RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 PBX2P40425 430 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 HRO43593 1189 aa9.28□□□□□ -0.92
CEP290-202ENST00000397838 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
CEP290-202ENST00000397838 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
CEP290-202ENST00000397838 FAM205CA6NFA0 338 aa9.27□□□□□ -0.92
CEP290-202ENST00000397838 LDLRAD1Q5T700 205 aa9.27□□□□□ -0.92
CEP290-202ENST00000397838 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.27□□□□□ -0.92
CEP290-202ENST00000397838 FAM161BQ96MY7 647 aa9.27□□□□□ -0.92
CEP290-202ENST00000397838 BACH2Q9BYV9 841 aa9.27□□□□□ -0.92
CEP290-202ENST00000397838 VAMP1P23763 118 aa9.27□□□□□ -0.93
CEP290-202ENST00000397838 SCTRP47872 440 aa9.27□□□□□ -0.93
CEP290-202ENST00000397838 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
CEP290-202ENST00000397838 P4HBP07237 508 aaKnown RBP9.26□□□□□ -0.93
CEP290-202ENST00000397838 BAP1Q92560 729 aa9.26□□□□□ -0.93
CEP290-202ENST00000397838 PCDHB11Q9Y5F2 797 aa9.26□□□□□ -0.93
CEP290-202ENST00000397838 RAB15P59190 212 aa9.26□□□□□ -0.93
CEP290-202ENST00000397838 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
CEP290-202ENST00000397838 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
CEP290-202ENST00000397838 TSR3Q9UJK0 312 aaKnown RBP9.25□□□□□ -0.93
CEP290-202ENST00000397838 EMP3P54852 163 aa9.24□□□□□ -0.93
CEP290-202ENST00000397838 TMC7Q7Z402 723 aa9.24□□□□□ -0.93
CEP290-202ENST00000397838 ANKK1Q8NFD2 765 aa9.24□□□□□ -0.93
CEP290-202ENST00000397838 PPP1R1BQ9UD71 204 aaPredicted RBP9.24□□□□□ -0.93
CEP290-202ENST00000397838 TK2O00142 265 aa9.24□□□□□ -0.93
CEP290-202ENST00000397838 ZNF592Q92610 1267 aa9.24□□□□□ -0.93
CEP290-202ENST00000397838 PUS7Q96PZ0 661 aaKnown RBP9.24□□□□□ -0.93
CEP290-202ENST00000397838 ST18O60284 1047 aa9.23□□□□□ -0.93
CEP290-202ENST00000397838 NAALADL2Q58DX5 795 aa9.23□□□□□ -0.93
CEP290-202ENST00000397838 SREK1Q8WXA9 508 aaKnown RBP9.23□□□□□ -0.93
CEP290-202ENST00000397838 C8orf37Q96NL8 207 aa9.23□□□□□ -0.93
CEP290-202ENST00000397838 SAP130Q9H0E3 1048 aa9.23□□□□□ -0.93
CEP290-202ENST00000397838 AGERQ15109 404 aa9.23□□□□□ -0.93
CEP290-202ENST00000397838 RGL4Q8IZJ4 473 aa9.23□□□□□ -0.93
CEP290-202ENST00000397838 RBM19Q9Y4C8 960 aaKnown RBP9.23□□□□□ -0.93
CEP290-202ENST00000397838 MRPL58Q14197 206 aaKnown RBP9.22□□□□□ -0.93
CEP290-202ENST00000397838 DRC1Q96MC2 740 aa9.22□□□□□ -0.93
CEP290-202ENST00000397838 MPSTP25325 297 aa9.22□□□□□ -0.93
CEP290-202ENST00000397838 ZC3H6P61129 1189 aaKnown RBP9.22□□□□□ -0.93
CEP290-202ENST00000397838 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CEP290-202ENST00000397838 LSM11P83369 360 aaKnown RBP eCLIP9.21□□□□□ -0.93
CEP290-202ENST00000397838 HDLBPQ00341 1268 aaKnown RBP9.21□□□□□ -0.93
CEP290-202ENST00000397838 SETDB2Q96T68 719 aa9.21□□□□□ -0.93
CEP290-202ENST00000397838 ZNF358Q9NW07 568 aa9.21□□□□□ -0.93
CEP290-202ENST00000397838 TMEM229AB2RXF0 380 aa9.21□□□□□ -0.94
CEP290-202ENST00000397838 HELQQ8TDG4 1101 aa9.21□□□□□ -0.94
CEP290-202ENST00000397838 SLC10A4Q96EP9 437 aa9.21□□□□□ -0.94
CEP290-202ENST00000397838 ESPNB1AK53 854 aa9.2□□□□□ -0.94
CEP290-202ENST00000397838 ZNF511Q8NB15 262 aa9.2□□□□□ -0.94
CEP290-202ENST00000397838 SMARCA5O60264 1052 aaPredicted RBP9.2□□□□□ -0.94
CEP290-202ENST00000397838 HSP90B1P14625 803 aaKnown RBP9.2□□□□□ -0.94
CEP290-202ENST00000397838 USP4Q13107 963 aa9.2□□□□□ -0.94
CEP290-202ENST00000397838 SF3B2Q13435 895 aaKnown RBP9.2□□□□□ -0.94
CEP290-202ENST00000397838 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
CEP290-202ENST00000397838 WNT2BQ93097 391 aa9.2□□□□□ -0.94
CEP290-202ENST00000397838 TNS4Q8IZW8 715 aa9.19□□□□□ -0.94
CEP290-202ENST00000397838 CCDC87Q9NVE4 849 aa9.19□□□□□ -0.94
CEP290-202ENST00000397838 ERCC5P28715 1186 aaPredicted RBP9.18□□□□□ -0.94
CEP290-202ENST00000397838 NBPF20Q3BBV1 942 aa9.18□□□□□ -0.94
CEP290-202ENST00000397838 BPHLQ86WA6 291 aaPredicted RBP9.18□□□□□ -0.94
CEP290-202ENST00000397838 CCDC125Q86Z20 511 aa9.18□□□□□ -0.94
CEP290-202ENST00000397838 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
CEP290-202ENST00000397838 SCNN1DP51172 638 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 RAD51AP2Q09MP3 1159 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 FAM26DQ5JW98 314 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
CEP290-202ENST00000397838 ADH1BP00325 375 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 IGHA2P01877 340 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 ZNF516Q92618 1163 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 TSPAN10Q9H1Z9 355 aaPredicted RBP9.17□□□□□ -0.94
CEP290-202ENST00000397838 WWC3Q9ULE0 1092 aa9.17□□□□□ -0.94
CEP290-202ENST00000397838 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
CEP290-202ENST00000397838 TBCELQ5QJ74 424 aa9.16□□□□□ -0.94
CEP290-202ENST00000397838 ZPR1O75312 459 aa9.16□□□□□ -0.94
CEP290-202ENST00000397838 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
CEP290-202ENST00000397838 C1QTNF2Q9BXJ5 285 aa9.16□□□□□ -0.94
CEP290-202ENST00000397838 TREHO43280 583 aa9.15□□□□□ -0.94
CEP290-202ENST00000397838 PTCD1O75127 700 aaKnown RBP9.15□□□□□ -0.94
CEP290-202ENST00000397838 NPR3P17342 541 aa9.15□□□□□ -0.94
CEP290-202ENST00000397838 FMR1Q06787 632 aaKnown RBP eCLIP9.15□□□□□ -0.94
CEP290-202ENST00000397838 RNF20Q5VTR2 975 aa9.15□□□□□ -0.94
CEP290-202ENST00000397838 RBCK1Q9BYM8 510 aa9.15□□□□□ -0.94
CEP290-202ENST00000397838 A0A1W2PRU2 124 aa9.14□□□□□ -0.95
CEP290-202ENST00000397838 GPR182O15218 404 aa9.14□□□□□ -0.95
CEP290-202ENST00000397838 EPHA4P54764 986 aa9.14□□□□□ -0.95
CEP290-202ENST00000397838 SH3BP2P78314 561 aa9.14□□□□□ -0.95
CEP290-202ENST00000397838 FCF1Q9Y324 198 aaKnown RBP9.14□□□□□ -0.95
CEP290-202ENST00000397838 MAPK8P45983 427 aa9.14□□□□□ -0.95
CEP290-202ENST00000397838 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
CEP290-202ENST00000397838 M0R2N6 131 aa9.13□□□□□ -0.95
CEP290-202ENST00000397838 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
CEP290-202ENST00000397838 FZD6O60353 706 aa9.13□□□□□ -0.95
CEP290-202ENST00000397838 ANKRD13DQ6ZTN6 518 aa9.13□□□□□ -0.95
CEP290-202ENST00000397838 MTRQ99707 1265 aa9.13□□□□□ -0.95
CEP290-202ENST00000397838 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
CEP290-202ENST00000397838 PARP2Q9UGN5 583 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms