RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 MX1P20591 662 aa22.27■■□□□ 1.16
CNTNAP3B-203ENST00000377561 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
CNTNAP3B-203ENST00000377561 CWC27Q6UX04 472 aaKnown RBP22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 CNNM1Q9NRU3 951 aa22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 RAB11FIP3O75154 756 aa22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 KIF1BPQ96EK5 621 aa22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
CNTNAP3B-203ENST00000377561 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
CNTNAP3B-203ENST00000377561 ZNF771Q7L3S4 317 aaPredicted RBP22.25■■□□□ 1.15
CNTNAP3B-203ENST00000377561 FYB1O15117 783 aa22.25■■□□□ 1.15
CNTNAP3B-203ENST00000377561 KRT85P78386 507 aa22.25■■□□□ 1.15
CNTNAP3B-203ENST00000377561 LARP1BQ659C4 914 aaKnown RBP22.24■■□□□ 1.15
CNTNAP3B-203ENST00000377561 NUTM1Q86Y26 1132 aa22.24■■□□□ 1.15
CNTNAP3B-203ENST00000377561 JAKMIP1Q96N16 626 aaKnown RBP22.24■■□□□ 1.15
CNTNAP3B-203ENST00000377561 SMARCA5O60264 1052 aaPredicted RBP22.23■■□□□ 1.15
CNTNAP3B-203ENST00000377561 STK3Q13188 491 aa22.23■■□□□ 1.15
CNTNAP3B-203ENST00000377561 PKNOX2Q96KN3 472 aa22.23■■□□□ 1.15
CNTNAP3B-203ENST00000377561 PTPRCP08575 1304 aa22.23■■□□□ 1.15
CNTNAP3B-203ENST00000377561 STK38Q15208 465 aa22.23■■□□□ 1.15
CNTNAP3B-203ENST00000377561 CCDC192P0DO97 292 aa22.23■■□□□ 1.15
CNTNAP3B-203ENST00000377561 SAMD1Q6SPF0 538 aaPredicted RBP22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 FAM177BA6PVY3 158 aa22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 IGHDP01880 384 aa22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 DDX54Q8TDD1 881 aaKnown RBP22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 CCDC57Q2TAC2 916 aa22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 TTC21BQ7Z4L5 1316 aa22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 EIF2AK4Q9P2K8 1649 aaKnown RBP22.22■■□□□ 1.15
CNTNAP3B-203ENST00000377561 KRT32Q14532 448 aa22.21■■□□□ 1.15
CNTNAP3B-203ENST00000377561 GLRX3O76003 335 aaKnown RBP22.21■■□□□ 1.15
CNTNAP3B-203ENST00000377561 PDIA4P13667 645 aaKnown RBP22.21■■□□□ 1.15
CNTNAP3B-203ENST00000377561 ARHGEF12Q9NZN5 1544 aa22.21■■□□□ 1.15
CNTNAP3B-203ENST00000377561 XPCQ01831 940 aaPredicted RBP22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 CNKSR2Q8WXI2 1034 aa22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 TBC1D2Q9BYX2 928 aa22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 AMOTL2Q9Y2J4 779 aa22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 CEBPZQ03701 1054 aaKnown RBP22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 PRDM11Q9NQV5 511 aa22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 AMOTQ4VCS5 1084 aa22.2■■□□□ 1.14
CNTNAP3B-203ENST00000377561 TESK2Q96S53 571 aa22.19■■□□□ 1.14
CNTNAP3B-203ENST00000377561 JMYQ8N9B5 988 aa22.19■■□□□ 1.14
CNTNAP3B-203ENST00000377561 CEP126Q9P2H0 1117 aa22.19■■□□□ 1.14
CNTNAP3B-203ENST00000377561 NAP1L1P55209 391 aaKnown RBP22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 MNS1Q8NEH6 495 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 F6X3S4 739 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 ZC3H6P61129 1189 aaKnown RBP22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 TNMDQ9H2S6 317 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 MBIPQ9NS73 344 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 KDM4AO75164 1064 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
CNTNAP3B-203ENST00000377561 CT47A1Q5JQC4 288 aaPredicted RBP22.17■■□□□ 1.14
CNTNAP3B-203ENST00000377561 GNL3LQ9NVN8 582 aaKnown RBP22.17■■□□□ 1.14
CNTNAP3B-203ENST00000377561 PATL2C9JE40 543 aaKnown RBP22.17■■□□□ 1.14
CNTNAP3B-203ENST00000377561 RRP12Q5JTH9 1297 aaKnown RBP22.17■■□□□ 1.14
CNTNAP3B-203ENST00000377561 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 MTERF4Q7Z6M4 381 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 CTNNA3Q9UI47 895 aa22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 PHF8Q9UPP1 1060 aa22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 SLC3A2P08195 630 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 CASTP20810 708 aaKnown RBP22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 NACAP1Q9BZK3 213 aa22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 ARGLU1Q9NWB6 273 aaPredicted RBP22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 A2MP01023 1474 aa22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 TEX35Q5T0J7 233 aa22.16■■□□□ 1.14
CNTNAP3B-203ENST00000377561 HDAC1Q13547 482 aaPredicted RBP22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 SMC2O95347 1197 aa22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 ATP2B1P20020 1258 aa22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 FKBP4Q02790 459 aaKnown RBP eCLIP22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 ARHGAP45Q92619 1136 aa22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 MAP7D2Q96T17 732 aa22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 PDILTQ8N807 584 aa22.15■■□□□ 1.14
CNTNAP3B-203ENST00000377561 DNMT1P26358 1616 aaKnown RBP22.14■■□□□ 1.14
CNTNAP3B-203ENST00000377561 ME1P48163 572 aa22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 HMGN5P82970 282 aaKnown RBP22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 FLIIQ13045 1269 aa22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 USHBP1Q8N6Y0 703 aa22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 DNAAF4Q8WXU2 420 aa22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 SPATA32Q96LK8 384 aa22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 LRRFIP2Q9Y608 721 aaKnown RBP22.14■■□□□ 1.13
CNTNAP3B-203ENST00000377561 FMNL2Q96PY5 1086 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 ODF2Q5BJF6 829 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 TBC1D32Q96NH3 1257 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 CFAP45Q9UL16 551 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 RUFY1Q96T51 708 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 PZPP20742 1482 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 TRIM22Q8IYM9 498 aa22.13■■□□□ 1.13
CNTNAP3B-203ENST00000377561 OFD1O75665 1012 aa22.12■■□□□ 1.13
CNTNAP3B-203ENST00000377561 CDR1P51861 262 aa22.12■■□□□ 1.13
CNTNAP3B-203ENST00000377561 PUS7Q96PZ0 661 aaKnown RBP22.12■■□□□ 1.13
CNTNAP3B-203ENST00000377561 UPF3BQ9BZI7 483 aaKnown RBP22.12■■□□□ 1.13
CNTNAP3B-203ENST00000377561 TBC1D9Q6ZT07 1266 aa22.12■■□□□ 1.13
CNTNAP3B-203ENST00000377561 SPC24Q8NBT2 197 aa22.12■■□□□ 1.13
CNTNAP3B-203ENST00000377561 PIK3C2GO75747 1445 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms