RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 RGS12O14924 1447 aa11.59□□□□□ -0.55
BRCC3-205ENST00000399026 USP31Q70CQ4 1352 aa11.58□□□□□ -0.56
BRCC3-205ENST00000399026 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
BRCC3-205ENST00000399026 FNBP4Q8N3X1 1017 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-205ENST00000399026 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
BRCC3-205ENST00000399026 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-205ENST00000399026 CAMTA1Q9Y6Y1 1673 aa11.58□□□□□ -0.56
BRCC3-205ENST00000399026 CPDO75976 1380 aa11.57□□□□□ -0.56
BRCC3-205ENST00000399026 GCP02774 474 aa11.57□□□□□ -0.56
BRCC3-205ENST00000399026 BTG4Q9NY30 223 aa11.57□□□□□ -0.56
BRCC3-205ENST00000399026 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
BRCC3-205ENST00000399026 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
BRCC3-205ENST00000399026 UNC5CLQ8IV45 518 aa11.56□□□□□ -0.56
BRCC3-205ENST00000399026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
BRCC3-205ENST00000399026 COL5A2P05997 1499 aaPredicted RBP11.56□□□□□ -0.56
BRCC3-205ENST00000399026 ABCC6O95255 1503 aa11.55□□□□□ -0.56
BRCC3-205ENST00000399026 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
BRCC3-205ENST00000399026 CARD14Q9BXL6 1004 aa11.55□□□□□ -0.56
BRCC3-205ENST00000399026 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
BRCC3-205ENST00000399026 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
BRCC3-205ENST00000399026 TRPC5Q9UL62 973 aaPredicted RBP11.55□□□□□ -0.56
BRCC3-205ENST00000399026 WASHC2AQ641Q2 1341 aa11.55□□□□□ -0.56
BRCC3-205ENST00000399026 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
BRCC3-205ENST00000399026 BRWD3Q6RI45 1802 aa11.54□□□□□ -0.56
BRCC3-205ENST00000399026 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
BRCC3-205ENST00000399026 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
BRCC3-205ENST00000399026 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
BRCC3-205ENST00000399026 RXRBP28702 533 aa11.53□□□□□ -0.56
BRCC3-205ENST00000399026 KCNH5Q8NCM2 988 aa11.53□□□□□ -0.56
BRCC3-205ENST00000399026 COG3Q96JB2 828 aa11.53□□□□□ -0.56
BRCC3-205ENST00000399026 PANK3Q9H999 370 aa11.53□□□□□ -0.56
BRCC3-205ENST00000399026 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
BRCC3-205ENST00000399026 FYB1O15117 783 aa11.52□□□□□ -0.57
BRCC3-205ENST00000399026 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
BRCC3-205ENST00000399026 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
BRCC3-205ENST00000399026 FBLN1P23142 703 aa11.51□□□□□ -0.57
BRCC3-205ENST00000399026 VPS72Q15906 364 aa11.51□□□□□ -0.57
BRCC3-205ENST00000399026 ARHGEF25Q86VW2 580 aa11.51□□□□□ -0.57
BRCC3-205ENST00000399026 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
BRCC3-205ENST00000399026 FAM208AQ9UK61 1670 aaKnown RBP11.51□□□□□ -0.57
BRCC3-205ENST00000399026 CGNL1Q0VF96 1302 aa11.51□□□□□ -0.57
BRCC3-205ENST00000399026 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
BRCC3-205ENST00000399026 LRRC37A3O60309 1634 aa11.5□□□□□ -0.57
BRCC3-205ENST00000399026 LARP1Q6PKG0 1096 aaKnown RBP11.5□□□□□ -0.57
BRCC3-205ENST00000399026 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
BRCC3-205ENST00000399026 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
BRCC3-205ENST00000399026 RRS1Q15050 365 aaKnown RBP11.49□□□□□ -0.57
BRCC3-205ENST00000399026 USP35Q9P2H5 1018 aa11.49□□□□□ -0.57
BRCC3-205ENST00000399026 SPATA31A5Q5VU36 1347 aa11.49□□□□□ -0.57
BRCC3-205ENST00000399026 SPATA31A7Q8IWB4 1347 aa11.49□□□□□ -0.57
BRCC3-205ENST00000399026 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
BRCC3-205ENST00000399026 A0A0G2JS52 829 aa11.48□□□□□ -0.57
BRCC3-205ENST00000399026 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
BRCC3-205ENST00000399026 MYT1Q01538 1121 aa11.48□□□□□ -0.57
BRCC3-205ENST00000399026 FAM98CQ17RN3 349 aaKnown RBP11.48□□□□□ -0.57
BRCC3-205ENST00000399026 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
BRCC3-205ENST00000399026 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
BRCC3-205ENST00000399026 RTL1A6NKG5 1358 aa11.48□□□□□ -0.57
BRCC3-205ENST00000399026 CRB1P82279 1406 aa11.48□□□□□ -0.57
BRCC3-205ENST00000399026 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
BRCC3-205ENST00000399026 BLMP54132 1417 aaPredicted RBP11.47□□□□□ -0.57
BRCC3-205ENST00000399026 NSD2O96028 1365 aa11.47□□□□□ -0.57
BRCC3-205ENST00000399026 SPATA31A1Q5TZJ5 1347 aa11.47□□□□□ -0.57
BRCC3-205ENST00000399026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.47□□□□□ -0.57
BRCC3-205ENST00000399026 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
BRCC3-205ENST00000399026 EVA1CP58658 441 aa11.47□□□□□ -0.57
BRCC3-205ENST00000399026 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
BRCC3-205ENST00000399026 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
BRCC3-205ENST00000399026 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
BRCC3-205ENST00000399026 ERBB3P21860 1342 aa11.46□□□□□ -0.57
BRCC3-205ENST00000399026 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.57
BRCC3-205ENST00000399026 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
BRCC3-205ENST00000399026 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
BRCC3-205ENST00000399026 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.57
BRCC3-205ENST00000399026 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
BRCC3-205ENST00000399026 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-205ENST00000399026 HOXC9P31274 260 aa11.45□□□□□ -0.58
BRCC3-205ENST00000399026 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
BRCC3-205ENST00000399026 LTV1Q96GA3 475 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-205ENST00000399026 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
BRCC3-205ENST00000399026 FLT4P35916 1363 aa11.44□□□□□ -0.58
BRCC3-205ENST00000399026 AMPHP49418 695 aa11.44□□□□□ -0.58
BRCC3-205ENST00000399026 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-205ENST00000399026 SEPT12Q8IYM1 358 aa11.44□□□□□ -0.58
BRCC3-205ENST00000399026 ANKRD24Q8TF21 1146 aa11.44□□□□□ -0.58
BRCC3-205ENST00000399026 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
BRCC3-205ENST00000399026 EP400Q96L91 3159 aa11.43□□□□□ -0.58
BRCC3-205ENST00000399026 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
BRCC3-205ENST00000399026 TCP11L2Q8N4U5 519 aa11.43□□□□□ -0.58
BRCC3-205ENST00000399026 IP6K1Q92551 441 aa11.43□□□□□ -0.58
BRCC3-205ENST00000399026 DISP2A7MBM2 1401 aa11.43□□□□□ -0.58
BRCC3-205ENST00000399026 SOCS7O14512 581 aa11.42□□□□□ -0.58
BRCC3-205ENST00000399026 PPM1GO15355 546 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-205ENST00000399026 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
BRCC3-205ENST00000399026 NLRP2Q9NX02 1062 aa11.42□□□□□ -0.58
BRCC3-205ENST00000399026 SHANK3Q9BYB0 1731 aa11.42□□□□□ -0.58
BRCC3-205ENST00000399026 PER1O15534 1290 aaPredicted RBP11.41□□□□□ -0.58
BRCC3-205ENST00000399026 HSP90AB2PQ58FF8 381 aa11.4□□□□□ -0.58
BRCC3-205ENST00000399026 FAM182BQ5T319 152 aa11.4□□□□□ -0.58
BRCC3-205ENST00000399026 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms