RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 COG6Q9Y2V7 657 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 KIF4BQ2VIQ3 1234 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 TMCO4Q5TGY1 634 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 RABGAP1Q9Y3P9 1069 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 UPF3BQ9BZI7 483 aaKnown RBP9.33□□□□□ -0.92
TRPS1-203ENST00000395715 MAATS1Q7Z4T9 603 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 RSPH14Q9UHP6 348 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 A0A1W2PRG0 241 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 PAFAH1B1P43034 410 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 STMN1P16949 149 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 ERCC3P19447 782 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRPS1-203ENST00000395715 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 ZBTB17Q13105 803 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 CFAP100Q494V2 611 aa9.33□□□□□ -0.92
TRPS1-203ENST00000395715 HSF2BPO75031 334 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 PPFIBP2Q8ND30 876 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 PRR16Q569H4 304 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 PABPN1LA6NDY0 278 aaKnown RBP9.32□□□□□ -0.92
TRPS1-203ENST00000395715 LUC7L2Q9Y383 392 aaKnown RBP9.32□□□□□ -0.92
TRPS1-203ENST00000395715 IKBKGQ9Y6K9 419 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 STIM2Q9P246 746 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 SFPQP23246 707 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRPS1-203ENST00000395715 CEP57L1Q8IYX8 460 aa9.32□□□□□ -0.92
TRPS1-203ENST00000395715 GOLGA3Q08378 1498 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 KIF4AO95239 1232 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 USO1O60763 962 aaKnown RBP9.31□□□□□ -0.92
TRPS1-203ENST00000395715 CDC45O75419 566 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 SETDB1Q15047 1291 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 CCDC83Q8IWF9 413 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 CASQ2O14958 399 aaPredicted RBP9.31□□□□□ -0.92
TRPS1-203ENST00000395715 CTNNA2P26232 953 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 KRT85P78386 507 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 CTAGE6Q86UF2 777 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
TRPS1-203ENST00000395715 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
TRPS1-203ENST00000395715 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
TRPS1-203ENST00000395715 DNAI2Q9GZS0 605 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 SATB1Q01826 763 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 ZC4H2Q9NQZ6 224 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 MACROD2A1Z1Q3 448 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 CCDC121Q6ZUS5 278 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 VPS36Q86VN1 386 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 KRT222Q8N1A0 295 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 RRP7AQ9Y3A4 280 aaKnown RBP9.3□□□□□ -0.92
TRPS1-203ENST00000395715 CHMP2AO43633 222 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 PPFIA2O75334 1257 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 OTUD6BQ8N6M0 293 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 PRPF31Q8WWY3 499 aaKnown RBP9.3□□□□□ -0.92
TRPS1-203ENST00000395715 BAZ1BQ9UIG0 1483 aaKnown RBP9.3□□□□□ -0.92
TRPS1-203ENST00000395715 DRC1Q96MC2 740 aa9.3□□□□□ -0.92
TRPS1-203ENST00000395715 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 CEP128Q6ZU80 1094 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 DDX27Q96GQ7 796 aaKnown RBP9.29□□□□□ -0.92
TRPS1-203ENST00000395715 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 SSX2IPQ9Y2D8 614 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 NEK4P51957 841 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 NUP62CLQ9H1M0 184 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 BMP2KQ9NSY1 1161 aaPredicted RBP9.29□□□□□ -0.92
TRPS1-203ENST00000395715 CCDC155Q8N6L0 562 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 WDR33Q9C0J8 1336 aaKnown RBP9.29□□□□□ -0.92
TRPS1-203ENST00000395715 VCX3BQ9H321 246 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 SLC3A2P08195 630 aaKnown RBP9.29□□□□□ -0.92
TRPS1-203ENST00000395715 DNA2P51530 1060 aa9.29□□□□□ -0.92
TRPS1-203ENST00000395715 DDX12PQ92771 950 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 IQCGQ9H095 443 aaKnown RBP9.28□□□□□ -0.92
TRPS1-203ENST00000395715 RASSF4Q9H2L5 321 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 MAP3K7CLP57077 242 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 KIF27Q86VH2 1401 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 EPSTI1Q96J88 318 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 C16orf45Q96MC5 204 aaPredicted RBP9.28□□□□□ -0.92
TRPS1-203ENST00000395715 ATP11AP98196 1134 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 CACNA2D4Q7Z3S7 1137 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
TRPS1-203ENST00000395715 ZBTB16Q05516 673 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 FOXD1Q16676 465 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 LMNTD2Q8IXW0 634 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 ALS2CR12Q96Q35 445 aa9.28□□□□□ -0.92
TRPS1-203ENST00000395715 DDX58O95786 925 aaKnown RBP9.27□□□□□ -0.92
TRPS1-203ENST00000395715 CKAP4Q07065 602 aaKnown RBP9.27□□□□□ -0.92
TRPS1-203ENST00000395715 SMC1BQ8NDV3 1235 aa9.27□□□□□ -0.92
TRPS1-203ENST00000395715 STMN2Q93045 179 aa9.27□□□□□ -0.92
TRPS1-203ENST00000395715 SPATA32Q96LK8 384 aa9.27□□□□□ -0.92
TRPS1-203ENST00000395715 BICDL2A1A5D9 508 aa9.27□□□□□ -0.92
TRPS1-203ENST00000395715 ARL1P40616 181 aaPredicted RBP9.27□□□□□ -0.92
TRPS1-203ENST00000395715 CCDC110Q8TBZ0 833 aa9.27□□□□□ -0.92
TRPS1-203ENST00000395715 MGEA5O60502 916 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 ANKRD1Q15327 319 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 NEUROD6Q96NK8 337 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 CACNA2D3Q8IZS8 1091 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms