RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 ANKRD24Q8TF21 1146 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 WDR7Q9Y4E6 1490 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 RABEP1Q15276 862 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
NDC1-201ENST00000371429 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.41
NDC1-201ENST00000371429 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.41
NDC1-201ENST00000371429 ZNF518AQ6AHZ1 1483 aa17.58■□□□□ 0.4
NDC1-201ENST00000371429 TRIM22Q8IYM9 498 aa17.58■□□□□ 0.4
NDC1-201ENST00000371429 C11orf95C9JLR9 678 aaPredicted RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
NDC1-201ENST00000371429 IFIT1P09914 478 aaKnown RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
NDC1-201ENST00000371429 AKAP2Q9Y2D5 859 aa17.57■□□□□ 0.4
NDC1-201ENST00000371429 HSPA2P54652 639 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 CAVIN4Q5BKX8 364 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 CDK5RAP3Q96JB5 506 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
NDC1-201ENST00000371429 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
NDC1-201ENST00000371429 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 GOLGA6L1Q8N7Z2 621 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 TXLNAP40222 546 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 UBAC1Q9BSL1 405 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 NSD2O96028 1365 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 AIDAQ96BJ3 306 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 AK7Q96M32 723 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
NDC1-201ENST00000371429 ZBTB3Q9H5J0 574 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 CWC27Q6UX04 472 aaKnown RBP17.54■□□□□ 0.4
NDC1-201ENST00000371429 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
NDC1-201ENST00000371429 GPTP24298 496 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 STK3Q13188 491 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 NUTM1Q86Y26 1132 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
NDC1-201ENST00000371429 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
NDC1-201ENST00000371429 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 ARID3AQ99856 593 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 A0A087WZG4 1122 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 F6X3S4 739 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 EPS15P42566 896 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 STK38Q15208 465 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 TTC21AQ8NDW8 1320 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 GSE1Q14687 1217 aa17.52■□□□□ 0.39
NDC1-201ENST00000371429 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
NDC1-201ENST00000371429 ZNF396Q96N95 335 aaPredicted RBP17.51■□□□□ 0.39
NDC1-201ENST00000371429 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
NDC1-201ENST00000371429 KINO60870 393 aaKnown RBP17.51■□□□□ 0.39
NDC1-201ENST00000371429 KRT18P05783 430 aaKnown RBP17.51■□□□□ 0.39
NDC1-201ENST00000371429 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 OFD1O75665 1012 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 CCDC70Q6NSX1 233 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
NDC1-201ENST00000371429 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 RARSP54136 660 aaKnown RBP17.5■□□□□ 0.39
NDC1-201ENST00000371429 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 C8orf37Q96NL8 207 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 CT47A1Q5JQC4 288 aaPredicted RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 CEBPZQ03701 1054 aaKnown RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 FBLN1P23142 703 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 FLIIQ13045 1269 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 KRT32Q14532 448 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
NDC1-201ENST00000371429 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 ABCC10Q5T3U5 1492 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 USP5P45974 858 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 RFC4P35249 363 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 ZNF592Q92610 1267 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 FIBPO43427 364 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 IMMTQ16891 758 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 DZIP1Q86YF9 867 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 C6orf229H3BNL8 230 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms