RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 LARP1Q6PKG0 1096 aaKnown RBP6.28□□□□□ -1.4
A1CF-205ENST00000374001 KIF1BPQ96EK5 621 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 RBM33Q96EV2 1170 aaKnown RBP6.28□□□□□ -1.4
A1CF-205ENST00000374001 ZNF287Q9HBT7 754 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 HMGB1P09429 215 aaKnown RBP6.28□□□□□ -1.4
A1CF-205ENST00000374001 TAF7Q15545 349 aaPredicted RBP6.28□□□□□ -1.4
A1CF-205ENST00000374001 TPRNQ4KMQ1 711 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 AKAP2Q9Y2D5 859 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 KDM5CP41229 1560 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 ZMYM3Q14202 1370 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 ATP10AO60312 1499 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 GLRX3O76003 335 aaKnown RBP6.28□□□□□ -1.4
A1CF-205ENST00000374001 BICD2Q8TD16 824 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 FSD1Q9BTV5 496 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 STARD3NLO95772 234 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 TCEAL9Q9UHQ7 104 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 UNC13BO14795 1591 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 NASPP49321 788 aaPredicted RBP6.28□□□□□ -1.4
A1CF-205ENST00000374001 NFXL1Q6ZNB6 911 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 ZNF652Q9Y2D9 606 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 WASF1Q92558 559 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 PTPRKQ15262 1439 aa6.28□□□□□ -1.4
A1CF-205ENST00000374001 IDI1Q13907 227 aa6.27□□□□□ -1.4
A1CF-205ENST00000374001 SH2B1Q9NRF2 756 aaPredicted RBP6.27□□□□□ -1.4
A1CF-205ENST00000374001 BABAM1Q9NWV8 329 aa6.27□□□□□ -1.4
A1CF-205ENST00000374001 K7ELQ4 463 aaPredicted RBP6.27□□□□□ -1.41
A1CF-205ENST00000374001 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
A1CF-205ENST00000374001 TRIM22Q8IYM9 498 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 ACBD3Q9H3P7 528 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 BTBD11A6QL63 1104 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 DACH1Q9UI36 760 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 ARGLU1Q9NWB6 273 aaPredicted RBP6.27□□□□□ -1.41
A1CF-205ENST00000374001 TRAPPC8Q9Y2L5 1435 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 CABP4P57796 275 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 LUC7LQ9NQ29 371 aaKnown RBP6.27□□□□□ -1.41
A1CF-205ENST00000374001 NFKBIBQ15653 356 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 CCDC57Q2TAC2 916 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 CADPS2Q86UW7 1296 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 RIMS2Q9UQ26 1411 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.27□□□□□ -1.41
A1CF-205ENST00000374001 CCDC173Q0VFZ6 552 aa6.27□□□□□ -1.41
A1CF-205ENST00000374001 U3KPZ7 1027 aaPredicted RBP6.27□□□□□ -1.41
A1CF-205ENST00000374001 MYOM2P54296 1465 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 KRT85P78386 507 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 BMP2KLQ5H9B9 411 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 CDCA7LQ96GN5 454 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 CCDC192P0DO97 292 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 HDAC1Q13547 482 aaPredicted RBP6.26□□□□□ -1.41
A1CF-205ENST00000374001 PIK3R4Q99570 1358 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 ZC3H13Q5T200 1668 aaKnown RBP6.26□□□□□ -1.41
A1CF-205ENST00000374001 DBF4Q9UBU7 674 aaPredicted RBP6.26□□□□□ -1.41
A1CF-205ENST00000374001 NEK4P51957 841 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 RDXP35241 583 aaKnown RBP6.26□□□□□ -1.41
A1CF-205ENST00000374001 PRDM11Q9NQV5 511 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 MYO6Q9UM54 1294 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 SAMD9LQ8IVG5 1584 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 TEX35Q5T0J7 233 aa6.26□□□□□ -1.41
A1CF-205ENST00000374001 DISP3Q9P2K9 1392 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 CCDC196A0A1B0GTZ2 297 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 VPS37CA5D8V6 355 aaPredicted RBP6.25□□□□□ -1.41
A1CF-205ENST00000374001 FAM43AQ8N2R8 423 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 ZFYVE16Q7Z3T8 1539 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 SDF4Q9BRK5 362 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 EDC4Q6P2E9 1401 aaKnown RBP6.25□□□□□ -1.41
A1CF-205ENST00000374001 TRAK2O60296 914 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 CLSTN1O94985 981 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 CDR1P51861 262 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 NEUROD6Q96NK8 337 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 STIM1Q13586 685 aa6.25□□□□□ -1.41
A1CF-205ENST00000374001 KIF2AO00139 706 aaPredicted RBP6.25□□□□□ -1.41
A1CF-205ENST00000374001 MEX3CQ5U5Q3 659 aaKnown RBP6.25□□□□□ -1.41
A1CF-205ENST00000374001 NPATQ14207 1427 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 SRGAP3O43295 1099 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 AMER1Q5JTC6 1135 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 DUSP27Q5VZP5 1158 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 ADGRF5Q8IZF2 1346 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 TRPM1Q7Z4N2 1603 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 A0A0U1RQG5 324 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 WASHC4Q2M389 1173 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 HMG20BQ9P0W2 317 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 CEP126Q9P2H0 1117 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 CTDP1Q9Y5B0 961 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 BLOC1S2Q6QNY1 142 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 SMARCE1Q969G3 411 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 FLT4P35916 1363 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 HSP90AA2PQ14568 343 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 MPHOSPH8Q99549 860 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 SCAND2PQ9GZW5 306 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 TOM1L2Q6ZVM7 507 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 PRDM15P57071 1507 aaPredicted RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 FILIP1LQ4L180 1135 aa6.24□□□□□ -1.41
A1CF-205ENST00000374001 NOL8Q76FK4 1167 aaKnown RBP6.24□□□□□ -1.41
A1CF-205ENST00000374001 ANAPC15P60006 121 aa6.23□□□□□ -1.41
A1CF-205ENST00000374001 SSH1Q8WYL5 1049 aa6.23□□□□□ -1.41
A1CF-205ENST00000374001 PYM1Q9BRP8 204 aaKnown RBP6.23□□□□□ -1.41
A1CF-205ENST00000374001 YTHDC2Q9H6S0 1430 aaKnown RBP6.23□□□□□ -1.41
A1CF-205ENST00000374001 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms