RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 NBPF6Q5VWK0 638 aa32.02■■■□□ 2.72
CTF1-202ENST00000395019 ERICH6BQ5W0A0 696 aa32.02■■■□□ 2.72
CTF1-202ENST00000395019 NBPF4Q96M43 638 aa32.02■■■□□ 2.72
CTF1-202ENST00000395019 USP21Q9UK80 565 aa32.02■■■□□ 2.72
CTF1-202ENST00000395019 CSB-PGBD3P0DP91 1061 aa32.01■■■□□ 2.72
CTF1-202ENST00000395019 KDRP35968 1356 aa32.01■■■□□ 2.72
CTF1-202ENST00000395019 UNC5CLQ8IV45 518 aa32.01■■■□□ 2.72
CTF1-202ENST00000395019 USHBP1Q8N6Y0 703 aa32.01■■■□□ 2.72
CTF1-202ENST00000395019 EYA1Q99502 592 aa32.01■■■□□ 2.72
CTF1-202ENST00000395019 IL16Q14005 1332 aa32■■■□□ 2.71
CTF1-202ENST00000395019 IRX6P78412 446 aaPredicted RBP31.99■■■□□ 2.71
CTF1-202ENST00000395019 RRP1P56182 461 aaKnown RBP31.97■■■□□ 2.71
CTF1-202ENST00000395019 TOM1L2Q6ZVM7 507 aa31.97■■■□□ 2.71
CTF1-202ENST00000395019 MYH16Q9H6N6 1097 aa31.97■■■□□ 2.71
CTF1-202ENST00000395019 NLRP2Q9NX02 1062 aa31.97■■■□□ 2.71
CTF1-202ENST00000395019 CRB1P82279 1406 aa31.97■■■□□ 2.71
CTF1-202ENST00000395019 WNK3Q9BYP7 1800 aa31.97■■■□□ 2.71
CTF1-202ENST00000395019 NCAPD2Q15021 1401 aa31.95■■■□□ 2.71
CTF1-202ENST00000395019 USP35Q9P2H5 1018 aa31.94■■■□□ 2.7
CTF1-202ENST00000395019 LMOD3Q0VAK6 560 aa31.93■■■□□ 2.7
CTF1-202ENST00000395019 ATRNO75882 1429 aa31.93■■■□□ 2.7
CTF1-202ENST00000395019 GLI3P10071 1580 aa31.92■■■□□ 2.7
CTF1-202ENST00000395019 RGS17Q9UGC6 210 aaPredicted RBP31.92■■■□□ 2.7
CTF1-202ENST00000395019 VPS72Q15906 364 aa31.91■■■□□ 2.7
CTF1-202ENST00000395019 CARD10Q9BWT7 1032 aa31.91■■■□□ 2.7
CTF1-202ENST00000395019 SPATA31A5Q5VU36 1347 aa31.91■■■□□ 2.7
CTF1-202ENST00000395019 SPATA31A7Q8IWB4 1347 aa31.91■■■□□ 2.7
CTF1-202ENST00000395019 SPATA31A1Q5TZJ5 1347 aa31.9■■■□□ 2.7
CTF1-202ENST00000395019 CALD1Q05682 793 aaKnown RBP31.89■■■□□ 2.7
CTF1-202ENST00000395019 CCDC9Q9Y3X0 531 aaKnown RBP31.89■■■□□ 2.7
CTF1-202ENST00000395019 DLG5Q8TDM6 1919 aa31.88■■■□□ 2.69
CTF1-202ENST00000395019 MEGF6O75095 1541 aa31.87■■■□□ 2.69
CTF1-202ENST00000395019 QTRT2Q9H974 415 aaKnown RBP31.86■■■□□ 2.69
CTF1-202ENST00000395019 FANCIQ9NVI1 1328 aa31.85■■■□□ 2.69
CTF1-202ENST00000395019 TRPC5Q9UL62 973 aaPredicted RBP31.84■■■□□ 2.69
CTF1-202ENST00000395019 PARP4Q9UKK3 1724 aaKnown RBP31.84■■■□□ 2.69
CTF1-202ENST00000395019 ZNF772Q68DY9 489 aaPredicted RBP31.82■■■□□ 2.68
CTF1-202ENST00000395019 GAS2L2Q8NHY3 880 aa31.82■■■□□ 2.68
CTF1-202ENST00000395019 DISP2A7MBM2 1401 aa31.82■■■□□ 2.68
CTF1-202ENST00000395019 SHANK3Q9BYB0 1731 aa31.81■■■□□ 2.68
CTF1-202ENST00000395019 MTHFSDQ2M296 383 aaKnown RBP31.81■■■□□ 2.68
CTF1-202ENST00000395019 TSR2Q969E8 191 aaKnown RBP31.81■■■□□ 2.68
CTF1-202ENST00000395019 GJD4Q96KN9 370 aaPredicted RBP31.81■■■□□ 2.68
CTF1-202ENST00000395019 CT47B1P0C2W7 299 aaPredicted RBP31.8■■■□□ 2.68
CTF1-202ENST00000395019 THUMPD2Q9BTF0 503 aaKnown RBP31.8■■■□□ 2.68
CTF1-202ENST00000395019 IFT57Q9NWB7 429 aa31.79■■■□□ 2.68
CTF1-202ENST00000395019 POTEAQ6S8J7 498 aa31.78■■■□□ 2.68
CTF1-202ENST00000395019 PPP4R2Q9NY27 417 aa31.78■■■□□ 2.68
CTF1-202ENST00000395019 PKD1L3Q7Z443 1732 aa31.78■■■□□ 2.68
CTF1-202ENST00000395019 THSD7AQ9UPZ6 1657 aa31.78■■■□□ 2.68
CTF1-202ENST00000395019 ZNF853P0CG23 659 aa31.78■■■□□ 2.68
CTF1-202ENST00000395019 FAM98CQ17RN3 349 aaKnown RBP31.78■■■□□ 2.68
CTF1-202ENST00000395019 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.78■■■□□ 2.68
CTF1-202ENST00000395019 LRRC37A3O60309 1634 aa31.77■■■□□ 2.68
CTF1-202ENST00000395019 GNAI1P63096 354 aa31.77■■■□□ 2.68
CTF1-202ENST00000395019 PLIN1O60240 522 aa31.75■■■□□ 2.67
CTF1-202ENST00000395019 OVOS2A0A0G2JMS6 1433 aa31.75■■■□□ 2.67
CTF1-202ENST00000395019 IL2RBP14784 551 aa31.75■■■□□ 2.67
CTF1-202ENST00000395019 EXOSC9Q06265 439 aaKnown RBP31.75■■■□□ 2.67
CTF1-202ENST00000395019 THRAP3Q9Y2W1 955 aaKnown RBP31.75■■■□□ 2.67
CTF1-202ENST00000395019 RARSP54136 660 aaKnown RBP31.74■■■□□ 2.67
CTF1-202ENST00000395019 DCTN1Q14203 1278 aa31.74■■■□□ 2.67
CTF1-202ENST00000395019 BARGINQ6ZT62 677 aa31.74■■■□□ 2.67
CTF1-202ENST00000395019 CFAP44Q96MT7 982 aa31.74■■■□□ 2.67
CTF1-202ENST00000395019 HTATSF1O43719 755 aaKnown RBP31.73■■■□□ 2.67
CTF1-202ENST00000395019 RAPGEF4Q8WZA2 1011 aa31.73■■■□□ 2.67
CTF1-202ENST00000395019 BCAR3O75815 825 aa31.72■■■□□ 2.67
CTF1-202ENST00000395019 BRWD3Q6RI45 1802 aa31.72■■■□□ 2.67
CTF1-202ENST00000395019 LAS1LQ9Y4W2 734 aaKnown RBP31.71■■■□□ 2.67
CTF1-202ENST00000395019 TATP17735 454 aaPredicted RBP31.71■■■□□ 2.67
CTF1-202ENST00000395019 RTF1Q92541 710 aaKnown RBP31.7■■■□□ 2.66
CTF1-202ENST00000395019 MCM10Q7L590 875 aa31.69■■■□□ 2.66
CTF1-202ENST00000395019 VIRMAQ69YN4 1812 aaKnown RBP31.68■■■□□ 2.66
CTF1-202ENST00000395019 MBIPQ9NS73 344 aa31.67■■■□□ 2.66
CTF1-202ENST00000395019 RBM6P78332 1123 aaKnown RBP31.67■■■□□ 2.66
CTF1-202ENST00000395019 GNAT3A8MTJ3 354 aa31.66■■■□□ 2.66
CTF1-202ENST00000395019 MAP3K5Q99683 1374 aa31.66■■■□□ 2.66
CTF1-202ENST00000395019 TNS2Q63HR2 1409 aa31.65■■■□□ 2.66
CTF1-202ENST00000395019 ONECUT3O60422 494 aaPredicted RBP31.64■■■□□ 2.66
CTF1-202ENST00000395019 EXOC6Q8TAG9 804 aa31.64■■■□□ 2.65
CTF1-202ENST00000395019 A0A0G2JS52 829 aa31.63■■■□□ 2.65
CTF1-202ENST00000395019 CHL1O00533 1208 aa31.63■■■□□ 2.65
CTF1-202ENST00000395019 RXRBP28702 533 aa31.63■■■□□ 2.65
CTF1-202ENST00000395019 MYT1Q01538 1121 aa31.63■■■□□ 2.65
CTF1-202ENST00000395019 AMOTQ4VCS5 1084 aa31.63■■■□□ 2.65
CTF1-202ENST00000395019 PLEKHO1Q53GL0 409 aaPredicted RBP31.63■■■□□ 2.65
CTF1-202ENST00000395019 C20orf194Q5TEA3 1177 aa31.62■■■□□ 2.65
CTF1-202ENST00000395019 ZNF428Q96B54 188 aa31.62■■■□□ 2.65
CTF1-202ENST00000395019 SEPT12Q8IYM1 358 aa31.61■■■□□ 2.65
CTF1-202ENST00000395019 ZCRB1Q8TBF4 217 aaKnown RBP31.61■■■□□ 2.65
CTF1-202ENST00000395019 CDCA7Q9BWT1 371 aaPredicted RBP31.61■■■□□ 2.65
CTF1-202ENST00000395019 RGS12O14924 1447 aa31.61■■■□□ 2.65
CTF1-202ENST00000395019 CRBNQ96SW2 442 aa31.6■■■□□ 2.65
CTF1-202ENST00000395019 CYP27B1O15528 508 aa31.59■■■□□ 2.65
CTF1-202ENST00000395019 DDB1Q16531 1140 aa31.59■■■□□ 2.65
CTF1-202ENST00000395019 PLEKHG2Q9H7P9 1386 aa31.58■■■□□ 2.65
CTF1-202ENST00000395019 EP400Q96L91 3159 aa31.58■■■□□ 2.65
CTF1-202ENST00000395019 EXOC5O00471 708 aa31.57■■■□□ 2.64
CTF1-202ENST00000395019 PDE3AQ14432 1141 aa31.57■■■□□ 2.64
CTF1-202ENST00000395019 ZNF530Q6P9A1 599 aaPredicted RBP31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms