RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
HPS4-203ENST00000402105 TSPYL4Q9UJ04 414 aa11.17□□□□□ -0.62
HPS4-203ENST00000402105 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
HPS4-203ENST00000402105 CWC22Q9HCG8 908 aaKnown RBP11.17□□□□□ -0.62
HPS4-203ENST00000402105 PALD1Q9ULE6 856 aa11.17□□□□□ -0.62
HPS4-203ENST00000402105 IL13P35225 146 aa11.16□□□□□ -0.62
HPS4-203ENST00000402105 NUTM1Q86Y26 1132 aa11.16□□□□□ -0.62
HPS4-203ENST00000402105 ZCCHC11Q5TAX3 1644 aaKnown RBP11.16□□□□□ -0.62
HPS4-203ENST00000402105 NCOA3Q9Y6Q9 1424 aa11.16□□□□□ -0.62
HPS4-203ENST00000402105 ABCC4O15439 1325 aa11.16□□□□□ -0.62
HPS4-203ENST00000402105 TET3O43151 1660 aa11.16□□□□□ -0.62
HPS4-203ENST00000402105 GADD45BO75293 160 aaPredicted RBP11.16□□□□□ -0.62
HPS4-203ENST00000402105 USP25Q9UHP3 1055 aa11.16□□□□□ -0.62
HPS4-203ENST00000402105 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
HPS4-203ENST00000402105 FIBPO43427 364 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 ZNF445P59923 1031 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 C14orf37Q86TY3 774 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 RPAP2Q8IXW5 612 aaPredicted RBP11.15□□□□□ -0.62
HPS4-203ENST00000402105 TSPY26PQ9H489 355 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 PDE1AP54750 535 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 HSP90AB2PQ58FF8 381 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 LRSAM1Q6UWE0 723 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 MSH6P52701 1360 aa11.15□□□□□ -0.62
HPS4-203ENST00000402105 TTC12Q9H892 705 aaPredicted RBP11.15□□□□□ -0.63
HPS4-203ENST00000402105 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 CCDC39Q9UFE4 941 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 NOL7Q9UMY1 257 aaKnown RBP11.14□□□□□ -0.63
HPS4-203ENST00000402105 KIF1BO60333 1816 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 CHD1O14646 1710 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 SPC24Q8NBT2 197 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 ZKSCAN5Q9Y2L8 839 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 ASXL2Q76L83 1435 aa11.14□□□□□ -0.63
HPS4-203ENST00000402105 KIAA2012Q0VF49 1180 aa11.13□□□□□ -0.63
HPS4-203ENST00000402105 NUDT16Q96DE0 195 aaKnown RBP11.13□□□□□ -0.63
HPS4-203ENST00000402105 CPA1P15085 419 aa11.13□□□□□ -0.63
HPS4-203ENST00000402105 EIF2S2P20042 333 aaKnown RBP11.13□□□□□ -0.63
HPS4-203ENST00000402105 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
HPS4-203ENST00000402105 MROH2AA6NES4 1674 aa11.13□□□□□ -0.63
HPS4-203ENST00000402105 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
HPS4-203ENST00000402105 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
HPS4-203ENST00000402105 HCLS1P14317 486 aaPredicted RBP11.12□□□□□ -0.63
HPS4-203ENST00000402105 SYAP1Q96A49 352 aaPredicted RBP11.12□□□□□ -0.63
HPS4-203ENST00000402105 LRRCC1Q9C099 1032 aa11.12□□□□□ -0.63
HPS4-203ENST00000402105 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
HPS4-203ENST00000402105 YTHDC2Q9H6S0 1430 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 EFCAB6Q5THR3 1501 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 GNAI2P04899 355 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 MX1P20591 662 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 UNC5CLQ8IV45 518 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
HPS4-203ENST00000402105 PNMA6EA0A0J9YXQ4 647 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 MBD3O95983 291 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 CNPY2Q9Y2B0 182 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 VPS37CA5D8V6 355 aaPredicted RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
HPS4-203ENST00000402105 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
HPS4-203ENST00000402105 KCNJ4P48050 445 aa11.1□□□□□ -0.63
HPS4-203ENST00000402105 SPG7Q9UQ90 795 aa11.1□□□□□ -0.63
HPS4-203ENST00000402105 LRRFIP2Q9Y608 721 aaKnown RBP11.1□□□□□ -0.63
HPS4-203ENST00000402105 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
HPS4-203ENST00000402105 CWC27Q6UX04 472 aaKnown RBP11.1□□□□□ -0.63
HPS4-203ENST00000402105 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
HPS4-203ENST00000402105 PPRC1Q5VV67 1664 aaKnown RBP11.1□□□□□ -0.63
HPS4-203ENST00000402105 ADGRB1O14514 1584 aa11.1□□□□□ -0.63
HPS4-203ENST00000402105 GIMAP6Q6P9H5 292 aa11.1□□□□□ -0.63
HPS4-203ENST00000402105 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
HPS4-203ENST00000402105 CYP2E1P05181 493 aaPredicted RBP11.09□□□□□ -0.63
HPS4-203ENST00000402105 AMPHP49418 695 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
HPS4-203ENST00000402105 CBX1P83916 185 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 RTL1A6NKG5 1358 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 DRC7Q8IY82 874 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
HPS4-203ENST00000402105 ADCY5O95622 1261 aa11.08□□□□□ -0.63
HPS4-203ENST00000402105 FERMT3Q86UX7 667 aa11.08□□□□□ -0.63
HPS4-203ENST00000402105 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
HPS4-203ENST00000402105 GLI2P10070 1586 aa11.08□□□□□ -0.64
HPS4-203ENST00000402105 FAM135BQ49AJ0 1406 aa11.08□□□□□ -0.64
HPS4-203ENST00000402105 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
HPS4-203ENST00000402105 CAMK4Q16566 473 aa11.08□□□□□ -0.64
HPS4-203ENST00000402105 IGSF3O75054 1194 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 NRXN1Q9ULB1 1477 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 ANXA1P04083 346 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 CHMLP26374 656 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 SASS6Q6UVJ0 657 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms