RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
NFX1-202ENST00000379521 PRKAR2BP31323 418 aa8.79□□□□□ -1
NFX1-202ENST00000379521 U2AF1Q01081 240 aaKnown RBP eCLIP8.79□□□□□ -1
NFX1-202ENST00000379521 GNAI1P63096 354 aa8.79□□□□□ -1
NFX1-202ENST00000379521 CASZ1Q86V15 1759 aa8.79□□□□□ -1
NFX1-202ENST00000379521 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
NFX1-202ENST00000379521 COL15A1P39059 1388 aa8.79□□□□□ -1
NFX1-202ENST00000379521 TBC1D32Q96NH3 1257 aa8.79□□□□□ -1
NFX1-202ENST00000379521 DDX19BQ9UMR2 479 aa8.79□□□□□ -1
NFX1-202ENST00000379521 PHLPP1O60346 1717 aa8.78□□□□□ -1
NFX1-202ENST00000379521 USP35Q9P2H5 1018 aa8.78□□□□□ -1
NFX1-202ENST00000379521 ANKRD36CQ5JPF3 1778 aa8.78□□□□□ -1
NFX1-202ENST00000379521 PTPRCP08575 1304 aa8.78□□□□□ -1
NFX1-202ENST00000379521 RBM25P49756 843 aaKnown RBP8.78□□□□□ -1
NFX1-202ENST00000379521 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
NFX1-202ENST00000379521 COG3Q96JB2 828 aa8.78□□□□□ -1
NFX1-202ENST00000379521 CPDO75976 1380 aa8.77□□□□□ -1
NFX1-202ENST00000379521 COL16A1Q07092 1604 aaPredicted RBP8.77□□□□□ -1.01
NFX1-202ENST00000379521 TSR2Q969E8 191 aaKnown RBP8.77□□□□□ -1.01
NFX1-202ENST00000379521 NOB1Q9ULX3 412 aaKnown RBP8.77□□□□□ -1.01
NFX1-202ENST00000379521 LAMB2P55268 1798 aa8.77□□□□□ -1.01
NFX1-202ENST00000379521 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1.01
NFX1-202ENST00000379521 TSPYL6Q8N831 410 aa8.76□□□□□ -1.01
NFX1-202ENST00000379521 KIF2CQ99661 725 aa8.76□□□□□ -1.01
NFX1-202ENST00000379521 RRP7AQ9Y3A4 280 aaKnown RBP8.76□□□□□ -1.01
NFX1-202ENST00000379521 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
NFX1-202ENST00000379521 SKAP1Q86WV1 359 aa8.76□□□□□ -1.01
NFX1-202ENST00000379521 C8orf58Q8NAV2 365 aa8.76□□□□□ -1.01
NFX1-202ENST00000379521 OSBPL3Q9H4L5 887 aa8.76□□□□□ -1.01
NFX1-202ENST00000379521 SEC24BO95487 1268 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 KCNA6P17658 529 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 HOXC9P31274 260 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 TMEM57Q8N5G2 664 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 COG6Q9Y2V7 657 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 KCPQ6ZWJ8 1503 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
NFX1-202ENST00000379521 ITGB4P16144 1822 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 AHDC1Q5TGY3 1603 aaPredicted RBP8.75□□□□□ -1.01
NFX1-202ENST00000379521 FBLN1P23142 703 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 CLEC17AQ6ZS10 378 aa8.75□□□□□ -1.01
NFX1-202ENST00000379521 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
NFX1-202ENST00000379521 HOXB7P09629 217 aa8.74□□□□□ -1.01
NFX1-202ENST00000379521 SPEF2Q9C093 1822 aa8.74□□□□□ -1.01
NFX1-202ENST00000379521 CEBPAP49715 358 aaPredicted RBP8.74□□□□□ -1.01
NFX1-202ENST00000379521 RWDD1Q9H446 243 aaPredicted RBP8.74□□□□□ -1.01
NFX1-202ENST00000379521 DCTPP1Q9H773 170 aa8.74□□□□□ -1.01
NFX1-202ENST00000379521 EID1Q9Y6B2 187 aa8.74□□□□□ -1.01
NFX1-202ENST00000379521 MAP3K5Q99683 1374 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 BMP2KLQ5H9B9 411 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 GCC1Q96CN9 775 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
NFX1-202ENST00000379521 SENP3-EIF4A1A0A087X0R7 540 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 TNS2Q63HR2 1409 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 EYA1Q99502 592 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 LRP5O75197 1615 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 UTYO14607 1347 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 SAFB2Q14151 953 aaKnown RBP eCLIP8.73□□□□□ -1.01
NFX1-202ENST00000379521 AEBP1Q8IUX7 1158 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 IP6K1Q92551 441 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 SNX21Q969T3 373 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 ROBO1Q9Y6N7 1651 aa8.73□□□□□ -1.01
NFX1-202ENST00000379521 HSP90AB2PQ58FF8 381 aa8.72□□□□□ -1.01
NFX1-202ENST00000379521 USP42Q9H9J4 1324 aaKnown RBP8.72□□□□□ -1.01
NFX1-202ENST00000379521 COL5A3P25940 1745 aaPredicted RBP8.72□□□□□ -1.01
NFX1-202ENST00000379521 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
NFX1-202ENST00000379521 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
NFX1-202ENST00000379521 MTHFSDQ2M296 383 aaKnown RBP8.72□□□□□ -1.01
NFX1-202ENST00000379521 DDRGK1Q96HY6 314 aa8.72□□□□□ -1.01
NFX1-202ENST00000379521 COL14A1Q05707 1796 aaKnown RBP8.71□□□□□ -1.02
NFX1-202ENST00000379521 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
NFX1-202ENST00000379521 ANKRD44Q8N8A2 993 aa8.71□□□□□ -1.02
NFX1-202ENST00000379521 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.02
NFX1-202ENST00000379521 MYH15Q9Y2K3 1946 aa8.71□□□□□ -1.02
NFX1-202ENST00000379521 ARHGEF25Q86VW2 580 aa8.71□□□□□ -1.02
NFX1-202ENST00000379521 NWD2Q9ULI1 1742 aa8.7□□□□□ -1.02
NFX1-202ENST00000379521 TNNT2P45379 298 aaPredicted RBP8.7□□□□□ -1.02
NFX1-202ENST00000379521 BCORQ6W2J9 1755 aa8.7□□□□□ -1.02
NFX1-202ENST00000379521 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
NFX1-202ENST00000379521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.7□□□□□ -1.024e-7■■■□□ 17.2
NFX1-202ENST00000379521 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
NFX1-202ENST00000379521 JCADQ9P266 1359 aa8.7□□□□□ -1.02
NFX1-202ENST00000379521 TWISTNBQ3B726 338 aaPredicted RBP8.69□□□□□ -1.02
NFX1-202ENST00000379521 CHMP4BQ9H444 224 aaKnown RBP8.69□□□□□ -1.02
NFX1-202ENST00000379521 IL17REQ8NFR9 667 aa8.69□□□□□ -1.02
NFX1-202ENST00000379521 TNS3Q68CZ2 1445 aa8.69□□□□□ -1.02
NFX1-202ENST00000379521 API5Q9BZZ5 524 aaKnown RBP8.68□□□□□ -1.02
NFX1-202ENST00000379521 SMC4Q9NTJ3 1288 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 STAG3Q9UJ98 1225 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 AOX1Q06278 1338 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 KIAA1551Q9HCM1 1747 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 MTX1Q13505 466 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 POLA2Q14181 598 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 CHD1LQ86WJ1 897 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 ANKLE2Q86XL3 938 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 STAP2Q9UGK3 403 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
NFX1-202ENST00000379521 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
NFX1-202ENST00000379521 ANP32AP39687 249 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms