RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 AMOTL2Q9Y2J4 779 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 PCDHB11Q9Y5F2 797 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 PCDHGA11Q9Y5H2 935 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 RNF223E7ERA6 249 aa5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 DKK1O94907 266 aa5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 ATP2B4P23634 1241 aa5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 TRIM32Q13049 653 aa5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 PHLDB3Q6NSJ2 640 aa5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 POTEGQ6S5H5 508 aa5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 VASH1Q7L8A9 365 aaPredicted RBP5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 ZNF594Q96JF6 807 aaPredicted RBP5.02□□□□□ -1.61
TRAJ40-201ENST00000390497 PSME1Q06323 249 aa5.01□□□□□ -1.61
TRAJ40-201ENST00000390497 CDK15Q96Q40 435 aa5.01□□□□□ -1.61
TRAJ40-201ENST00000390497 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.01□□□□□ -1.61
TRAJ40-201ENST00000390497 PPEF1O14829 653 aaPredicted RBP5□□□□□ -1.61
TRAJ40-201ENST00000390497 BACH1O14867 736 aa5□□□□□ -1.61
TRAJ40-201ENST00000390497 TAS1R3Q7RTX0 852 aa5□□□□□ -1.61
TRAJ40-201ENST00000390497 EHBP1Q8NDI1 1231 aa5□□□□□ -1.61
TRAJ40-201ENST00000390497 TPCN2Q8NHX9 752 aa5□□□□□ -1.61
TRAJ40-201ENST00000390497 HINFPQ9BQA5 517 aa5□□□□□ -1.61
TRAJ40-201ENST00000390497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5□□□□□ -1.61
TRAJ40-201ENST00000390497 ERVH48-1M5A8F1 160 aa4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 PTCD1O75127 700 aaKnown RBP4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 RC3H1Q5TC82 1133 aaKnown RBP4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 CC2D2BQ6DHV5 1058 aa4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 PPP1R18Q6NYC8 613 aa4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 GAS2L2Q8NHY3 880 aa4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 EGFL7Q9UHF1 273 aa4.99□□□□□ -1.61
TRAJ40-201ENST00000390497 SOWAHDA6NJG2 315 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 SFI1A8K8P3 1242 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 ERVK-9P63128 1117 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 SKOR1P84550 965 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 NR5A1Q13285 461 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 INTS6LQ5JSJ4 861 aaKnown RBP4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 RNF166Q96A37 237 aaPredicted RBP4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 COL26A1Q96A83 441 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 CXXC1Q9P0U4 656 aaPredicted RBP4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 KIAA1024Q9UPX6 916 aa4.98□□□□□ -1.61
TRAJ40-201ENST00000390497 WASLO00401 505 aaPredicted RBP4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 PRMT3O60678 531 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 GNRH1P01148 92 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 WEE1P30291 646 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 GRM5P41594 1212 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 MYT1Q01538 1121 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 ARID5BQ14865 1188 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 OCLNQ16625 522 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 ESCO1Q5FWF5 840 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 SLAIN2Q9P270 581 aa4.97□□□□□ -1.61
TRAJ40-201ENST00000390497 E9PSI1 815 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 SIAH2O43255 324 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 RAB15P59190 212 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 SF3B2Q13435 895 aaKnown RBP4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 IFFO2Q5TF58 517 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 PRIMPOLQ96LW4 560 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 SLC4A9Q96Q91 983 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 PGPEP1Q9NXJ5 209 aa4.96□□□□□ -1.62
TRAJ40-201ENST00000390497 WNT7AO00755 349 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 FOXO3O43524 673 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 ADH1CP00326 375 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 INHAP05111 366 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 IGFBP4P22692 258 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 SLC19A1P41440 591 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 FKBP4Q02790 459 aaKnown RBP eCLIP4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 PLA2G2CQ5R387 149 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 CYP2U1Q7Z449 544 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 CCDC116Q8IYX3 515 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 EMILIN1Q9Y6C2 1016 aa4.95□□□□□ -1.62
TRAJ40-201ENST00000390497 ICMTO60725 284 aa4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 GDF10P55107 478 aa4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 MARSP56192 900 aaKnown RBP4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 FOXD4L5Q5VV16 416 aaPredicted RBP4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 STAG2Q8N3U4 1231 aa4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 TSEN2Q8NCE0 465 aaKnown RBP4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 FOXD4L4Q8WXT5 416 aaPredicted RBP4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 VTI1AQ96AJ9 217 aa4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 OSBPL3Q9H4L5 887 aa4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 ZNF358Q9NW07 568 aa4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 BIN2Q9UBW5 565 aaPredicted RBP4.94□□□□□ -1.62
TRAJ40-201ENST00000390497 ATAD2Q6PL18 1390 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 TMEM229AB2RXF0 380 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 ABL1P00519 1130 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 FSHRP23945 695 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 SCTRP47872 440 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 SERPINB4P48594 390 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 RBM25P49756 843 aaKnown RBP4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 PPP1R26Q5T8A7 1209 aaPredicted RBP4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 LIAT1Q6ZQX7 453 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 SPNS2Q8IVW8 549 aa4.93□□□□□ -1.62
TRAJ40-201ENST00000390497 RBM47A0AV96 593 aaKnown RBP4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 CDK2AP1O14519 115 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 C21orf2O43822 256 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 LILRA1O75019 489 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 FAM13AO94988 1023 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 SCNN1DP51172 638 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 GLYCTKQ8IVS8 523 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 ZNF784Q8NCA9 323 aaPredicted RBP4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 GTF3C2Q8WUA4 911 aaPredicted RBP4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 XAGE2Q96GT9 111 aa4.92□□□□□ -1.62
TRAJ40-201ENST00000390497 BCL11AQ9H165 835 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms