RNA–Protein interactions for RNA: ENST00000379813.7

APTX-203, Transcript of aprataxin, humanhuman

TSL 5 BASIC

Gene APTX, Length 1,121 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-203ENST00000379813 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
APTX-203ENST00000379813 PITPNM1O00562 1244 aa17.08■□□□□ 0.32
APTX-203ENST00000379813 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
APTX-203ENST00000379813 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.32
APTX-203ENST00000379813 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
APTX-203ENST00000379813 NBPF4Q96M43 638 aa17.08■□□□□ 0.32
APTX-203ENST00000379813 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
APTX-203ENST00000379813 INSRP06213 1382 aa17.06■□□□□ 0.32
APTX-203ENST00000379813 FLT4P35916 1363 aa17.06■□□□□ 0.32
APTX-203ENST00000379813 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
APTX-203ENST00000379813 NSD2O96028 1365 aa17.05■□□□□ 0.32
APTX-203ENST00000379813 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
APTX-203ENST00000379813 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
APTX-203ENST00000379813 MEGF6O75095 1541 aa17.04■□□□□ 0.32
APTX-203ENST00000379813 SMG6Q86US8 1419 aaKnown RBP17.03■□□□□ 0.32
APTX-203ENST00000379813 DDB1Q16531 1140 aa17.02■□□□□ 0.32
APTX-203ENST00000379813 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
APTX-203ENST00000379813 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
APTX-203ENST00000379813 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
APTX-203ENST00000379813 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
APTX-203ENST00000379813 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
APTX-203ENST00000379813 IL2RBP14784 551 aa17■□□□□ 0.31
APTX-203ENST00000379813 TNS2Q63HR2 1409 aa17■□□□□ 0.31
APTX-203ENST00000379813 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
APTX-203ENST00000379813 TRIM37O94972 964 aa16.99■□□□□ 0.31
APTX-203ENST00000379813 FXR2P51116 673 aaKnown RBP eCLIP16.99■□□□□ 0.31
APTX-203ENST00000379813 EYA1Q99502 592 aa16.99■□□□□ 0.31
APTX-203ENST00000379813 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
APTX-203ENST00000379813 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
APTX-203ENST00000379813 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
APTX-203ENST00000379813 NPC1L1Q9UHC9 1359 aa16.97■□□□□ 0.31
APTX-203ENST00000379813 EXOC5O00471 708 aa16.96■□□□□ 0.31
APTX-203ENST00000379813 MTHFSP49914 203 aa16.96■□□□□ 0.31
APTX-203ENST00000379813 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
APTX-203ENST00000379813 SBF2Q86WG5 1849 aa16.96■□□□□ 0.3
APTX-203ENST00000379813 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
APTX-203ENST00000379813 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
APTX-203ENST00000379813 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
APTX-203ENST00000379813 RGPD1P0DJD0 1748 aa16.94■□□□□ 0.3
APTX-203ENST00000379813 KCNQ2O43526 872 aa16.94■□□□□ 0.3
APTX-203ENST00000379813 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
APTX-203ENST00000379813 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
APTX-203ENST00000379813 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
APTX-203ENST00000379813 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
APTX-203ENST00000379813 IL13P35225 146 aa16.92■□□□□ 0.3
APTX-203ENST00000379813 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
APTX-203ENST00000379813 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
APTX-203ENST00000379813 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
APTX-203ENST00000379813 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
APTX-203ENST00000379813 CYP27B1O15528 508 aa16.89■□□□□ 0.29
APTX-203ENST00000379813 APBA3O96018 575 aa16.89■□□□□ 0.29
APTX-203ENST00000379813 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
APTX-203ENST00000379813 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
APTX-203ENST00000379813 RAPGEF4Q8WZA2 1011 aa16.89■□□□□ 0.29
APTX-203ENST00000379813 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
APTX-203ENST00000379813 BCL9O00512 1426 aa16.88■□□□□ 0.29
APTX-203ENST00000379813 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
APTX-203ENST00000379813 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
APTX-203ENST00000379813 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
APTX-203ENST00000379813 ANP32CO43423 234 aa16.87■□□□□ 0.29
APTX-203ENST00000379813 MIER1Q8N108 512 aa16.87■□□□□ 0.29
APTX-203ENST00000379813 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
APTX-203ENST00000379813 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
APTX-203ENST00000379813 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
APTX-203ENST00000379813 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
APTX-203ENST00000379813 HMOX1P09601 288 aa16.85■□□□□ 0.29
APTX-203ENST00000379813 BAG6P46379 1132 aa16.85■□□□□ 0.29
APTX-203ENST00000379813 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
APTX-203ENST00000379813 SPDYE1Q8NFV5 336 aaPredicted RBP16.85■□□□□ 0.29
APTX-203ENST00000379813 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
APTX-203ENST00000379813 HAX1O00165 279 aa16.84■□□□□ 0.29
APTX-203ENST00000379813 PROM2Q8N271 834 aa16.84■□□□□ 0.29
APTX-203ENST00000379813 RREB1Q92766 1687 aa16.84■□□□□ 0.29
APTX-203ENST00000379813 BTAF1O14981 1849 aa16.83■□□□□ 0.28
APTX-203ENST00000379813 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.28
APTX-203ENST00000379813 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
APTX-203ENST00000379813 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
APTX-203ENST00000379813 KDRP35968 1356 aa16.82■□□□□ 0.28
APTX-203ENST00000379813 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
APTX-203ENST00000379813 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
APTX-203ENST00000379813 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
APTX-203ENST00000379813 SSUH2Q9Y2M2 353 aa16.81■□□□□ 0.28
APTX-203ENST00000379813 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
APTX-203ENST00000379813 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
APTX-203ENST00000379813 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
APTX-203ENST00000379813 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
APTX-203ENST00000379813 PHKG2P15735 406 aa16.79■□□□□ 0.28
APTX-203ENST00000379813 KCNQ4P56696 695 aa16.79■□□□□ 0.28
APTX-203ENST00000379813 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
APTX-203ENST00000379813 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
APTX-203ENST00000379813 NKX1-1Q15270 411 aaPredicted RBP16.77■□□□□ 0.28
APTX-203ENST00000379813 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
APTX-203ENST00000379813 ITGB4P16144 1822 aa16.76■□□□□ 0.27
APTX-203ENST00000379813 PLSCR1O15162 318 aa16.76■□□□□ 0.27
APTX-203ENST00000379813 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
APTX-203ENST00000379813 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
APTX-203ENST00000379813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■□□□□ 10.8
APTX-203ENST00000379813 RGPD3A6NKT7 1758 aaPredicted RBP16.75■□□□□ 0.27
APTX-203ENST00000379813 RGPD4Q7Z3J3 1758 aa16.75■□□□□ 0.27
APTX-203ENST00000379813 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms