RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 PXDNQ92626 1479 aa16.2■□□□□ 0.18
CLCN6-206ENST00000376496 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
CLCN6-206ENST00000376496 RGPD5Q99666 1765 aa16.2■□□□□ 0.18
CLCN6-206ENST00000376496 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
CLCN6-206ENST00000376496 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
CLCN6-206ENST00000376496 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
CLCN6-206ENST00000376496 TRIM27P14373 513 aa16.18■□□□□ 0.18
CLCN6-206ENST00000376496 GAS2L2Q8NHY3 880 aa16.18■□□□□ 0.18
CLCN6-206ENST00000376496 TNS3Q68CZ2 1445 aa16.18■□□□□ 0.18
CLCN6-206ENST00000376496 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
CLCN6-206ENST00000376496 CRB1P82279 1406 aa16.17■□□□□ 0.18
CLCN6-206ENST00000376496 CHL1O00533 1208 aa16.17■□□□□ 0.18
CLCN6-206ENST00000376496 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
CLCN6-206ENST00000376496 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
CLCN6-206ENST00000376496 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
CLCN6-206ENST00000376496 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
CLCN6-206ENST00000376496 TSPYL4Q9UJ04 414 aa16.15■□□□□ 0.18
CLCN6-206ENST00000376496 ATF7IPQ6VMQ6 1270 aa16.15■□□□□ 0.18
CLCN6-206ENST00000376496 NLRP2Q9NX02 1062 aa16.15■□□□□ 0.18
CLCN6-206ENST00000376496 KIAA0232Q92628 1395 aa16.14■□□□□ 0.17
CLCN6-206ENST00000376496 IGHDP01880 384 aa16.14■□□□□ 0.17
CLCN6-206ENST00000376496 LGR6Q9HBX8 967 aa16.14■□□□□ 0.17
CLCN6-206ENST00000376496 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
CLCN6-206ENST00000376496 ERBB3P21860 1342 aa16.14■□□□□ 0.17
CLCN6-206ENST00000376496 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
CLCN6-206ENST00000376496 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
CLCN6-206ENST00000376496 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
CLCN6-206ENST00000376496 CSB-PGBD3P0DP91 1061 aa16.13■□□□□ 0.17
CLCN6-206ENST00000376496 TMEM57Q8N5G2 664 aa16.13■□□□□ 0.17
CLCN6-206ENST00000376496 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
CLCN6-206ENST00000376496 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
CLCN6-206ENST00000376496 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
CLCN6-206ENST00000376496 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
CLCN6-206ENST00000376496 MPRIPQ6WCQ1 1025 aa16.12■□□□□ 0.17
CLCN6-206ENST00000376496 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
CLCN6-206ENST00000376496 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
CLCN6-206ENST00000376496 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
CLCN6-206ENST00000376496 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
CLCN6-206ENST00000376496 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
CLCN6-206ENST00000376496 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
CLCN6-206ENST00000376496 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.17
CLCN6-206ENST00000376496 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
CLCN6-206ENST00000376496 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.16
CLCN6-206ENST00000376496 CENPQQ7L2Z9 268 aaPredicted RBP16.08■□□□□ 0.16
CLCN6-206ENST00000376496 COL18A1P39060 1754 aa16.08■□□□□ 0.16
CLCN6-206ENST00000376496 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
CLCN6-206ENST00000376496 KCNQ3O43525 872 aa16.07■□□□□ 0.16
CLCN6-206ENST00000376496 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
CLCN6-206ENST00000376496 ZNF428Q96B54 188 aa16.06■□□□□ 0.16
CLCN6-206ENST00000376496 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
CLCN6-206ENST00000376496 RGS3P49796 1198 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 G2E3Q7L622 706 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 RAPGEF4Q8WZA2 1011 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 LRRC37A3O60309 1634 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 AKAP4Q5JQC9 854 aa16.05■□□□□ 0.16
CLCN6-206ENST00000376496 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
CLCN6-206ENST00000376496 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
CLCN6-206ENST00000376496 MS4A1P11836 297 aa16.04■□□□□ 0.16
CLCN6-206ENST00000376496 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
CLCN6-206ENST00000376496 MEGF6O75095 1541 aa16.04■□□□□ 0.16
CLCN6-206ENST00000376496 BRPF1P55201 1214 aaPredicted RBP16.03■□□□□ 0.16
CLCN6-206ENST00000376496 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
CLCN6-206ENST00000376496 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
CLCN6-206ENST00000376496 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
CLCN6-206ENST00000376496 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
CLCN6-206ENST00000376496 TEFQ10587 303 aa16.02■□□□□ 0.16
CLCN6-206ENST00000376496 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
CLCN6-206ENST00000376496 CPDO75976 1380 aa16.02■□□□□ 0.15
CLCN6-206ENST00000376496 TATP17735 454 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-206ENST00000376496 TOM1L2Q6ZVM7 507 aa16.01■□□□□ 0.15
CLCN6-206ENST00000376496 F6X3S4 739 aa16.01■□□□□ 0.15
CLCN6-206ENST00000376496 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
CLCN6-206ENST00000376496 FAM208AQ9UK61 1670 aaKnown RBP16.01■□□□□ 0.15
CLCN6-206ENST00000376496 LMO7Q8WWI1 1683 aa16■□□□□ 0.15
CLCN6-206ENST00000376496 NHSL1Q5SYE7 1610 aa16■□□□□ 0.15
CLCN6-206ENST00000376496 BTBD11A6QL63 1104 aa16■□□□□ 0.15
CLCN6-206ENST00000376496 ZBTB40Q9NUA8 1239 aa16■□□□□ 0.15
CLCN6-206ENST00000376496 ABCC4O15439 1325 aa16■□□□□ 0.15
CLCN6-206ENST00000376496 EIF2S2P20042 333 aaKnown RBP16■□□□□ 0.15
CLCN6-206ENST00000376496 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
CLCN6-206ENST00000376496 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
CLCN6-206ENST00000376496 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
CLCN6-206ENST00000376496 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
CLCN6-206ENST00000376496 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
CLCN6-206ENST00000376496 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
CLCN6-206ENST00000376496 API5Q9BZZ5 524 aaKnown RBP15.98■□□□□ 0.15
CLCN6-206ENST00000376496 RGS12O14924 1447 aa15.98■□□□□ 0.15
CLCN6-206ENST00000376496 ABCA3Q99758 1704 aa15.98■□□□□ 0.15
CLCN6-206ENST00000376496 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
CLCN6-206ENST00000376496 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
CLCN6-206ENST00000376496 ANXA1P04083 346 aa15.98■□□□□ 0.15
CLCN6-206ENST00000376496 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
CLCN6-206ENST00000376496 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
CLCN6-206ENST00000376496 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
CLCN6-206ENST00000376496 CYP27B1O15528 508 aa15.97■□□□□ 0.15
CLCN6-206ENST00000376496 PHKG2P15735 406 aa15.97■□□□□ 0.15
CLCN6-206ENST00000376496 WDR17Q8IZU2 1322 aa15.96■□□□□ 0.15
CLCN6-206ENST00000376496 EVA1CP58658 441 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms