RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SSFA2P28290 1259 aa20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 AIMP1Q12904 312 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 CENPHQ9H3R5 247 aa20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 WASF1Q92558 559 aa20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 C11orf95C9JLR9 678 aaPredicted RBP20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 JAKMIP3Q5VZ66 844 aa20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 CFTRP13569 1480 aa20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 ALDH1L2Q3SY69 923 aa20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 KIAA1328Q86T90 577 aa20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 ANKRD30BQ9BXX2 1392 aa20.04■□□□□ 0.8
COL4A3BP-203ENST00000380494 ATP2B1P20020 1258 aa20.03■□□□□ 0.8
COL4A3BP-203ENST00000380494 GOLGA6L9A6NEM1 432 aa20.03■□□□□ 0.8
COL4A3BP-203ENST00000380494 TTC39AQ5SRH9 613 aa20.03■□□□□ 0.8
COL4A3BP-203ENST00000380494 DDX19AQ9NUU7 478 aaKnown RBP20.03■□□□□ 0.8
COL4A3BP-203ENST00000380494 CTNNA3Q9UI47 895 aa20.03■□□□□ 0.8
COL4A3BP-203ENST00000380494 CAVIN2O95810 425 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 GTPBP4Q9BZE4 634 aaKnown RBP20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 CCDC69A6NI79 296 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 ZSCAN25Q6NSZ9 544 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 LRRFIP2Q9Y608 721 aaKnown RBP20.02■□□□□ 0.8
COL4A3BP-203ENST00000380494 NEFHP12036 1026 aa20.02■□□□□ 0.79
COL4A3BP-203ENST00000380494 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.79
COL4A3BP-203ENST00000380494 CAMK4Q16566 473 aa20.02■□□□□ 0.79
COL4A3BP-203ENST00000380494 TAF4BQ92750 862 aa20.02■□□□□ 0.79
COL4A3BP-203ENST00000380494 ZNF397Q8NF99 534 aaPredicted RBP20.01■□□□□ 0.79
COL4A3BP-203ENST00000380494 IMMTQ16891 758 aaKnown RBP20.01■□□□□ 0.79
COL4A3BP-203ENST00000380494 USP25Q9UHP3 1055 aa20.01■□□□□ 0.79
COL4A3BP-203ENST00000380494 URI1O94763 535 aaPredicted RBP20.01■□□□□ 0.79
COL4A3BP-203ENST00000380494 RAPGEF4Q8WZA2 1011 aa20.01■□□□□ 0.79
COL4A3BP-203ENST00000380494 TBC1D32Q96NH3 1257 aa20.01■□□□□ 0.79
COL4A3BP-203ENST00000380494 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
COL4A3BP-203ENST00000380494 ADCY5O95622 1261 aa20■□□□□ 0.79
COL4A3BP-203ENST00000380494 ABCC11Q96J66 1382 aa20■□□□□ 0.79
COL4A3BP-203ENST00000380494 KRT222Q8N1A0 295 aa20■□□□□ 0.79
COL4A3BP-203ENST00000380494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20■□□□□ 0.796e-10■■■■■ 49.7
COL4A3BP-203ENST00000380494 ZHX1Q9UKY1 873 aaPredicted RBP20■□□□□ 0.79
COL4A3BP-203ENST00000380494 CCDC171Q6TFL3 1326 aa20■□□□□ 0.79
COL4A3BP-203ENST00000380494 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 RAB11FIP3O75154 756 aa19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 HS1BP3Q53T59 392 aa19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 DYDC1Q8WWB3 177 aa19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 BBXQ8WY36 941 aaPredicted RBP19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 KDM4AO75164 1064 aa19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 LRSAM1Q6UWE0 723 aa19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 GPRASP1Q5JY77 1395 aa19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 KRT18P05783 430 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 TOP1P11387 765 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 CWC27Q6UX04 472 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-203ENST00000380494 BAG4O95429 457 aaKnown RBP19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 GTF2F1P35269 517 aaKnown RBP eCLIP19.98■□□□□ 0.793e-10■■■□□ 15.6
COL4A3BP-203ENST00000380494 NACAP1Q9BZK3 213 aa19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 EVA1CP58658 441 aa19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 ZSCAN23Q3MJ62 389 aa19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 FCHSD2O94868 740 aa19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 TAX1BP1Q86VP1 789 aa19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 C16orf45Q96MC5 204 aaPredicted RBP19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 TANGO6Q9C0B7 1094 aa19.98■□□□□ 0.79
COL4A3BP-203ENST00000380494 MAP4K4O95819 1239 aaPredicted RBP19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 PSME1Q06323 249 aa19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 PLEKHO1Q53GL0 409 aaPredicted RBP19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 EZRP15311 586 aaKnown RBP19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 MX1P20591 662 aa19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 CFAP70Q5T0N1 1121 aa19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 HDGFL1Q5TGJ6 251 aa19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
COL4A3BP-203ENST00000380494 POLR3GO15318 223 aaPredicted RBP19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 CCDC150Q8NCX0 1101 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 AACSQ86V21 672 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 GBP2P32456 591 aaPredicted RBP19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 STX1AQ16623 288 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 FYB1O15117 783 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 KIF4BQ2VIQ3 1234 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 EIF5P55010 431 aaKnown RBP19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 SPA17Q15506 151 aa19.96■□□□□ 0.79
COL4A3BP-203ENST00000380494 ARHGAP5Q13017 1502 aa19.95■□□□□ 0.78
COL4A3BP-203ENST00000380494 IVLP07476 585 aa19.95■□□□□ 0.78
COL4A3BP-203ENST00000380494 SNW1Q13573 536 aaKnown RBP19.95■□□□□ 0.78
COL4A3BP-203ENST00000380494 C20orf194Q5TEA3 1177 aa19.95■□□□□ 0.78
COL4A3BP-203ENST00000380494 TUBB4AP04350 444 aa19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 BMP2KLQ5H9B9 411 aa19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 DAPK1P53355 1430 aa19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 XRCC6P12956 609 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 CCDC94Q9BW85 323 aaPredicted RBP19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 NCOA1Q15788 1441 aa19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
COL4A3BP-203ENST00000380494 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
COL4A3BP-203ENST00000380494 UBE2HP62256 183 aa19.93■□□□□ 0.78
COL4A3BP-203ENST00000380494 MAP2K1Q02750 393 aaPredicted RBP19.93■□□□□ 0.78
COL4A3BP-203ENST00000380494 GOLGA6L10A0A0M3HER8 536 aa19.93■□□□□ 0.78
COL4A3BP-203ENST00000380494 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms