RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
SNORA40.2-201ENST00000390847 GTF2IP78347 998 aa8.36□□□□□ -1.07
SNORA40.2-201ENST00000390847 HPS1Q92902 700 aa8.36□□□□□ -1.07
SNORA40.2-201ENST00000390847 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
SNORA40.2-201ENST00000390847 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
SNORA40.2-201ENST00000390847 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
SNORA40.2-201ENST00000390847 DNAAF2Q9NVR5 837 aaKnown RBP8.35□□□□□ -1.07
SNORA40.2-201ENST00000390847 LILRA1O75019 489 aa8.34□□□□□ -1.07
SNORA40.2-201ENST00000390847 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
SNORA40.2-201ENST00000390847 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
SNORA40.2-201ENST00000390847 RBM19Q9Y4C8 960 aaKnown RBP8.34□□□□□ -1.07
SNORA40.2-201ENST00000390847 USP17L15C9J2P7 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L10C9JJH3 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L13C9JLJ4 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L12C9JPN9 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L11C9JVI0 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L21D6R901 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L18D6R9N7 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L22D6RA61 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L19D6RCP7 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L20D6RJB6 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 TIMP2P16035 220 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 CLDN10P78369 228 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 USP17L24Q0WX57 530 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 CBLBQ13191 982 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 PKDCCQ504Y2 493 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 CYP2U1Q7Z449 544 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 ARXQ96QS3 562 aa8.33□□□□□ -1.08
SNORA40.2-201ENST00000390847 FAM196BA6NMK8 535 aa8.32□□□□□ -1.08
SNORA40.2-201ENST00000390847 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
SNORA40.2-201ENST00000390847 KLF16Q9BXK1 252 aaPredicted RBP8.32□□□□□ -1.08
SNORA40.2-201ENST00000390847 OSBPL3Q9H4L5 887 aa8.32□□□□□ -1.08
SNORA40.2-201ENST00000390847 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 ATG7O95352 703 aa8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 CSB-PGBD3P0DP91 1061 aa8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 ADD1P35611 737 aaKnown RBP8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 PCDHGA11Q9Y5H2 935 aa8.31□□□□□ -1.08
SNORA40.2-201ENST00000390847 ADH1AP07327 375 aa8.3□□□□□ -1.08
SNORA40.2-201ENST00000390847 PTK7Q13308 1070 aa8.3□□□□□ -1.08
SNORA40.2-201ENST00000390847 CCDC102BQ68D86 513 aa8.3□□□□□ -1.08
SNORA40.2-201ENST00000390847 TPCN2Q8NHX9 752 aa8.3□□□□□ -1.08
SNORA40.2-201ENST00000390847 KIAA1024Q9UPX6 916 aa8.3□□□□□ -1.08
SNORA40.2-201ENST00000390847 RELBQ01201 579 aa8.29□□□□□ -1.08
SNORA40.2-201ENST00000390847 DPYDQ12882 1025 aa8.29□□□□□ -1.08
SNORA40.2-201ENST00000390847 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
SNORA40.2-201ENST00000390847 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
SNORA40.2-201ENST00000390847 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
SNORA40.2-201ENST00000390847 AGBL1Q96MI9 1066 aa8.29□□□□□ -1.08
SNORA40.2-201ENST00000390847 DGAT1O75907 488 aa8.28□□□□□ -1.08
SNORA40.2-201ENST00000390847 Q6ZVU0 165 aa8.28□□□□□ -1.08
SNORA40.2-201ENST00000390847 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
SNORA40.2-201ENST00000390847 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
SNORA40.2-201ENST00000390847 ARHGEF10LQ9HCE6 1279 aa8.28□□□□□ -1.08
SNORA40.2-201ENST00000390847 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
SNORA40.2-201ENST00000390847 ZBTB7BO15156 539 aaPredicted RBP8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 UPP2O95045 317 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 STAU1O95793 577 aaKnown RBP8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 GNRH1P01148 92 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 GDF10P55107 478 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 ELOAQ14241 798 aaKnown RBP8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 SIX5Q8N196 739 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
SNORA40.2-201ENST00000390847 MEN1O00255 615 aa8.26□□□□□ -1.09
SNORA40.2-201ENST00000390847 SEC13P55735 322 aa8.26□□□□□ -1.09
SNORA40.2-201ENST00000390847 MEIOBQ8N635 442 aa8.26□□□□□ -1.09
SNORA40.2-201ENST00000390847 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
SNORA40.2-201ENST00000390847 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
SNORA40.2-201ENST00000390847 SFI1A8K8P3 1242 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 AVPP01185 164 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 PTGIRP43119 386 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 SCNN1DP51172 638 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 TSEN34Q9BSV6 310 aaKnown RBP8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 ETNK1Q9HBU6 452 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 SERTAD1Q9UHV2 236 aa8.25□□□□□ -1.09
SNORA40.2-201ENST00000390847 A0A1W2PRU2 124 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 AXIN1O15169 862 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 PDE4CQ08493 712 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 CTC1Q2NKJ3 1217 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 NLRP3Q96P20 1036 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 ZNF358Q9NW07 568 aa8.24□□□□□ -1.09
SNORA40.2-201ENST00000390847 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 BACH1O14867 736 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 INHAP05111 366 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 BMP2P12643 396 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 C6orf118Q5T5N4 469 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 KDF1Q8NAX2 398 aaPredicted RBP8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 HINFPQ9BQA5 517 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 USTQ9Y2C2 406 aa8.23□□□□□ -1.09
SNORA40.2-201ENST00000390847 CARNS1A5YM72 827 aa8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 DKK1O94907 266 aa8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 BMP1P13497 986 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms