RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
RERE-204ENST00000400908 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
RERE-204ENST00000400908 ANAPC15P60006 121 aa16.28■□□□□ 0.2
RERE-204ENST00000400908 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
RERE-204ENST00000400908 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
RERE-204ENST00000400908 SSR1P43307 286 aaKnown RBP16.28■□□□□ 0.2
RERE-204ENST00000400908 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
RERE-204ENST00000400908 MYZAPP0CAP1 466 aa16.28■□□□□ 0.2
RERE-204ENST00000400908 MCM3P25205 808 aa16.27■□□□□ 0.2
RERE-204ENST00000400908 AAMPQ13685 434 aa16.27■□□□□ 0.2
RERE-204ENST00000400908 CCDC175P0C221 793 aa16.27■□□□□ 0.19
RERE-204ENST00000400908 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.19
RERE-204ENST00000400908 UBE4AQ14139 1066 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 MTHFSP49914 203 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 KIF2AO00139 706 aaPredicted RBP16.26■□□□□ 0.19
RERE-204ENST00000400908 NEK4P51957 841 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 IFFO1Q0D2I5 559 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 DAAM2Q86T65 1068 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
RERE-204ENST00000400908 HIP1O00291 1037 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 ME1P48163 572 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 GRPEL1Q9HAV7 217 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 C6orf163Q5TEZ5 329 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 HMOX1P09601 288 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
RERE-204ENST00000400908 CEP57L1Q8IYX8 460 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 MPNDQ8N594 471 aa16.25■□□□□ 0.19
RERE-204ENST00000400908 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
RERE-204ENST00000400908 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
RERE-204ENST00000400908 BMP2KQ9NSY1 1161 aaPredicted RBP16.24■□□□□ 0.19
RERE-204ENST00000400908 EIF5P55010 431 aaKnown RBP16.24■□□□□ 0.19
RERE-204ENST00000400908 GSTTP1A0A1W2PQM5 241 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 CLGNO14967 610 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 CDCA7LQ96GN5 454 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
RERE-204ENST00000400908 CBX1P83916 185 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 TRIM21P19474 475 aaKnown RBP16.23■□□□□ 0.19
RERE-204ENST00000400908 KRT85P78386 507 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 PSME1Q06323 249 aa16.23■□□□□ 0.19
RERE-204ENST00000400908 ZNF397Q8NF99 534 aaPredicted RBP16.23■□□□□ 0.19
RERE-204ENST00000400908 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
RERE-204ENST00000400908 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
RERE-204ENST00000400908 SPECC1LQ69YQ0 1117 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 SEPT6Q14141 434 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
RERE-204ENST00000400908 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
RERE-204ENST00000400908 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
RERE-204ENST00000400908 PUS7Q96PZ0 661 aaKnown RBP16.21■□□□□ 0.19
RERE-204ENST00000400908 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
RERE-204ENST00000400908 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.19
RERE-204ENST00000400908 ESPNB1AK53 854 aa16.21■□□□□ 0.19
RERE-204ENST00000400908 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
RERE-204ENST00000400908 HOOK3Q86VS8 718 aa16.21■□□□□ 0.19
RERE-204ENST00000400908 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
RERE-204ENST00000400908 TNNT1P13805 278 aa16.21■□□□□ 0.18
RERE-204ENST00000400908 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.18
RERE-204ENST00000400908 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 ZSCAN12O43309 604 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 SPA17Q15506 151 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 GOPCQ9HD26 462 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 ADGRL1O94910 1474 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
RERE-204ENST00000400908 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
RERE-204ENST00000400908 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
RERE-204ENST00000400908 FERP16591 822 aa16.19■□□□□ 0.18
RERE-204ENST00000400908 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
RERE-204ENST00000400908 PPM1FP49593 454 aaPredicted RBP16.19■□□□□ 0.18
RERE-204ENST00000400908 TCP11L2Q8N4U5 519 aa16.19■□□□□ 0.18
RERE-204ENST00000400908 GNAI1P63096 354 aa16.19■□□□□ 0.18
RERE-204ENST00000400908 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
RERE-204ENST00000400908 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■□□ 18.4
RERE-204ENST00000400908 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
RERE-204ENST00000400908 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 CASQ1P31415 396 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 PTPN14Q15678 1187 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 DNAI2Q9GZS0 605 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 C11orf95C9JLR9 678 aaPredicted RBP16.18■□□□□ 0.18
RERE-204ENST00000400908 KIF5CO60282 957 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
RERE-204ENST00000400908 MNAT1P51948 309 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 FBF1Q8TES7 1133 aa16.18■□□□□ 0.18
RERE-204ENST00000400908 GTF2F1P35269 517 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■■■ 26.9
RERE-204ENST00000400908 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 CDK19Q9BWU1 502 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms