RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RRP7AQ9Y3A4 280 aaKnown RBP30.93■■■□□ 2.54
TSPAN4-202ENST00000397396 SALL2Q9Y467 1007 aaPredicted RBP30.93■■■□□ 2.54
TSPAN4-202ENST00000397396 OVOS2A0A0G2JMS6 1433 aa30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 MEGF6O75095 1541 aa30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 VPS72Q15906 364 aa30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 PHF23Q9BUL5 403 aaPredicted RBP30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 CDCA7Q9BWT1 371 aaPredicted RBP30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 USP21Q9UK80 565 aa30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 SPG7Q9UQ90 795 aa30.92■■■□□ 2.54
TSPAN4-202ENST00000397396 MTHFSDQ2M296 383 aaKnown RBP30.91■■■□□ 2.54
TSPAN4-202ENST00000397396 SPATA31A1Q5TZJ5 1347 aa30.9■■■□□ 2.54
TSPAN4-202ENST00000397396 SPATA31A5Q5VU36 1347 aa30.9■■■□□ 2.54
TSPAN4-202ENST00000397396 SPATA31A7Q8IWB4 1347 aa30.9■■■□□ 2.54
TSPAN4-202ENST00000397396 CENPBP07199 599 aaPredicted RBP30.9■■■□□ 2.54
TSPAN4-202ENST00000397396 AFF2P51816 1311 aa30.89■■■□□ 2.54
TSPAN4-202ENST00000397396 ZNF521Q96K83 1311 aa30.89■■■□□ 2.54
TSPAN4-202ENST00000397396 HTATSF1O43719 755 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-202ENST00000397396 CALD1Q05682 793 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-202ENST00000397396 WWC1Q8IX03 1113 aa30.89■■■□□ 2.54
TSPAN4-202ENST00000397396 PKD1L3Q7Z443 1732 aa30.88■■■□□ 2.53
TSPAN4-202ENST00000397396 WDR63Q8IWG1 891 aa30.87■■■□□ 2.53
TSPAN4-202ENST00000397396 RTF1Q92541 710 aaKnown RBP30.87■■■□□ 2.53
TSPAN4-202ENST00000397396 CCDC9Q9Y3X0 531 aaKnown RBP30.87■■■□□ 2.53
TSPAN4-202ENST00000397396 MAP3K5Q99683 1374 aa30.86■■■□□ 2.53
TSPAN4-202ENST00000397396 SENP3-EIF4A1A0A087X0R7 540 aa30.86■■■□□ 2.53
TSPAN4-202ENST00000397396 C1orf141Q5JVX7 400 aa30.86■■■□□ 2.53
TSPAN4-202ENST00000397396 USP35Q9P2H5 1018 aa30.86■■■□□ 2.53
TSPAN4-202ENST00000397396 DISP2A7MBM2 1401 aa30.86■■■□□ 2.53
TSPAN4-202ENST00000397396 WNK3Q9BYP7 1800 aa30.86■■■□□ 2.53
TSPAN4-202ENST00000397396 AKAP4Q5JQC9 854 aa30.85■■■□□ 2.53
TSPAN4-202ENST00000397396 ZNF530Q6P9A1 599 aaPredicted RBP30.85■■■□□ 2.53
TSPAN4-202ENST00000397396 GNAT3A8MTJ3 354 aa30.84■■■□□ 2.53
TSPAN4-202ENST00000397396 GOLGA2Q08379 1002 aa30.84■■■□□ 2.53
TSPAN4-202ENST00000397396 BARGINQ6ZT62 677 aa30.84■■■□□ 2.53
TSPAN4-202ENST00000397396 TRIM35Q9UPQ4 493 aa30.84■■■□□ 2.53
TSPAN4-202ENST00000397396 DLG5Q8TDM6 1919 aa30.83■■■□□ 2.53
TSPAN4-202ENST00000397396 TRPC5Q9UL62 973 aaPredicted RBP30.82■■■□□ 2.52
TSPAN4-202ENST00000397396 IL16Q14005 1332 aa30.82■■■□□ 2.52
TSPAN4-202ENST00000397396 PCDH11XQ9BZA7 1347 aa30.82■■■□□ 2.52
TSPAN4-202ENST00000397396 PCDH11YQ9BZA8 1340 aa30.82■■■□□ 2.52
TSPAN4-202ENST00000397396 ZCRB1Q8TBF4 217 aaKnown RBP30.81■■■□□ 2.52
TSPAN4-202ENST00000397396 ATRNO75882 1429 aa30.8■■■□□ 2.52
TSPAN4-202ENST00000397396 HSP90AB1P08238 724 aaKnown RBP30.79■■■□□ 2.52
TSPAN4-202ENST00000397396 IFNL2Q8IZJ0 200 aa30.79■■■□□ 2.52
TSPAN4-202ENST00000397396 E9PSI1 815 aa30.78■■■□□ 2.52
TSPAN4-202ENST00000397396 ZNF772Q68DY9 489 aaPredicted RBP30.77■■■□□ 2.52
TSPAN4-202ENST00000397396 TNS2Q63HR2 1409 aa30.76■■■□□ 2.52
TSPAN4-202ENST00000397396 PHKG2P15735 406 aa30.74■■■□□ 2.51
TSPAN4-202ENST00000397396 EXOC5O00471 708 aa30.73■■■□□ 2.51
TSPAN4-202ENST00000397396 MYH16Q9H6N6 1097 aa30.73■■■□□ 2.51
TSPAN4-202ENST00000397396 GJD4Q96KN9 370 aaPredicted RBP30.73■■■□□ 2.51
TSPAN4-202ENST00000397396 LRRC37A3O60309 1634 aa30.72■■■□□ 2.51
TSPAN4-202ENST00000397396 SLFN5Q08AF3 891 aa30.71■■■□□ 2.51
TSPAN4-202ENST00000397396 IFT57Q9NWB7 429 aa30.71■■■□□ 2.51
TSPAN4-202ENST00000397396 CEMIPQ8WUJ3 1361 aa30.7■■■□□ 2.51
TSPAN4-202ENST00000397396 ADAMTS7Q9UKP4 1686 aa30.7■■■□□ 2.5
TSPAN4-202ENST00000397396 GNAI1P63096 354 aa30.7■■■□□ 2.5
TSPAN4-202ENST00000397396 DDB1Q16531 1140 aa30.7■■■□□ 2.5
TSPAN4-202ENST00000397396 MCM10Q7L590 875 aa30.7■■■□□ 2.5
TSPAN4-202ENST00000397396 DCAF5Q96JK2 942 aa30.7■■■□□ 2.5
TSPAN4-202ENST00000397396 SHANK3Q9BYB0 1731 aa30.69■■■□□ 2.5
TSPAN4-202ENST00000397396 CYP27B1O15528 508 aa30.69■■■□□ 2.5
TSPAN4-202ENST00000397396 QTRT2Q9H974 415 aaKnown RBP30.69■■■□□ 2.5
TSPAN4-202ENST00000397396 GLI3P10071 1580 aa30.68■■■□□ 2.5
TSPAN4-202ENST00000397396 DCTN1Q14203 1278 aa30.68■■■□□ 2.5
TSPAN4-202ENST00000397396 FAM98CQ17RN3 349 aaKnown RBP30.68■■■□□ 2.5
TSPAN4-202ENST00000397396 RNMTO43148 476 aaKnown RBP30.67■■■□□ 2.5
TSPAN4-202ENST00000397396 THSD7AQ9UPZ6 1657 aa30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 NKX1-1Q15270 411 aaPredicted RBP30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 IL17REQ8NFR9 667 aa30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 CDCA7LQ96GN5 454 aa30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 CFAP44Q96MT7 982 aa30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 THUMPD2Q9BTF0 503 aaKnown RBP30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 BABAM1Q9NWV8 329 aa30.66■■■□□ 2.5
TSPAN4-202ENST00000397396 TEFQ10587 303 aa30.65■■■□□ 2.5
TSPAN4-202ENST00000397396 MPRIPQ6WCQ1 1025 aa30.65■■■□□ 2.5
TSPAN4-202ENST00000397396 TRMT2AQ8IZ69 625 aaKnown RBP30.65■■■□□ 2.5
TSPAN4-202ENST00000397396 DDX54Q8TDD1 881 aaKnown RBP30.65■■■□□ 2.5
TSPAN4-202ENST00000397396 DUSP27Q5VZP5 1158 aa30.63■■■□□ 2.49
TSPAN4-202ENST00000397396 SCN11AQ9UI33 1791 aa30.63■■■□□ 2.49
TSPAN4-202ENST00000397396 KDM6AO15550 1401 aaPredicted RBP30.62■■■□□ 2.49
TSPAN4-202ENST00000397396 ZNF853P0CG23 659 aa30.62■■■□□ 2.49
TSPAN4-202ENST00000397396 MRC1P22897 1456 aa30.62■■■□□ 2.49
TSPAN4-202ENST00000397396 A0A0G2JS52 829 aa30.61■■■□□ 2.49
TSPAN4-202ENST00000397396 ONECUT3O60422 494 aaPredicted RBP30.61■■■□□ 2.49
TSPAN4-202ENST00000397396 MYT1Q01538 1121 aa30.61■■■□□ 2.49
TSPAN4-202ENST00000397396 TAF7Q15545 349 aaPredicted RBP30.6■■■□□ 2.49
TSPAN4-202ENST00000397396 SPINK5Q9NQ38 1064 aaPredicted RBP30.6■■■□□ 2.49
TSPAN4-202ENST00000397396 LAS1LQ9Y4W2 734 aaKnown RBP30.6■■■□□ 2.49
TSPAN4-202ENST00000397396 FANCIQ9NVI1 1328 aa30.59■■■□□ 2.49
TSPAN4-202ENST00000397396 LGR6Q9HBX8 967 aa30.59■■■□□ 2.49
TSPAN4-202ENST00000397396 VIRMAQ69YN4 1812 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-202ENST00000397396 ERVV-2B6SEH9 535 aa30.58■■■□□ 2.49
TSPAN4-202ENST00000397396 RBM6P78332 1123 aaKnown RBP30.58■■■□□ 2.49
TSPAN4-202ENST00000397396 CHL1O00533 1208 aa30.57■■■□□ 2.48
TSPAN4-202ENST00000397396 SLC52A2Q9HAB3 445 aa30.56■■■□□ 2.48
TSPAN4-202ENST00000397396 TSPYL4Q9UJ04 414 aa30.55■■■□□ 2.48
TSPAN4-202ENST00000397396 CT47B1P0C2W7 299 aaPredicted RBP30.54■■■□□ 2.48
TSPAN4-202ENST00000397396 MBIPQ9NS73 344 aa30.54■■■□□ 2.48
TSPAN4-202ENST00000397396 CABP4P57796 275 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms