RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
TRAV40-201ENST00000390467 TSGA10IPQ3SY00 556 aa7.75□□□□□ -1.17
TRAV40-201ENST00000390467 POM121Q96HA1 1249 aa7.75□□□□□ -1.17
TRAV40-201ENST00000390467 PRM3Q9NNZ6 103 aa7.75□□□□□ -1.17
TRAV40-201ENST00000390467 SLC35F4A4IF30 521 aa7.74□□□□□ -1.17
TRAV40-201ENST00000390467 TRAK2O60296 914 aa7.74□□□□□ -1.17
TRAV40-201ENST00000390467 EIF4G2P78344 907 aaKnown RBP eCLIP7.74□□□□□ -1.17
TRAV40-201ENST00000390467 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
TRAV40-201ENST00000390467 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
TRAV40-201ENST00000390467 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
TRAV40-201ENST00000390467 A0A1W2PRU2 124 aa7.73□□□□□ -1.17
TRAV40-201ENST00000390467 MEN1O00255 615 aa7.73□□□□□ -1.17
TRAV40-201ENST00000390467 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
TRAV40-201ENST00000390467 CYP2U1Q7Z449 544 aa7.72□□□□□ -1.17
TRAV40-201ENST00000390467 GPR161Q8N6U8 529 aaKnown RBP7.72□□□□□ -1.17
TRAV40-201ENST00000390467 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
TRAV40-201ENST00000390467 RHOQP17081 205 aa7.71□□□□□ -1.18
TRAV40-201ENST00000390467 RNF144AP50876 292 aaPredicted RBP7.71□□□□□ -1.18
TRAV40-201ENST00000390467 INSM1Q01101 510 aaPredicted RBP7.71□□□□□ -1.18
TRAV40-201ENST00000390467 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
TRAV40-201ENST00000390467 ITGA6P23229 1130 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 KRT76Q01546 638 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 CLN3Q13286 438 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 WASHC4Q2M389 1173 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 RNF135Q8IUD6 432 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 DOLKQ9UPQ8 538 aa7.7□□□□□ -1.18
TRAV40-201ENST00000390467 STAU1O95793 577 aaKnown RBP7.69□□□□□ -1.18
TRAV40-201ENST00000390467 SLFNL1Q499Z3 407 aa7.69□□□□□ -1.18
TRAV40-201ENST00000390467 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
TRAV40-201ENST00000390467 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
TRAV40-201ENST00000390467 CHIC2Q9UKJ5 165 aa7.69□□□□□ -1.18
TRAV40-201ENST00000390467 IL2RAP01589 272 aa7.68□□□□□ -1.18
TRAV40-201ENST00000390467 GPC1P35052 558 aa7.68□□□□□ -1.18
TRAV40-201ENST00000390467 PIK3CDO00329 1044 aa7.67□□□□□ -1.18
TRAV40-201ENST00000390467 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
TRAV40-201ENST00000390467 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
TRAV40-201ENST00000390467 NANOS1Q8WY41 292 aaKnown RBP7.67□□□□□ -1.18
TRAV40-201ENST00000390467 STK17AQ9UEE5 414 aa7.67□□□□□ -1.18
TRAV40-201ENST00000390467 CDC14CA4D256 554 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 TMEM132AQ24JP5 1023 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 VWA5B2Q8N398 1253 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 ZSCAN1Q8NBB4 408 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 GRIP2Q9C0E4 1043 aa7.66□□□□□ -1.18
TRAV40-201ENST00000390467 POM121CA8CG34 1229 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 GNRH1P01148 92 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
TRAV40-201ENST00000390467 POU4F2Q12837 409 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 ESF1Q9H501 851 aaKnown RBP7.65□□□□□ -1.18
TRAV40-201ENST00000390467 HRH3Q9Y5N1 445 aa7.65□□□□□ -1.18
TRAV40-201ENST00000390467 SOX11P35716 441 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 FLIIQ13045 1269 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
TRAV40-201ENST00000390467 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 ADAMTS19Q8TE59 1207 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 ESYT1Q9BSJ8 1104 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
TRAV40-201ENST00000390467 ALG2Q9H553 416 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 ETNK1Q9HBU6 452 aa7.64□□□□□ -1.19
TRAV40-201ENST00000390467 SPATA31C2B4DYI2 1134 aa7.63□□□□□ -1.19
TRAV40-201ENST00000390467 XAGE2Q96GT9 111 aa7.63□□□□□ -1.19
TRAV40-201ENST00000390467 CNTNAP3BQ96NU0 1288 aa7.63□□□□□ -1.19
TRAV40-201ENST00000390467 CNTNAP3Q9BZ76 1288 aa7.63□□□□□ -1.19
TRAV40-201ENST00000390467 FHDC1Q9C0D6 1143 aaPredicted RBP7.63□□□□□ -1.19
TRAV40-201ENST00000390467 SCNN1DP51172 638 aa7.62□□□□□ -1.19
TRAV40-201ENST00000390467 CENPCQ03188 943 aa7.62□□□□□ -1.19
TRAV40-201ENST00000390467 USP4Q13107 963 aa7.62□□□□□ -1.19
TRAV40-201ENST00000390467 SV2AQ7L0J3 742 aa7.62□□□□□ -1.19
TRAV40-201ENST00000390467 WASLO00401 505 aaPredicted RBP7.61□□□□□ -1.19
TRAV40-201ENST00000390467 RAD21O60216 631 aa7.61□□□□□ -1.19
TRAV40-201ENST00000390467 ZNF837Q96EG3 531 aaPredicted RBP7.61□□□□□ -1.19
TRAV40-201ENST00000390467 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
TRAV40-201ENST00000390467 GAS6Q14393 721 aa7.6□□□□□ -1.19
TRAV40-201ENST00000390467 MAP7D1Q3KQU3 841 aa7.6□□□□□ -1.19
TRAV40-201ENST00000390467 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
TRAV40-201ENST00000390467 CLUAP1Q96AJ1 413 aa7.6□□□□□ -1.19
TRAV40-201ENST00000390467 DBN1Q16643 649 aa7.59□□□□□ -1.19
TRAV40-201ENST00000390467 RIPOR1Q6ZS17 1223 aa7.59□□□□□ -1.19
TRAV40-201ENST00000390467 TRIM22Q8IYM9 498 aa7.59□□□□□ -1.19
TRAV40-201ENST00000390467 ZSCAN10Q96SZ4 725 aaPredicted RBP7.59□□□□□ -1.19
TRAV40-201ENST00000390467 GAS2L1Q99501 681 aaPredicted RBP7.59□□□□□ -1.19
TRAV40-201ENST00000390467 GPR25O00155 361 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 THBS1P07996 1170 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 SKIP12755 728 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 PHKA2P46019 1235 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 GDF10P55107 478 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 ESCO1Q5FWF5 840 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 UCN2Q96RP3 112 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 TIMMDC1Q9NPL8 285 aa7.58□□□□□ -1.2
TRAV40-201ENST00000390467 TMEM229AB2RXF0 380 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 INHAP05111 366 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 TLR1Q15399 786 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 C4orf17Q53FE4 359 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms