RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SMC3Q9UQE7 1217 aa17.44■□□□□ 0.38
TNFRSF1B-201ENST00000376259 MX1P20591 662 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 PHF23Q9BUL5 403 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 CPA1P15085 419 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ZSCAN30Q86W11 494 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 IL13P35225 146 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 STK3Q13188 491 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 TMX3Q96JJ7 454 aa17.43■□□□□ 0.38
TNFRSF1B-201ENST00000376259 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
TNFRSF1B-201ENST00000376259 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
TNFRSF1B-201ENST00000376259 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1B-201ENST00000376259 PDE1AP54750 535 aa17.42■□□□□ 0.38
TNFRSF1B-201ENST00000376259 KLHL40Q2TBA0 621 aa17.42■□□□□ 0.38
TNFRSF1B-201ENST00000376259 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ACEP12821 1306 aa17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 TRPM2O94759 1503 aa17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 CCDC30Q5VVM6 783 aa17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 GNAI3P08754 354 aa17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 IFIT2P09913 472 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 FLIIQ13045 1269 aa17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 RBSNQ9H1K0 784 aa17.41■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
TNFRSF1B-201ENST00000376259 IQGAP3Q86VI3 1631 aa17.4■□□□□ 0.38
TNFRSF1B-201ENST00000376259 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1B-201ENST00000376259 JARID2Q92833 1246 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 MSH6P52701 1360 aa17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 ABCC1P33527 1531 aa17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 MADDQ8WXG6 1647 aa17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1B-201ENST00000376259 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
TNFRSF1B-201ENST00000376259 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1B-201ENST00000376259 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
TNFRSF1B-201ENST00000376259 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
TNFRSF1B-201ENST00000376259 KDM4AO75164 1064 aa17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CCDC83Q8IWF9 413 aa17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 UQCRHLA0A096LP55 91 aa17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PNMA6EA0A0J9YXQ4 647 aa17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 UQCRHP07919 91 aa17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CSB-PGBD3P0DP91 1061 aa17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-201ENST00000376259 E9PCH4 1651 aa17.36■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CAMK4Q16566 473 aa17.36■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
TNFRSF1B-201ENST00000376259 UNC13BO14795 1591 aa17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 ZNF592Q92610 1267 aa17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CASTP20810 708 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
TNFRSF1B-201ENST00000376259 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 KIF2CQ99661 725 aa17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PHF14O94880 888 aa17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1B-201ENST00000376259 MBD3O95983 291 aa17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 MYL6BP14649 208 aa17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 PSME1Q06323 249 aa17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 ZRSR1Q15695 479 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 C17orf53Q8N3J3 647 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1B-201ENST00000376259 NECAB1Q8N987 351 aa17.33■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ISY1Q9ULR0 285 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-201ENST00000376259 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CHAF1AQ13111 956 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1B-201ENST00000376259 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 PI4KAP2A4QPH2 592 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CNTROBQ8N137 903 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 PI4KAP1Q8N8J0 262 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ESYT1Q9BSJ8 1104 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CNPY2Q9Y2B0 182 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 LMBRD1Q9NUN5 540 aa17.32■□□□□ 0.36
TNFRSF1B-201ENST00000376259 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 TSC1Q92574 1164 aa17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 GPATCH3Q96I76 525 aa17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms