RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 GABPB2Q8TAK5 448 aaPredicted RBP3.24□□□□□ -1.89
CHD9-202ENST00000398510 PIBF1Q8WXW3 757 aa3.24□□□□□ -1.89
CHD9-202ENST00000398510 PPM1EQ8WY54 764 aa3.24□□□□□ -1.89
CHD9-202ENST00000398510 CUL5Q93034 780 aa3.24□□□□□ -1.89
CHD9-202ENST00000398510 ORC3Q9UBD5 711 aaPredicted RBP3.24□□□□□ -1.89
CHD9-202ENST00000398510 COG6Q9Y2V7 657 aa3.24□□□□□ -1.89
CHD9-202ENST00000398510 FMN2Q9NZ56 1722 aa3.24□□□□□ -1.89
CHD9-202ENST00000398510 GOLGA6L10A6NI86 522 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 MPHOSPH10O00566 681 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 IFIT2P09913 472 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 ELMSAN1Q6PJG2 1045 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 FRAT1Q92837 279 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 TNPO1Q92973 898 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 API5Q9BZZ5 524 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 ARGLU1Q9NWB6 273 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 KIF1AQ12756 1690 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 CDK12Q9NYV4 1490 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 PPRC1Q5VV67 1664 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 FAM13BQ9NYF5 915 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 BLMP54132 1417 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 ZPR1O75312 459 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 CDCA7Q9BWT1 371 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 SOS1Q07889 1333 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 GBP2P32456 591 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 CCDC57Q2TAC2 916 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 PLEKHO1Q53GL0 409 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 BCL11BQ9C0K0 894 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 RBM25P49756 843 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 GSTO1P78417 241 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 HSP90B2PQ58FF3 399 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 PIK3C2GO75747 1445 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 TRAPPC8Q9Y2L5 1435 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 ARHGEF10O15013 1369 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 NDC80O14777 642 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 CCDC172P0C7W6 258 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 MCM3P25205 808 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 STXBP4Q6ZWJ1 553 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 BEGAINQ9BUH8 593 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 SH2D4AQ9H788 454 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 SEC63Q9UGP8 760 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 FBXO3Q9UK99 471 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 MROH2AA6NES4 1674 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 ABCC11Q96J66 1382 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 NEBLO76041 1014 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 FGFR1OPO95684 399 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 GRIPAP1Q4V328 841 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 SYTL4Q96C24 671 aaPredicted RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 TOMM22Q9NS69 142 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 G3BP1Q13283 466 aaKnown RBP eCLIP3.23□□□□□ -1.89
CHD9-202ENST00000398510 WDR78Q5VTH9 848 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 INTS3Q68E01 1043 aaKnown RBP3.23□□□□□ -1.89
CHD9-202ENST00000398510 CNTROBQ8N137 903 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 PAF1Q8N7H5 531 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 FERMT2Q96AC1 680 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 PLVAPQ9BX97 442 aa3.23□□□□□ -1.89
CHD9-202ENST00000398510 TTF1Q15361 905 aaPredicted RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 CENPQQ7L2Z9 268 aaPredicted RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 CEP131Q9UPN4 1083 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 VIRMAQ69YN4 1812 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 BECN2A8MW95 431 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 STAMBPO95630 424 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 TMEM132AQ24JP5 1023 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 WASHC4Q2M389 1173 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 TRPM1Q7Z4N2 1603 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 UHRF1BP1LA0JNW5 1464 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 SOGA3Q5TF21 947 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 CADPS2Q86UW7 1296 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 CCDC94Q9BW85 323 aaPredicted RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 EDEM3Q9BZQ6 932 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 CWC15Q9P013 229 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 PPP1R1BQ9UD71 204 aaPredicted RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 ST5P78524 1137 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 STK24Q9Y6E0 443 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 RIMS1Q86UR5 1692 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 MYH10P35580 1976 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 ANKRD62A6NC57 917 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 DIAPH1O60610 1272 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 DDX10Q13206 875 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 MAP3K11Q16584 847 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 SBNO1A3KN83 1393 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 KIAA1107Q9UPP5 1409 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 PES1O00541 588 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 SPTY2D1Q68D10 685 aaPredicted RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 TARBP1Q13395 1621 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 ANKRD18BA2A2Z9 1011 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 SPDYE4A6NLX3 237 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 CCDC158Q5M9N0 1113 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 HOMER2Q9NSB8 354 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 RBM28Q9NW13 759 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 CETN1Q12798 172 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 CNPY4Q8N129 248 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 MAP7D2Q96T17 732 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 OFD1O75665 1012 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 PLCG2P16885 1265 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 TATP17735 454 aaPredicted RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 NCBP1Q09161 790 aaKnown RBP3.22□□□□□ -1.89
CHD9-202ENST00000398510 KRT32Q14532 448 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 ZBED9Q6R2W3 1325 aa3.22□□□□□ -1.89
CHD9-202ENST00000398510 CCDC191Q8NCU4 936 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms