.73□□□□□ -0.21
CHEK2-208ENST00000404276 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
CHEK2-208ENST00000404276 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
CHEK2-208ENST00000404276 BARGINQ6ZT62 677 aa13.73□□□□□ -0.21
CHEK2-208ENST00000404276 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
CHEK2-208ENST00000404276 DLG5Q8TDM6 1919 aa13.73□□□□□ -0.21
CHEK2-208ENST00000404276 GLI3P10071 1580 aa13.72□□□□□ -0.21
CHEK2-208ENST00000404276 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
CHEK2-208ENST00000404276 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
CHEK2-208ENST00000404276 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
CHEK2-208ENST00000404276 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
CHEK2-208ENST00000404276 ZBED9Q6R2W3 1325 aa13.71□□□□□ -0.21
CHEK2-208ENST00000404276 RIPK4P57078 832 aa13.71□□□□□ -0.21
CHEK2-208ENST00000404276 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
CHEK2-208ENST00000404276 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
CHEK2-208ENST00000404276 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
CHEK2-208ENST00000404276 ZNF521Q96K83 1311 aa13.71□□□□□ -0.22
CHEK2-208ENST00000404276 CCDC27Q2M243 656 aa13.71□□□□□ -0.22
CHEK2-208ENST00000404276 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.22
CHEK2-208ENST00000404276 QTRT2Q9H974 415 aaKnown RBP13.71□□□□□ -0.22
CHEK2-208ENST00000404276 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-208ENST00000404276 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
CHEK2-208ENST00000404276 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
CHEK2-208ENST00000404276 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
CHEK2-208ENST00000404276 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
CHEK2-208ENST00000404276 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
CHEK2-208ENST00000404276 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
CHEK2-208ENST00000404276 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
CHEK2-208ENST00000404276 CYP27B1O15528 508 aa13.68□□□□□ -0.22
CHEK2-208ENST00000404276 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
CHEK2-208ENST00000404276 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
CHEK2-208ENST00000404276 THSD7AQ9UPZ6 1657 aa13.68□□□□□ -0.22
CHEK2-208ENST00000404276 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
CHEK2-208ENST00000404276 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
CHEK2-208ENST00000404276 TNS2Q63HR2 1409 aa13.68□□□□□ -0.22
CHEK2-208ENST00000404276 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
CHEK2-208ENST00000404276 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
CHEK2-208ENST00000404276 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
CHEK2-208ENST00000404276 PHKG2P15735 406 aa13.67□□□□□ -0.22
CHEK2-208ENST00000404276 EP400Q96L91 3159 aa13.67□□□□□ -0.22
CHEK2-208ENST00000404276 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
CHEK2-208ENST00000404276 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 ADAMTS7Q9UKP4 1686 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 EXOC5O00471 708 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 DDB1Q16531 1140 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
CHEK2-208ENST00000404276 MCM10Q7L590 875 aa13.65□□□□□ -0.22
CHEK2-208ENST00000404276 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
CHEK2-208ENST00000404276 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
CHEK2-208ENST00000404276 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
CHEK2-208ENST00000404276 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
CHEK2-208ENST00000404276 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
CHEK2-208ENST00000404276 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
CHEK2-208ENST00000404276 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
CHEK2-208ENST00000404276 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
CHEK2-208ENST00000404276 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
CHEK2-208ENST00000404276 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
CHEK2-208ENST00000404276 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
CHEK2-208ENST00000404276 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
CHEK2-208ENST00000404276 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
CHEK2-208ENST00000404276 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
CHEK2-208ENST00000404276 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
CHEK2-208ENST00000404276 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
CHEK2-208ENST00000404276 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
CHEK2-208ENST00000404276 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
CHEK2-208ENST00000404276 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
CHEK2-208ENST00000404276 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
CHEK2-208ENST00000404276 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
CHEK2-208ENST00000404276 IL16Q14005 1332 aa13.62□□□□□ -0.23
CHEK2-208ENST00000404276 PDE3BQ13370 1112 aa13.61□□□□□ -0.23
CHEK2-208ENST00000404276 A0A0G2JS52 829 aa13.6□□□□□ -0.23
CHEK2-208ENST00000404276 MYT1Q01538 1121 aa13.6□□□□□ -0.23
CHEK2-208ENST00000404276 MRC1P22897 1456 aa13.6□□□□□ -0.23
CHEK2-208ENST00000404276 ZNF853P0CG23 659 aa13.6□□□□□ -0.23
CHEK2-208ENST00000404276 RXRBP28702 533 aa13.6□□□□□ -0.23
CHEK2-208ENST00000404276 CALD1Q05682 793 aaKnown RBP13.6□□□□□ -0.23
CHEK2-208ENST00000404276 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
CHEK2-208ENST00000404276 TOGARAM1Q9Y4F4 1720 aa13.59□□□□□ -0.23
CHEK2-208ENST00000404276 TRMT2AQ8IZ69 625 aaKnown RBP13.59□□□□□ -0.23
CHEK2-208ENST00000404276 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
CHEK2-208ENST00000404276 E9PSI1 815 aa13.58□□□□□ -0.23
CHEK2-208ENST00000404276 CFAP44Q96MT7 982 aa13.58□□□□□ -0.23
CHEK2-208ENST00000404276 IFT57Q9NWB7 429 aa13.58□□□□□ -0.23
CHEK2-208ENST00000404276 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
CHEK2-208ENST00000404276 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
CHEK2-208ENST00000404276 CHL1O00533 1208 aa13.58□□□□□ -0.24
CHEK2-208ENST00000404276 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
CHEK2-208ENST00000404276 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.24
CHEK2-208ENST00000404276 GNAI1P63096 354 aa13.57□□□□□ -0.24
CHEK2-208ENST00000404276 TEFQ10587 303 aa13.57□□□□□ -0.24
CHEK2-208ENST00000404276 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms