RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TATP17735 454 aaPredicted RBP24.72■■□□□ 1.55
PBX3-205ENST00000373492 PPP2R1AP30153 589 aa24.72■■□□□ 1.55
PBX3-205ENST00000373492 EIF4A2Q14240 407 aaKnown RBP24.72■■□□□ 1.55
PBX3-205ENST00000373492 EYA1Q99502 592 aa24.72■■□□□ 1.55
PBX3-205ENST00000373492 CAMKK2Q96RR4 588 aa24.71■■□□□ 1.55
PBX3-205ENST00000373492 KAT6BQ8WYB5 2073 aa24.7■■□□□ 1.54
PBX3-205ENST00000373492 DDX54Q8TDD1 881 aaKnown RBP24.7■■□□□ 1.54
PBX3-205ENST00000373492 CFAP53Q96M91 514 aa24.7■■□□□ 1.54
PBX3-205ENST00000373492 SBF2Q86WG5 1849 aa24.7■■□□□ 1.54
PBX3-205ENST00000373492 EZH2Q15910 746 aaKnown RBP24.68■■□□□ 1.54
PBX3-205ENST00000373492 PLSCR1O15162 318 aa24.66■■□□□ 1.54
PBX3-205ENST00000373492 DIAPH1O60610 1272 aaKnown RBP24.66■■□□□ 1.54
PBX3-205ENST00000373492 SHANK3Q9BYB0 1731 aa24.66■■□□□ 1.54
PBX3-205ENST00000373492 COL3A1P02461 1466 aaPredicted RBP24.65■■□□□ 1.54
PBX3-205ENST00000373492 IGSF1Q8N6C5 1336 aa24.64■■□□□ 1.54
PBX3-205ENST00000373492 MYBBP1AQ9BQG0 1328 aaKnown RBP24.64■■□□□ 1.54
PBX3-205ENST00000373492 PKD1L3Q7Z443 1732 aa24.64■■□□□ 1.54
PBX3-205ENST00000373492 PTF1AQ7RTS3 328 aa24.64■■□□□ 1.54
PBX3-205ENST00000373492 PRKRIP1Q9H875 184 aaPredicted RBP24.64■■□□□ 1.54
PBX3-205ENST00000373492 PCDH11XQ9BZA7 1347 aa24.63■■□□□ 1.53
PBX3-205ENST00000373492 PCDH11YQ9BZA8 1340 aa24.63■■□□□ 1.53
PBX3-205ENST00000373492 KCNQ2O43526 872 aa24.63■■□□□ 1.53
PBX3-205ENST00000373492 IL13P35225 146 aa24.63■■□□□ 1.53
PBX3-205ENST00000373492 ACSBG1Q96GR2 724 aa24.63■■□□□ 1.53
PBX3-205ENST00000373492 PLEKHG2Q9H7P9 1386 aa24.63■■□□□ 1.53
PBX3-205ENST00000373492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.62■■□□□ 1.53
PBX3-205ENST00000373492 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
PBX3-205ENST00000373492 NHSQ6T4R5 1651 aa24.61■■□□□ 1.53
PBX3-205ENST00000373492 VIRMAQ69YN4 1812 aaKnown RBP24.59■■□□□ 1.53
PBX3-205ENST00000373492 ANP32CO43423 234 aa24.59■■□□□ 1.53
PBX3-205ENST00000373492 RGPD3A6NKT7 1758 aaPredicted RBP24.59■■□□□ 1.53
PBX3-205ENST00000373492 RGPD4Q7Z3J3 1758 aa24.59■■□□□ 1.53
PBX3-205ENST00000373492 NUDCQ9Y266 331 aa24.58■■□□□ 1.53
PBX3-205ENST00000373492 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
PBX3-205ENST00000373492 CYP27B1O15528 508 aa24.56■■□□□ 1.52
PBX3-205ENST00000373492 RREB1Q92766 1687 aa24.56■■□□□ 1.52
PBX3-205ENST00000373492 PRIM1P49642 420 aaKnown RBP24.55■■□□□ 1.52
PBX3-205ENST00000373492 SULT6B1Q6IMI4 303 aa24.55■■□□□ 1.52
PBX3-205ENST00000373492 NBPF14Q5TI25 921 aa24.54■■□□□ 1.52
PBX3-205ENST00000373492 KDRP35968 1356 aa24.54■■□□□ 1.52
PBX3-205ENST00000373492 NKX1-1Q15270 411 aaPredicted RBP24.53■■□□□ 1.52
PBX3-205ENST00000373492 SYTL4Q96C24 671 aaPredicted RBP24.53■■□□□ 1.52
PBX3-205ENST00000373492 AMOTQ4VCS5 1084 aa24.52■■□□□ 1.52
PBX3-205ENST00000373492 IFNL2Q8IZJ0 200 aa24.52■■□□□ 1.52
PBX3-205ENST00000373492 PROM2Q8N271 834 aa24.52■■□□□ 1.52
PBX3-205ENST00000373492 HMOX1P09601 288 aa24.51■■□□□ 1.51
PBX3-205ENST00000373492 TXNRD1Q16881 649 aa24.51■■□□□ 1.51
PBX3-205ENST00000373492 PLEKHO1Q53GL0 409 aaPredicted RBP24.51■■□□□ 1.51
PBX3-205ENST00000373492 AEBP1Q8IUX7 1158 aa24.51■■□□□ 1.51
PBX3-205ENST00000373492 DOT1LQ8TEK3 1739 aa24.51■■□□□ 1.51
PBX3-205ENST00000373492 NUP188Q5SRE5 1749 aa24.5■■□□□ 1.51
PBX3-205ENST00000373492 BTAF1O14981 1849 aa24.49■■□□□ 1.51
PBX3-205ENST00000373492 PHKG2P15735 406 aa24.49■■□□□ 1.51
PBX3-205ENST00000373492 ITGB4P16144 1822 aa24.49■■□□□ 1.51
PBX3-205ENST00000373492 U2AF1L5P0DN76 240 aaPredicted RBP24.48■■□□□ 1.51
PBX3-205ENST00000373492 U2AF1Q01081 240 aaKnown RBP eCLIP24.48■■□□□ 1.51
PBX3-205ENST00000373492 R3HDM1Q15032 1099 aaKnown RBP24.48■■□□□ 1.51
PBX3-205ENST00000373492 PSDA5PKW4 1024 aaPredicted RBP24.47■■□□□ 1.51
PBX3-205ENST00000373492 HSP90AB1P08238 724 aaKnown RBP24.45■■□□□ 1.5
PBX3-205ENST00000373492 DLG5Q8TDM6 1919 aa24.45■■□□□ 1.5
PBX3-205ENST00000373492 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
PBX3-205ENST00000373492 SLC27A3Q5K4L6 730 aa24.44■■□□□ 1.5
PBX3-205ENST00000373492 ZNF530Q6P9A1 599 aaPredicted RBP24.43■■□□□ 1.5
PBX3-205ENST00000373492 MPRIPQ6WCQ1 1025 aa24.43■■□□□ 1.5
PBX3-205ENST00000373492 FCHSD2O94868 740 aa24.42■■□□□ 1.5
PBX3-205ENST00000373492 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
PBX3-205ENST00000373492 C1orf141Q5JVX7 400 aa24.41■■□□□ 1.5
PBX3-205ENST00000373492 DCAF5Q96JK2 942 aa24.41■■□□□ 1.5
PBX3-205ENST00000373492 WDR43Q15061 677 aaKnown RBP eCLIP24.4■■□□□ 1.5
PBX3-205ENST00000373492 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
PBX3-205ENST00000373492 PNNQ9H307 717 aaKnown RBP24.4■■□□□ 1.5
PBX3-205ENST00000373492 ANO8Q9HCE9 1232 aaPredicted RBP24.4■■□□□ 1.5
PBX3-205ENST00000373492 NEFMP07197 916 aa24.39■■□□□ 1.49
PBX3-205ENST00000373492 PRKAR2BP31323 418 aa24.39■■□□□ 1.49
PBX3-205ENST00000373492 PIGBQ92521 554 aa24.39■■□□□ 1.49
PBX3-205ENST00000373492 LRRC4BQ9NT99 713 aa24.39■■□□□ 1.49
PBX3-205ENST00000373492 STK32BQ9NY57 414 aa24.39■■□□□ 1.49
PBX3-205ENST00000373492 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
PBX3-205ENST00000373492 SMARCC1Q92922 1105 aaPredicted RBP24.38■■□□□ 1.49
PBX3-205ENST00000373492 TMOD3Q9NYL9 352 aa24.38■■□□□ 1.49
PBX3-205ENST00000373492 SRCAPQ6ZRS2 3230 aa24.37■■□□□ 1.49
PBX3-205ENST00000373492 SLC15A2Q16348 729 aa24.37■■□□□ 1.49
PBX3-205ENST00000373492 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
PBX3-205ENST00000373492 HMGB2P26583 209 aaKnown RBP24.36■■□□□ 1.49
PBX3-205ENST00000373492 AKAP4Q5JQC9 854 aa24.36■■□□□ 1.49
PBX3-205ENST00000373492 PALLDQ8WX93 1383 aa24.35■■□□□ 1.49
PBX3-205ENST00000373492 CCNL1Q9UK58 526 aaPredicted RBP24.35■■□□□ 1.49
PBX3-205ENST00000373492 LY75O60449 1722 aa24.35■■□□□ 1.49
PBX3-205ENST00000373492 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
PBX3-205ENST00000373492 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
PBX3-205ENST00000373492 PAPPAQ13219 1627 aa24.33■■□□□ 1.49
PBX3-205ENST00000373492 MTHFSDQ2M296 383 aaKnown RBP24.33■■□□□ 1.49
PBX3-205ENST00000373492 KDM6AO15550 1401 aaPredicted RBP24.33■■□□□ 1.49
PBX3-205ENST00000373492 MAPK8IP3Q9UPT6 1336 aa24.32■■□□□ 1.48
PBX3-205ENST00000373492 ADAMTS7Q9UKP4 1686 aa24.31■■□□□ 1.48
PBX3-205ENST00000373492 CABP4P57796 275 aa24.31■■□□□ 1.48
PBX3-205ENST00000373492 CCDC184Q52MB2 194 aa24.3■■□□□ 1.48
PBX3-205ENST00000373492 AKT1S1Q96B36 256 aa24.3■■□□□ 1.48
PBX3-205ENST00000373492 PHACTR3Q96KR7 559 aa24.3■■□□□ 1.48
PBX3-205ENST00000373492 KCNQ4P56696 695 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms