RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 SNX21Q969T3 373 aa14.4□□□□□ -0.1
MCF2L-202ENST00000375597 TCEANC2Q96MN5 208 aa14.4□□□□□ -0.1
MCF2L-202ENST00000375597 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
MCF2L-202ENST00000375597 TMEM63CQ9P1W3 806 aa14.4□□□□□ -0.1
MCF2L-202ENST00000375597 MSH6P52701 1360 aa14.39□□□□□ -0.11
MCF2L-202ENST00000375597 CEP85Q6P2H3 762 aa14.39□□□□□ -0.11
MCF2L-202ENST00000375597 GPT2Q8TD30 523 aa14.39□□□□□ -0.11
MCF2L-202ENST00000375597 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
MCF2L-202ENST00000375597 MYO3AQ8NEV4 1616 aa14.39□□□□□ -0.11
MCF2L-202ENST00000375597 ZSCAN30Q86W11 494 aa14.39□□□□□ -0.11
MCF2L-202ENST00000375597 UQCRHLA0A096LP55 91 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 GADD45BO75293 160 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-202ENST00000375597 UQCRHP07919 91 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 CCDC173Q0VFZ6 552 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 NGDNQ8NEJ9 315 aaKnown RBP14.38□□□□□ -0.11
MCF2L-202ENST00000375597 SPG7Q9UQ90 795 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 MROH1Q8NDA8 1641 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 FERMT3Q86UX7 667 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 NAP1L2Q9ULW6 460 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-202ENST00000375597 ERC2O15083 957 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 REC8O95072 547 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 NUCB2P80303 420 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 IFT57Q9NWB7 429 aa14.38□□□□□ -0.11
MCF2L-202ENST00000375597 VPS37CA5D8V6 355 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-202ENST00000375597 SURF6O75683 361 aaKnown RBP14.37□□□□□ -0.11
MCF2L-202ENST00000375597 KLHL40Q2TBA0 621 aa14.37□□□□□ -0.11
MCF2L-202ENST00000375597 CHMP4BQ9H444 224 aaKnown RBP14.37□□□□□ -0.11
MCF2L-202ENST00000375597 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
MCF2L-202ENST00000375597 UNC5CLQ8IV45 518 aa14.37□□□□□ -0.11
MCF2L-202ENST00000375597 LMBRD1Q9NUN5 540 aa14.37□□□□□ -0.11
MCF2L-202ENST00000375597 LRRFIP2Q9Y608 721 aaKnown RBP14.37□□□□□ -0.11
MCF2L-202ENST00000375597 FAM69CQ0P6D2 419 aa14.37□□□□□ -0.11
MCF2L-202ENST00000375597 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
MCF2L-202ENST00000375597 CIZ1Q9ULV3 898 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-202ENST00000375597 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
MCF2L-202ENST00000375597 IL13P35225 146 aa14.36□□□□□ -0.11
MCF2L-202ENST00000375597 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
MCF2L-202ENST00000375597 HMMRO75330 724 aa14.35□□□□□ -0.11
MCF2L-202ENST00000375597 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
MCF2L-202ENST00000375597 TTC12Q9H892 705 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-202ENST00000375597 EFCAB6Q5THR3 1501 aa14.35□□□□□ -0.11
MCF2L-202ENST00000375597 IQSEC2Q5JU85 1478 aa14.35□□□□□ -0.11
MCF2L-202ENST00000375597 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
MCF2L-202ENST00000375597 MROH2AA6NES4 1674 aa14.35□□□□□ -0.11
MCF2L-202ENST00000375597 PDE1AP54750 535 aa14.34□□□□□ -0.11
MCF2L-202ENST00000375597 IGSF3O75054 1194 aa14.34□□□□□ -0.11
MCF2L-202ENST00000375597 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
MCF2L-202ENST00000375597 NRXN1Q9ULB1 1477 aa14.34□□□□□ -0.11
MCF2L-202ENST00000375597 SBNO2Q9Y2G9 1366 aa14.33□□□□□ -0.12
MCF2L-202ENST00000375597 MCCP23508 829 aa14.33□□□□□ -0.12
MCF2L-202ENST00000375597 AIMP1Q12904 312 aaKnown RBP14.33□□□□□ -0.12
MCF2L-202ENST00000375597 ANKRD44Q8N8A2 993 aa14.33□□□□□ -0.12
MCF2L-202ENST00000375597 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-202ENST00000375597 CEBPAP49715 358 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-202ENST00000375597 STK3Q13188 491 aa14.33□□□□□ -0.12
MCF2L-202ENST00000375597 CAMK4Q16566 473 aa14.33□□□□□ -0.12
MCF2L-202ENST00000375597 ZDHHC9Q9Y397 364 aa14.33□□□□□ -0.12
MCF2L-202ENST00000375597 VIRMAQ69YN4 1812 aaKnown RBP14.32□□□□□ -0.12
MCF2L-202ENST00000375597 CNPY2Q9Y2B0 182 aa14.32□□□□□ -0.12
MCF2L-202ENST00000375597 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-202ENST00000375597 SIL1Q9H173 461 aa14.32□□□□□ -0.12
MCF2L-202ENST00000375597 SETBP1Q9Y6X0 1596 aa14.32□□□□□ -0.12
MCF2L-202ENST00000375597 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
MCF2L-202ENST00000375597 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
MCF2L-202ENST00000375597 PPRC1Q5VV67 1664 aaKnown RBP14.32□□□□□ -0.12
MCF2L-202ENST00000375597 IL16Q14005 1332 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
MCF2L-202ENST00000375597 ZC3H13Q5T200 1668 aaKnown RBP14.31□□□□□ -0.12
MCF2L-202ENST00000375597 MX1P20591 662 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 IL25Q9H293 177 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
MCF2L-202ENST00000375597 YTHDC2Q9H6S0 1430 aaKnown RBP14.31□□□□□ -0.12
MCF2L-202ENST00000375597 LMTK2Q8IWU2 1503 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 GNAI2P04899 355 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 DRC7Q8IY82 874 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 NECAB1Q8N987 351 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
MCF2L-202ENST00000375597 RRP9O43818 475 aaKnown RBP14.3□□□□□ -0.12
MCF2L-202ENST00000375597 NLRP6P59044 892 aa14.3□□□□□ -0.12
MCF2L-202ENST00000375597 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
MCF2L-202ENST00000375597 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-202ENST00000375597 KDM4AO75164 1064 aa14.3□□□□□ -0.12
MCF2L-202ENST00000375597 CCDC83Q8IWF9 413 aa14.3□□□□□ -0.12
MCF2L-202ENST00000375597 ABCC4O15439 1325 aa14.3□□□□□ -0.12
MCF2L-202ENST00000375597 ADGRB3O60242 1522 aa14.3□□□□□ -0.12
MCF2L-202ENST00000375597 DDIT3P35638 169 aa14.29□□□□□ -0.12
MCF2L-202ENST00000375597 SRGAP3O43295 1099 aa14.29□□□□□ -0.12
MCF2L-202ENST00000375597 SHPRHQ149N8 1683 aa14.29□□□□□ -0.12
MCF2L-202ENST00000375597 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-202ENST00000375597 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-202ENST00000375597 USP48Q86UV5 1035 aa14.29□□□□□ -0.12
MCF2L-202ENST00000375597 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
MCF2L-202ENST00000375597 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
MCF2L-202ENST00000375597 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-202ENST00000375597 YEATS2Q9ULM3 1422 aa14.28□□□□□ -0.12
MCF2L-202ENST00000375597 NSD2O96028 1365 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms