RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TXLNBQ8N3L3 684 aa20.29■□□□□ 0.84
SIN3A-203ENST00000394949 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
SIN3A-203ENST00000394949 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
SIN3A-203ENST00000394949 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
SIN3A-203ENST00000394949 ATAD2Q6PL18 1390 aa20.28■□□□□ 0.84
SIN3A-203ENST00000394949 DNAJC2Q99543 621 aaKnown RBP20.28■□□□□ 0.84
SIN3A-203ENST00000394949 NESP48681 1621 aa20.27■□□□□ 0.84
SIN3A-203ENST00000394949 NFE2L2Q16236 605 aa20.27■□□□□ 0.84
SIN3A-203ENST00000394949 IQCEQ6IPM2 695 aa20.27■□□□□ 0.84
SIN3A-203ENST00000394949 BAG4O95429 457 aaKnown RBP20.27■□□□□ 0.83
SIN3A-203ENST00000394949 SH2B1Q9NRF2 756 aaPredicted RBP20.27■□□□□ 0.83
SIN3A-203ENST00000394949 DEF6Q9H4E7 631 aa20.26■□□□□ 0.83
SIN3A-203ENST00000394949 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
SIN3A-203ENST00000394949 ZMYND15Q9H091 742 aa20.26■□□□□ 0.83
SIN3A-203ENST00000394949 LUC7LQ9NQ29 371 aaKnown RBP20.26■□□□□ 0.83
SIN3A-203ENST00000394949 GOLGA6L10A6NI86 522 aa20.26■□□□□ 0.83
SIN3A-203ENST00000394949 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
SIN3A-203ENST00000394949 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.832e-7■■■■□ 20.4
SIN3A-203ENST00000394949 STK3Q13188 491 aa20.25■□□□□ 0.83
SIN3A-203ENST00000394949 RPRD2Q5VT52 1461 aaKnown RBP20.25■□□□□ 0.83
SIN3A-203ENST00000394949 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
SIN3A-203ENST00000394949 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
SIN3A-203ENST00000394949 EPS15P42566 896 aa20.25■□□□□ 0.83
SIN3A-203ENST00000394949 NSD3Q9BZ95 1437 aa20.24■□□□□ 0.83
SIN3A-203ENST00000394949 ZSCAN12O43309 604 aa20.24■□□□□ 0.83
SIN3A-203ENST00000394949 ERICH4A6NGS2 130 aa20.24■□□□□ 0.83
SIN3A-203ENST00000394949 ZNF530Q6P9A1 599 aaPredicted RBP20.24■□□□□ 0.83
SIN3A-203ENST00000394949 ANO10Q9NW15 660 aa20.24■□□□□ 0.83
SIN3A-203ENST00000394949 BRPF1P55201 1214 aaPredicted RBP20.23■□□□□ 0.83
SIN3A-203ENST00000394949 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
SIN3A-203ENST00000394949 CCDC43Q96MW1 224 aaKnown RBP20.23■□□□□ 0.83
SIN3A-203ENST00000394949 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
SIN3A-203ENST00000394949 ANKLE2Q86XL3 938 aa20.23■□□□□ 0.83
SIN3A-203ENST00000394949 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
SIN3A-203ENST00000394949 CTAGE5O15320 804 aa20.22■□□□□ 0.83
SIN3A-203ENST00000394949 CDKL5O76039 1030 aa20.22■□□□□ 0.83
SIN3A-203ENST00000394949 MX1P20591 662 aa20.22■□□□□ 0.83
SIN3A-203ENST00000394949 RAPGEF3O95398 923 aa20.22■□□□□ 0.83
SIN3A-203ENST00000394949 TRIM22Q8IYM9 498 aa20.22■□□□□ 0.83
SIN3A-203ENST00000394949 ERLIN2O94905 339 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 TNNT1P13805 278 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
SIN3A-203ENST00000394949 CASTP20810 708 aaKnown RBP20.21■□□□□ 0.83
SIN3A-203ENST00000394949 STIM1Q13586 685 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 RAB11FIP3O75154 756 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 HS1BP3Q53T59 392 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 CWC27Q6UX04 472 aaKnown RBP20.21■□□□□ 0.83
SIN3A-203ENST00000394949 PRM3Q9NNZ6 103 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 CAVIN2O95810 425 aa20.21■□□□□ 0.83
SIN3A-203ENST00000394949 DDX19AQ9NUU7 478 aaKnown RBP20.21■□□□□ 0.83
SIN3A-203ENST00000394949 SRGAP3O43295 1099 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 FAM177A1Q8N128 213 aaPredicted RBP20.2■□□□□ 0.82
SIN3A-203ENST00000394949 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 GOLGA6L7A0A1B0GV03 622 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 ATP2B1P20020 1258 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 CT47A1Q5JQC4 288 aaPredicted RBP20.2■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC61Q9Y6R9 512 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC181Q5TID7 509 aa20.2■□□□□ 0.82
SIN3A-203ENST00000394949 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC102AQ96A19 550 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 PTPN23Q9H3S7 1636 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 GLRX3O76003 335 aaKnown RBP20.19■□□□□ 0.82
SIN3A-203ENST00000394949 CLIP2Q9UDT6 1046 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 LRSAM1Q6UWE0 723 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 SLC26A8Q96RN1 970 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.19■□□□□ 0.82
SIN3A-203ENST00000394949 IGHDP01880 384 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 GSDMDP57764 484 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC158Q5M9N0 1113 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
SIN3A-203ENST00000394949 KIF1BPQ96EK5 621 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 CABP4P57796 275 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 ZSCAN23Q3MJ62 389 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 SNX21Q969T3 373 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 FYB1O15117 783 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 ADCY5O95622 1261 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 EPRSP07814 1512 aaKnown RBP20.18■□□□□ 0.82
SIN3A-203ENST00000394949 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
SIN3A-203ENST00000394949 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
SIN3A-203ENST00000394949 TBC1D9Q6ZT07 1266 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 ARHGAP29Q52LW3 1261 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 AACSQ86V21 672 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 PAXBP1Q9Y5B6 917 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
SIN3A-203ENST00000394949 TRIM27P14373 513 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 CFAP100Q494V2 611 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 C8orf34Q49A92 452 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC83Q8IWF9 413 aa20.17■□□□□ 0.82
SIN3A-203ENST00000394949 EPB41L2O43491 1005 aaKnown RBP20.16■□□□□ 0.82
SIN3A-203ENST00000394949 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
SIN3A-203ENST00000394949 CAMK4Q16566 473 aa20.16■□□□□ 0.82
SIN3A-203ENST00000394949 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
SIN3A-203ENST00000394949 GNL3LQ9NVN8 582 aaKnown RBP20.16■□□□□ 0.82
SIN3A-203ENST00000394949 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms