RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 ST20-MTHFSA0A0A6YYL1 179 aa9.77□□□□□ -0.84
CHD8-201ENST00000399982 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.84
CHD8-201ENST00000399982 MYZAPP0CAP1 466 aa9.77□□□□□ -0.84
CHD8-201ENST00000399982 GGT6Q6P531 493 aa9.77□□□□□ -0.84
CHD8-201ENST00000399982 STK38Q15208 465 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 NEUROD6Q96NK8 337 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 TDO2P48775 406 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 SART3Q15020 963 aaKnown RBP9.77□□□□□ -0.85
CHD8-201ENST00000399982 DZIP1Q86YF9 867 aaKnown RBP9.77□□□□□ -0.85
CHD8-201ENST00000399982 EVC2Q86UK5 1308 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 POLA1P09884 1462 aaPredicted RBP9.77□□□□□ -0.85
CHD8-201ENST00000399982 A0A1B0GUA9 196 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 CA8P35219 290 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 DDX12PQ92771 950 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 NAA15Q9BXJ9 866 aaKnown RBP9.77□□□□□ -0.85
CHD8-201ENST00000399982 ANO10Q9NW15 660 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 CUX2O14529 1486 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 APAF1O14727 1248 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
CHD8-201ENST00000399982 KLHL40Q2TBA0 621 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 WDR66Q8TBY9 1149 aa9.77□□□□□ -0.85
CHD8-201ENST00000399982 CCDC160A6NGH7 325 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
CHD8-201ENST00000399982 LNPKQ9C0E8 428 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 RASSF4Q9H2L5 321 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 HSPA4P34932 840 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 OGFRQ9NZT2 677 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 KRT32Q14532 448 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 IPO4Q8TEX9 1081 aaKnown RBP9.76□□□□□ -0.85
CHD8-201ENST00000399982 DNAI2Q9GZS0 605 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 TNNT1P13805 278 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 SSX2IPQ9Y2D8 614 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 CYP46A1Q9Y6A2 500 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 CCDC150Q8NCX0 1101 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 CASQ1P31415 396 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 SWAP70Q9UH65 585 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 TEFQ10587 303 aa9.76□□□□□ -0.85
CHD8-201ENST00000399982 FIBPO43427 364 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 TTC36A6NLP5 189 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 CDKL5O76039 1030 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 TTC31Q49AM3 519 aaPredicted RBP9.75□□□□□ -0.85
CHD8-201ENST00000399982 FLIIQ13045 1269 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 CCDC50Q8IVM0 306 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 TAF4BQ92750 862 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 RRP7AQ9Y3A4 280 aaKnown RBP9.75□□□□□ -0.85
CHD8-201ENST00000399982 SLC3A2P08195 630 aaKnown RBP9.75□□□□□ -0.85
CHD8-201ENST00000399982 ARL1P40616 181 aaPredicted RBP9.75□□□□□ -0.85
CHD8-201ENST00000399982 C6orf163Q5TEZ5 329 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 BCL2L13Q9BXK5 485 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 ZNF397Q8NF99 534 aaPredicted RBP9.75□□□□□ -0.85
CHD8-201ENST00000399982 POTEJP0CG39 1038 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 GTF2F1P35269 517 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD8-201ENST00000399982 RAB3IL1Q8TBN0 382 aa9.75□□□□□ -0.85
CHD8-201ENST00000399982 NAP1L3Q99457 506 aaPredicted RBP9.75□□□□□ -0.85
CHD8-201ENST00000399982 A0A1B0GUL7 405 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 LIG1P18858 919 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 RBM5P52756 815 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHD8-201ENST00000399982 CTNNBL1Q8WYA6 563 aaPredicted RBP9.74□□□□□ -0.85
CHD8-201ENST00000399982 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
CHD8-201ENST00000399982 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■□□□□ 9.7
CHD8-201ENST00000399982 SEPT6Q14141 434 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 RNF187Q5TA31 235 aaPredicted RBP9.74□□□□□ -0.85
CHD8-201ENST00000399982 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 ZHX1Q9UKY1 873 aaPredicted RBP9.74□□□□□ -0.85
CHD8-201ENST00000399982 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 SEPT10Q9P0V9 454 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 EID1Q9Y6B2 187 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 GSTTP1A0A1W2PQM5 241 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 SPATA32Q96LK8 384 aa9.74□□□□□ -0.85
CHD8-201ENST00000399982 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
CHD8-201ENST00000399982 ARFGAP3Q9NP61 516 aa9.73□□□□□ -0.85
CHD8-201ENST00000399982 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
CHD8-201ENST00000399982 WDR63Q8IWG1 891 aa9.73□□□□□ -0.85
CHD8-201ENST00000399982 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
CHD8-201ENST00000399982 RGS22Q8NE09 1264 aa9.73□□□□□ -0.85
CHD8-201ENST00000399982 SH2B1Q9NRF2 756 aaPredicted RBP9.73□□□□□ -0.85
CHD8-201ENST00000399982 FAM184BQ9ULE4 1060 aa9.73□□□□□ -0.85
CHD8-201ENST00000399982 RSRC1Q96IZ7 334 aaKnown RBP9.73□□□□□ -0.85
CHD8-201ENST00000399982 SSBP05455 408 aaKnown RBP eCLIP9.73□□□□□ -0.856e-9■■■■□ 22.6
CHD8-201ENST00000399982 NSRP1Q9H0G5 558 aaKnown RBP9.73□□□□□ -0.85
CHD8-201ENST00000399982 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
CHD8-201ENST00000399982 ZKSCAN5Q9Y2L8 839 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 PAFAH1B1P43034 410 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 HOOK3Q86VS8 718 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 CETN2P41208 172 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 TAOK3Q9H2K8 898 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 SH3BP5O60239 455 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 ZNF76P36508 570 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 SARNPP82979 210 aaKnown RBP9.72□□□□□ -0.85
CHD8-201ENST00000399982 CKAP4Q07065 602 aaKnown RBP9.72□□□□□ -0.85
CHD8-201ENST00000399982 ATAD2Q6PL18 1390 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 IFFO1Q0D2I5 559 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
CHD8-201ENST00000399982 OPA1O60313 960 aa9.71□□□□□ -0.85
CHD8-201ENST00000399982 WASF1Q92558 559 aa9.71□□□□□ -0.85
CHD8-201ENST00000399982 SYCE3A1L190 88 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 LMAN1P49257 510 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms