RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
CDC42SE2-202ENST00000395246 IRX6P78412 446 aaPredicted RBP18.34■□□□□ 0.53
CDC42SE2-202ENST00000395246 AEBP1Q8IUX7 1158 aa18.34■□□□□ 0.53
CDC42SE2-202ENST00000395246 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
CDC42SE2-202ENST00000395246 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
CDC42SE2-202ENST00000395246 C5P01031 1676 aa18.34■□□□□ 0.53
CDC42SE2-202ENST00000395246 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.53
CDC42SE2-202ENST00000395246 SULT6B1Q6IMI4 303 aa18.33■□□□□ 0.53
CDC42SE2-202ENST00000395246 SALL2Q9Y467 1007 aaPredicted RBP18.33■□□□□ 0.53
CDC42SE2-202ENST00000395246 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
CDC42SE2-202ENST00000395246 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
CDC42SE2-202ENST00000395246 GCP02774 474 aa18.32■□□□□ 0.52
CDC42SE2-202ENST00000395246 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
CDC42SE2-202ENST00000395246 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
CDC42SE2-202ENST00000395246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.522e-9■□□□□ 9.4
CDC42SE2-202ENST00000395246 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
CDC42SE2-202ENST00000395246 PLIN1O60240 522 aa18.31■□□□□ 0.52
CDC42SE2-202ENST00000395246 HAP1P54257 671 aaPredicted RBP18.31■□□□□ 0.52
CDC42SE2-202ENST00000395246 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
CDC42SE2-202ENST00000395246 HMOX1P09601 288 aa18.31■□□□□ 0.52
CDC42SE2-202ENST00000395246 SSH1Q8WYL5 1049 aa18.31■□□□□ 0.52
CDC42SE2-202ENST00000395246 TCERG1O14776 1098 aaKnown RBP18.3■□□□□ 0.52
CDC42SE2-202ENST00000395246 CCDC136Q96JN2 1154 aa18.3■□□□□ 0.52
CDC42SE2-202ENST00000395246 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
CDC42SE2-202ENST00000395246 NEFMP07197 916 aa18.29■□□□□ 0.52
CDC42SE2-202ENST00000395246 ZKSCAN2Q63HK3 967 aa18.29■□□□□ 0.52
CDC42SE2-202ENST00000395246 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
CDC42SE2-202ENST00000395246 ATF7IPQ6VMQ6 1270 aa18.29■□□□□ 0.52
CDC42SE2-202ENST00000395246 HOXB7P09629 217 aa18.29■□□□□ 0.52
CDC42SE2-202ENST00000395246 ERBB3P21860 1342 aa18.29■□□□□ 0.52
CDC42SE2-202ENST00000395246 BRINP3Q76B58 766 aa18.28■□□□□ 0.52
CDC42SE2-202ENST00000395246 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
CDC42SE2-202ENST00000395246 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
CDC42SE2-202ENST00000395246 RLBP1P12271 317 aa18.28■□□□□ 0.52
CDC42SE2-202ENST00000395246 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
CDC42SE2-202ENST00000395246 RREB1Q92766 1687 aa18.27■□□□□ 0.52
CDC42SE2-202ENST00000395246 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
CDC42SE2-202ENST00000395246 TRIM27P14373 513 aa18.26■□□□□ 0.51
CDC42SE2-202ENST00000395246 PTPRCP08575 1304 aa18.26■□□□□ 0.51
CDC42SE2-202ENST00000395246 ATF3P18847 181 aa18.26■□□□□ 0.51
CDC42SE2-202ENST00000395246 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
CDC42SE2-202ENST00000395246 AMPHP49418 695 aa18.25■□□□□ 0.51
CDC42SE2-202ENST00000395246 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
CDC42SE2-202ENST00000395246 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
CDC42SE2-202ENST00000395246 ZBTB40Q9NUA8 1239 aa18.25■□□□□ 0.51
CDC42SE2-202ENST00000395246 IPO8O15397 1037 aaKnown RBP18.24■□□□□ 0.51
CDC42SE2-202ENST00000395246 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
CDC42SE2-202ENST00000395246 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
CDC42SE2-202ENST00000395246 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
CDC42SE2-202ENST00000395246 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
CDC42SE2-202ENST00000395246 DZIP1LQ8IYY4 767 aaKnown RBP18.23■□□□□ 0.51
CDC42SE2-202ENST00000395246 MEGF6O75095 1541 aa18.23■□□□□ 0.51
CDC42SE2-202ENST00000395246 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
CDC42SE2-202ENST00000395246 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
CDC42SE2-202ENST00000395246 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
CDC42SE2-202ENST00000395246 PHLPP1O60346 1717 aa18.22■□□□□ 0.51
CDC42SE2-202ENST00000395246 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
CDC42SE2-202ENST00000395246 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
CDC42SE2-202ENST00000395246 C8orf58Q8NAV2 365 aa18.21■□□□□ 0.51
CDC42SE2-202ENST00000395246 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
CDC42SE2-202ENST00000395246 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
CDC42SE2-202ENST00000395246 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
CDC42SE2-202ENST00000395246 FOXO3O43524 673 aa18.2■□□□□ 0.5
CDC42SE2-202ENST00000395246 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
CDC42SE2-202ENST00000395246 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 ZBTB7BO15156 539 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 AXIN2Q9Y2T1 843 aa18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 ZNF335Q9H4Z2 1342 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-202ENST00000395246 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
CDC42SE2-202ENST00000395246 TNS2Q63HR2 1409 aa18.18■□□□□ 0.5
CDC42SE2-202ENST00000395246 HSPA2P54652 639 aa18.17■□□□□ 0.5
CDC42SE2-202ENST00000395246 SMC5Q8IY18 1101 aa18.17■□□□□ 0.5
CDC42SE2-202ENST00000395246 KCPQ6ZWJ8 1503 aa18.17■□□□□ 0.5
CDC42SE2-202ENST00000395246 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
CDC42SE2-202ENST00000395246 ITGB4P16144 1822 aa18.16■□□□□ 0.5
CDC42SE2-202ENST00000395246 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
CDC42SE2-202ENST00000395246 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
CDC42SE2-202ENST00000395246 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
CDC42SE2-202ENST00000395246 IGHDP01880 384 aa18.16■□□□□ 0.5
CDC42SE2-202ENST00000395246 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
CDC42SE2-202ENST00000395246 PCDHB15Q9Y5E8 787 aa18.15■□□□□ 0.5
CDC42SE2-202ENST00000395246 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
CDC42SE2-202ENST00000395246 API5Q9BZZ5 524 aaKnown RBP18.15■□□□□ 0.5
CDC42SE2-202ENST00000395246 NKX1-1Q15270 411 aaPredicted RBP18.14■□□□□ 0.5
CDC42SE2-202ENST00000395246 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.5
CDC42SE2-202ENST00000395246 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
CDC42SE2-202ENST00000395246 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
CDC42SE2-202ENST00000395246 BACH2Q9BYV9 841 aa18.13■□□□□ 0.49
CDC42SE2-202ENST00000395246 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
CDC42SE2-202ENST00000395246 CHMP4AQ9BY43 222 aa18.13■□□□□ 0.49
CDC42SE2-202ENST00000395246 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
CDC42SE2-202ENST00000395246 MCM10Q7L590 875 aa18.12■□□□□ 0.49
CDC42SE2-202ENST00000395246 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
CDC42SE2-202ENST00000395246 TMEM57Q8N5G2 664 aa18.11■□□□□ 0.49
CDC42SE2-202ENST00000395246 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
CDC42SE2-202ENST00000395246 TJP1Q07157 1748 aa18.1■□□□□ 0.49
CDC42SE2-202ENST00000395246 COL15A1P39059 1388 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms