RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 CCDC196A0A1B0GTZ2 297 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 TSNARE1Q96NA8 513 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 TTC12Q9H892 705 aaPredicted RBP5.88□□□□□ -1.47
TTC3-204ENST00000399017 SYNJ2O15056 1496 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 CEP135Q66GS9 1140 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 WASF1Q92558 559 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 BICD2Q8TD16 824 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 ANO2Q9NQ90 1003 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 DDX19BQ9UMR2 479 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 CCDC152Q4G0S7 254 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 GPHNQ9NQX3 736 aaPredicted RBP5.88□□□□□ -1.47
TTC3-204ENST00000399017 TMOD3Q9NYL9 352 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 CEP131Q9UPN4 1083 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 NOD1Q9Y239 953 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 UBTFL1P0CB47 393 aaPredicted RBP5.88□□□□□ -1.47
TTC3-204ENST00000399017 AIMP1Q12904 312 aaKnown RBP5.88□□□□□ -1.47
TTC3-204ENST00000399017 DZIP1Q86YF9 867 aaKnown RBP5.88□□□□□ -1.47
TTC3-204ENST00000399017 ZHX3Q9H4I2 956 aa5.88□□□□□ -1.47
TTC3-204ENST00000399017 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 AAMPQ13685 434 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 KRT23Q9C075 422 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 RBM28Q9NW13 759 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 OTUD7BQ6GQQ9 843 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 CFAP57Q96MR6 1250 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 INTS3Q68E01 1043 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 RAB3IL1Q8TBN0 382 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 ODF2LQ9ULJ1 636 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 SUPT6HQ7KZ85 1726 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 USP5P45974 858 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 NUCB2P80303 420 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 ANKRD45Q5TZF3 282 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 CCDC12Q8WUD4 166 aaPredicted RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 HACE1Q8IYU2 909 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 SLC52A1Q9NWF4 448 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 MTMR7Q9Y216 660 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 CASTP20810 708 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 TCIRG1Q13488 830 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 UBAP1LF5GYI3 381 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 EXOC5O00471 708 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 EIF3JO75822 258 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 BAG4O95429 457 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 SNX16P57768 344 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 CTNNA3Q9UI47 895 aa5.87□□□□□ -1.47
TTC3-204ENST00000399017 PALM3A6NDB9 673 aaPredicted RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 CACYBPQ9HB71 228 aaKnown RBP5.87□□□□□ -1.47
TTC3-204ENST00000399017 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 UBAC1Q9BSL1 405 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.86□□□□□ -1.47
TTC3-204ENST00000399017 V9GYY5 206 aaPredicted RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 MCM2P49736 904 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 SRCIN1Q9C0H9 1055 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 FILIP1Q7Z7B0 1213 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 ZNF444Q8N0Y2 327 aaPredicted RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 GNAI3P08754 354 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 ZNF569Q5MCW4 686 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 ALS2CR12Q96Q35 445 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 ORC3Q9UBD5 711 aaPredicted RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 IQCA1Q86XH1 822 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 TAOK3Q9H2K8 898 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 SMC3Q9UQE7 1217 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 NR1I2O75469 434 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 PLVAPQ9BX97 442 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 OPA1O60313 960 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 KINO60870 393 aaKnown RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 CDC37L1Q7L3B6 337 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 SDF4Q9BRK5 362 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 TMEM266Q2M3C6 531 aa5.86□□□□□ -1.47
TTC3-204ENST00000399017 ZNF396Q96N95 335 aaPredicted RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 CDC5LQ99459 802 aaKnown RBP5.86□□□□□ -1.47
TTC3-204ENST00000399017 KIF21BO75037 1637 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 LDHCP07864 332 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 TDO2P48775 406 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 EXOC4Q96A65 974 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 RSPH6AQ9H0K4 717 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 FAM177BA6PVY3 158 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 LETM1O95202 739 aaPredicted RBP5.85□□□□□ -1.47
TTC3-204ENST00000399017 ACTN2P35609 894 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 SLC8A3P57103 927 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 SPATA24Q86W54 205 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 CCDC88BA6NC98 1476 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 GOLGA6L10A0A0M3HER8 536 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 TANGO6Q9C0B7 1094 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 NYXQ9GZU5 481 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 RCAN3Q9UKA8 241 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 CTNNA2P26232 953 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 ZKSCAN2Q63HK3 967 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 CCDC175P0C221 793 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 TTC16Q8NEE8 873 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 POLR3DP05423 398 aaPredicted RBP5.85□□□□□ -1.47
TTC3-204ENST00000399017 CCDC172P0C7W6 258 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 MAP3K11Q16584 847 aa5.85□□□□□ -1.47
TTC3-204ENST00000399017 ERLIN1O75477 346 aa5.84□□□□□ -1.47
TTC3-204ENST00000399017 IFIT1P09914 478 aaKnown RBP5.84□□□□□ -1.47
TTC3-204ENST00000399017 EIF6P56537 245 aaKnown RBP5.84□□□□□ -1.47
TTC3-204ENST00000399017 GSTO1P78417 241 aa5.84□□□□□ -1.47
TTC3-204ENST00000399017 PPP1R42Q7Z4L9 355 aa5.84□□□□□ -1.47
TTC3-204ENST00000399017 ZNF622Q969S3 477 aaKnown RBP eCLIP5.84□□□□□ -1.478e-7■■□□□ 12.6
TTC3-204ENST00000399017 PPP1R9BQ96SB3 815 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms