RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
PRPF18-202ENST00000378572 FYB1O15117 783 aa18.99■□□□□ 0.63
PRPF18-202ENST00000378572 PTGER2P43116 358 aa18.99■□□□□ 0.63
PRPF18-202ENST00000378572 ZCRB1Q8TBF4 217 aaKnown RBP18.99■□□□□ 0.63
PRPF18-202ENST00000378572 ZNF827Q17R98 1081 aa18.98■□□□□ 0.63
PRPF18-202ENST00000378572 RAPGEF4Q8WZA2 1011 aa18.98■□□□□ 0.63
PRPF18-202ENST00000378572 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
PRPF18-202ENST00000378572 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
PRPF18-202ENST00000378572 FHDC1Q9C0D6 1143 aaPredicted RBP18.97■□□□□ 0.63
PRPF18-202ENST00000378572 LRRC4BQ9NT99 713 aa18.96■□□□□ 0.63
PRPF18-202ENST00000378572 NSD3Q9BZ95 1437 aa18.95■□□□□ 0.62
PRPF18-202ENST00000378572 SHANK3Q9BYB0 1731 aa18.95■□□□□ 0.62
PRPF18-202ENST00000378572 SLC27A3Q5K4L6 730 aa18.95■□□□□ 0.62
PRPF18-202ENST00000378572 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
PRPF18-202ENST00000378572 KLHL34Q8N239 644 aa18.95■□□□□ 0.62
PRPF18-202ENST00000378572 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
PRPF18-202ENST00000378572 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
PRPF18-202ENST00000378572 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
PRPF18-202ENST00000378572 FLT4P35916 1363 aa18.94■□□□□ 0.62
PRPF18-202ENST00000378572 KCNQ4P56696 695 aa18.94■□□□□ 0.62
PRPF18-202ENST00000378572 ARXQ96QS3 562 aa18.94■□□□□ 0.62
PRPF18-202ENST00000378572 TFCP2L1Q9NZI6 479 aa18.94■□□□□ 0.62
PRPF18-202ENST00000378572 PPM1GO15355 546 aaPredicted RBP18.93■□□□□ 0.62
PRPF18-202ENST00000378572 HSP90AB2PQ58FF8 381 aa18.93■□□□□ 0.62
PRPF18-202ENST00000378572 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
PRPF18-202ENST00000378572 INSRP06213 1382 aa18.92■□□□□ 0.62
PRPF18-202ENST00000378572 SYT17Q9BSW7 474 aa18.91■□□□□ 0.62
PRPF18-202ENST00000378572 CCNL1Q9UK58 526 aaPredicted RBP18.91■□□□□ 0.62
PRPF18-202ENST00000378572 MSH5O43196 834 aa18.91■□□□□ 0.62
PRPF18-202ENST00000378572 POLD1P28340 1107 aa18.91■□□□□ 0.62
PRPF18-202ENST00000378572 AKT1S1Q96B36 256 aa18.9■□□□□ 0.62
PRPF18-202ENST00000378572 PCDH11XQ9BZA7 1347 aa18.9■□□□□ 0.62
PRPF18-202ENST00000378572 PCDH11YQ9BZA8 1340 aa18.9■□□□□ 0.62
PRPF18-202ENST00000378572 NSD2O96028 1365 aa18.9■□□□□ 0.62
PRPF18-202ENST00000378572 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
PRPF18-202ENST00000378572 EMILIN1Q9Y6C2 1016 aa18.89■□□□□ 0.61
PRPF18-202ENST00000378572 LY75O60449 1722 aa18.89■□□□□ 0.61
PRPF18-202ENST00000378572 SGIP1Q9BQI5 828 aa18.88■□□□□ 0.61
PRPF18-202ENST00000378572 CARD14Q9BXL6 1004 aa18.88■□□□□ 0.61
PRPF18-202ENST00000378572 PNPLA7Q6ZV29 1317 aa18.88■□□□□ 0.61
PRPF18-202ENST00000378572 KIF24Q5T7B8 1368 aa18.88■□□□□ 0.61
PRPF18-202ENST00000378572 QSER1Q2KHR3 1735 aa18.88■□□□□ 0.61
PRPF18-202ENST00000378572 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
PRPF18-202ENST00000378572 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
PRPF18-202ENST00000378572 SLC16A10Q8TF71 515 aa18.86■□□□□ 0.61
PRPF18-202ENST00000378572 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
PRPF18-202ENST00000378572 MPRIPQ6WCQ1 1025 aa18.85■□□□□ 0.61
PRPF18-202ENST00000378572 GPR162Q16538 588 aa18.83■□□□□ 0.61
PRPF18-202ENST00000378572 TNNT2P45379 298 aaPredicted RBP18.83■□□□□ 0.6
PRPF18-202ENST00000378572 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
PRPF18-202ENST00000378572 C5P01031 1676 aa18.81■□□□□ 0.6
PRPF18-202ENST00000378572 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
PRPF18-202ENST00000378572 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
PRPF18-202ENST00000378572 PKD1L3Q7Z443 1732 aa18.8■□□□□ 0.6
PRPF18-202ENST00000378572 ANKRD26Q9UPS8 1709 aa18.8■□□□□ 0.6
PRPF18-202ENST00000378572 CYP27B1O15528 508 aa18.8■□□□□ 0.6
PRPF18-202ENST00000378572 MSL1Q68DK7 614 aa18.8■□□□□ 0.6
PRPF18-202ENST00000378572 TOGARAM1Q9Y4F4 1720 aa18.79■□□□□ 0.6
PRPF18-202ENST00000378572 MAP2P11137 1827 aaKnown RBP18.79■□□□□ 0.6
PRPF18-202ENST00000378572 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
PRPF18-202ENST00000378572 COL23A1Q86Y22 540 aaPredicted RBP18.77■□□□□ 0.6
PRPF18-202ENST00000378572 SMARCC1Q92922 1105 aaPredicted RBP18.77■□□□□ 0.6
PRPF18-202ENST00000378572 AK7Q96M32 723 aa18.77■□□□□ 0.6
PRPF18-202ENST00000378572 ITGB4P16144 1822 aa18.77■□□□□ 0.6
PRPF18-202ENST00000378572 HMGB2P26583 209 aaKnown RBP18.77■□□□□ 0.59
PRPF18-202ENST00000378572 CHD4Q14839 1912 aa18.76■□□□□ 0.59
PRPF18-202ENST00000378572 EYA1Q99502 592 aa18.76■□□□□ 0.59
PRPF18-202ENST00000378572 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
PRPF18-202ENST00000378572 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
PRPF18-202ENST00000378572 PHF14O94880 888 aa18.74■□□□□ 0.59
PRPF18-202ENST00000378572 NLGN2Q8NFZ4 835 aa18.74■□□□□ 0.59
PRPF18-202ENST00000378572 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
PRPF18-202ENST00000378572 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
PRPF18-202ENST00000378572 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
PRPF18-202ENST00000378572 TAF1LQ8IZX4 1826 aa18.73■□□□□ 0.59
PRPF18-202ENST00000378572 C4BP0C0L5 1744 aa18.73■□□□□ 0.59
PRPF18-202ENST00000378572 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
PRPF18-202ENST00000378572 PIGBQ92521 554 aa18.73■□□□□ 0.59
PRPF18-202ENST00000378572 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
PRPF18-202ENST00000378572 UTRNP46939 3433 aa18.72■□□□□ 0.59
PRPF18-202ENST00000378572 IFNL2Q8IZJ0 200 aa18.71■□□□□ 0.59
PRPF18-202ENST00000378572 PANK3Q9H999 370 aa18.71■□□□□ 0.59
PRPF18-202ENST00000378572 PHKG2P15735 406 aa18.69■□□□□ 0.58
PRPF18-202ENST00000378572 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
PRPF18-202ENST00000378572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.582e-6■■■■□ 23.1
PRPF18-202ENST00000378572 LOC102724428A0A0B4J2F2 783 aa18.69■□□□□ 0.58
PRPF18-202ENST00000378572 SIK1P57059 783 aa18.69■□□□□ 0.58
PRPF18-202ENST00000378572 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
PRPF18-202ENST00000378572 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
PRPF18-202ENST00000378572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.67■□□□□ 0.58
PRPF18-202ENST00000378572 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
PRPF18-202ENST00000378572 ASAP1Q9ULH1 1129 aa18.67■□□□□ 0.58
PRPF18-202ENST00000378572 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
PRPF18-202ENST00000378572 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
PRPF18-202ENST00000378572 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
PRPF18-202ENST00000378572 GNPATO15228 680 aa18.66■□□□□ 0.58
PRPF18-202ENST00000378572 UBR3Q6ZT12 1888 aa18.65■□□□□ 0.58
PRPF18-202ENST00000378572 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
PRPF18-202ENST00000378572 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
PRPF18-202ENST00000378572 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms