RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 RTF1Q92541 710 aaKnown RBP18.2■□□□□ 0.5
RNF41-202ENST00000394013 IP6K1Q92551 441 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 ANP32EQ9BTT0 268 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 TSPYL4Q9UJ04 414 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
RNF41-202ENST00000394013 USP54Q70EL1 1684 aa18.19■□□□□ 0.5
RNF41-202ENST00000394013 SEC24BO95487 1268 aa18.19■□□□□ 0.5
RNF41-202ENST00000394013 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
RNF41-202ENST00000394013 RWDD1Q9H446 243 aaPredicted RBP18.19■□□□□ 0.5
RNF41-202ENST00000394013 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
RNF41-202ENST00000394013 IPO9Q96P70 1041 aaKnown RBP18.18■□□□□ 0.5
RNF41-202ENST00000394013 MSH6P52701 1360 aa18.18■□□□□ 0.5
RNF41-202ENST00000394013 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
RNF41-202ENST00000394013 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
RNF41-202ENST00000394013 G2E3Q7L622 706 aa18.17■□□□□ 0.5
RNF41-202ENST00000394013 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
RNF41-202ENST00000394013 BRPF1P55201 1214 aaPredicted RBP18.17■□□□□ 0.5
RNF41-202ENST00000394013 GAS2L2Q8NHY3 880 aa18.16■□□□□ 0.5
RNF41-202ENST00000394013 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
RNF41-202ENST00000394013 KDM4FA0A1W2PPD8 638 aa18.15■□□□□ 0.5
RNF41-202ENST00000394013 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
RNF41-202ENST00000394013 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
RNF41-202ENST00000394013 NOP58Q9Y2X3 529 aaKnown RBP18.15■□□□□ 0.5
RNF41-202ENST00000394013 ABCC4O15439 1325 aa18.15■□□□□ 0.5
RNF41-202ENST00000394013 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
RNF41-202ENST00000394013 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.5
RNF41-202ENST00000394013 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
RNF41-202ENST00000394013 ATF3P18847 181 aa18.14■□□□□ 0.49
RNF41-202ENST00000394013 SLC4A3P48751 1232 aa18.14■□□□□ 0.49
RNF41-202ENST00000394013 ERICH6Q7L0X2 663 aa18.14■□□□□ 0.49
RNF41-202ENST00000394013 SIRT2Q8IXJ6 389 aa18.14■□□□□ 0.49
RNF41-202ENST00000394013 F6X3S4 739 aa18.13■□□□□ 0.49
RNF41-202ENST00000394013 RGS12O14924 1447 aa18.13■□□□□ 0.49
RNF41-202ENST00000394013 TRPM3Q9HCF6 1732 aaPredicted RBP18.13■□□□□ 0.49
RNF41-202ENST00000394013 MST1RQ04912 1400 aa18.13■□□□□ 0.49
RNF41-202ENST00000394013 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
RNF41-202ENST00000394013 AAMPQ13685 434 aa18.12■□□□□ 0.49
RNF41-202ENST00000394013 KCNH5Q8NCM2 988 aa18.12■□□□□ 0.49
RNF41-202ENST00000394013 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
RNF41-202ENST00000394013 KIF24Q5T7B8 1368 aa18.12■□□□□ 0.49
RNF41-202ENST00000394013 MAP3K5Q99683 1374 aa18.12■□□□□ 0.49
RNF41-202ENST00000394013 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
RNF41-202ENST00000394013 RGPD5Q99666 1765 aa18.11■□□□□ 0.49
RNF41-202ENST00000394013 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
RNF41-202ENST00000394013 KCNQ3O43525 872 aa18.11■□□□□ 0.49
RNF41-202ENST00000394013 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
RNF41-202ENST00000394013 KIAA0232Q92628 1395 aa18.1■□□□□ 0.49
RNF41-202ENST00000394013 MPRIPQ6WCQ1 1025 aa18.1■□□□□ 0.49
RNF41-202ENST00000394013 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
RNF41-202ENST00000394013 PXDNQ92626 1479 aa18.09■□□□□ 0.49
RNF41-202ENST00000394013 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
RNF41-202ENST00000394013 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
RNF41-202ENST00000394013 MED1Q15648 1581 aaPredicted RBP18.09■□□□□ 0.49
RNF41-202ENST00000394013 USP19O94966 1318 aa18.08■□□□□ 0.49
RNF41-202ENST00000394013 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.49
RNF41-202ENST00000394013 SLIT3O75094 1523 aa18.08■□□□□ 0.48
RNF41-202ENST00000394013 SLC4A10Q6U841 1118 aa18.08■□□□□ 0.48
RNF41-202ENST00000394013 LRRC37A3O60309 1634 aa18.07■□□□□ 0.48
RNF41-202ENST00000394013 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
RNF41-202ENST00000394013 ZNF530Q6P9A1 599 aaPredicted RBP18.07■□□□□ 0.48
RNF41-202ENST00000394013 MEIS3Q99687 375 aa18.06■□□□□ 0.48
RNF41-202ENST00000394013 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
RNF41-202ENST00000394013 XIRP1Q702N8 1843 aaKnown RBP18.04■□□□□ 0.48
RNF41-202ENST00000394013 ANKRD45Q5TZF3 282 aa18.04■□□□□ 0.48
RNF41-202ENST00000394013 ALS2Q96Q42 1657 aa18.04■□□□□ 0.48
RNF41-202ENST00000394013 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
RNF41-202ENST00000394013 LMTK3Q96Q04 1460 aa18.03■□□□□ 0.48
RNF41-202ENST00000394013 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
RNF41-202ENST00000394013 ANXA1P04083 346 aa18.03■□□□□ 0.48
RNF41-202ENST00000394013 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
RNF41-202ENST00000394013 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
RNF41-202ENST00000394013 NUCB1Q02818 461 aa18.03■□□□□ 0.48
RNF41-202ENST00000394013 NBR1Q14596 966 aa18.03■□□□□ 0.48
RNF41-202ENST00000394013 STRCQ7RTU9 1775 aa18.02■□□□□ 0.48
RNF41-202ENST00000394013 KIF1AQ12756 1690 aa18.02■□□□□ 0.48
RNF41-202ENST00000394013 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
RNF41-202ENST00000394013 APBB1O00213 710 aa18.01■□□□□ 0.47
RNF41-202ENST00000394013 PHRF1Q9P1Y6 1649 aaKnown RBP18.01■□□□□ 0.47
RNF41-202ENST00000394013 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
RNF41-202ENST00000394013 CHD1LQ86WJ1 897 aa18.01■□□□□ 0.47
RNF41-202ENST00000394013 NLRP2Q9NX02 1062 aa18.01■□□□□ 0.47
RNF41-202ENST00000394013 ERBB3P21860 1342 aa18.01■□□□□ 0.47
RNF41-202ENST00000394013 CEMIPQ8WUJ3 1361 aa18.01■□□□□ 0.47
RNF41-202ENST00000394013 CADPS2Q86UW7 1296 aa18■□□□□ 0.47
RNF41-202ENST00000394013 BRINP3Q76B58 766 aa18■□□□□ 0.47
RNF41-202ENST00000394013 FLIIQ13045 1269 aa17.99■□□□□ 0.47
RNF41-202ENST00000394013 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
RNF41-202ENST00000394013 ATP10DQ9P241 1426 aa17.99■□□□□ 0.47
RNF41-202ENST00000394013 PTPRCP08575 1304 aa17.98■□□□□ 0.47
RNF41-202ENST00000394013 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
RNF41-202ENST00000394013 C16orf71Q8IYS4 520 aaPredicted RBP17.98■□□□□ 0.47
RNF41-202ENST00000394013 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
RNF41-202ENST00000394013 FAM208AQ9UK61 1670 aaKnown RBP17.98■□□□□ 0.47
RNF41-202ENST00000394013 EIF4A1P60842 406 aaKnown RBP17.98■□□□□ 0.47
RNF41-202ENST00000394013 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
RNF41-202ENST00000394013 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
RNF41-202ENST00000394013 NPHP3Q7Z494 1330 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms