RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 SSH1Q8WYL5 1049 aa24.71■■□□□ 1.55
UBL4A-202ENST00000369660 NLRP2Q9NX02 1062 aa24.7■■□□□ 1.54
UBL4A-202ENST00000369660 ERBB3P21860 1342 aa24.7■■□□□ 1.54
UBL4A-202ENST00000369660 CSB-PGBD3P0DP91 1061 aa24.69■■□□□ 1.54
UBL4A-202ENST00000369660 C8orf58Q8NAV2 365 aa24.68■■□□□ 1.54
UBL4A-202ENST00000369660 COG6Q9Y2V7 657 aa24.67■■□□□ 1.54
UBL4A-202ENST00000369660 GNAT3A8MTJ3 354 aa24.66■■□□□ 1.54
UBL4A-202ENST00000369660 PRDM11Q9NQV5 511 aa24.66■■□□□ 1.54
UBL4A-202ENST00000369660 RLBP1P12271 317 aa24.66■■□□□ 1.54
UBL4A-202ENST00000369660 LTBP4Q8N2S1 1624 aa24.64■■□□□ 1.54
UBL4A-202ENST00000369660 IL17REQ8NFR9 667 aa24.64■■□□□ 1.54
UBL4A-202ENST00000369660 PIP4K2BP78356 416 aa24.64■■□□□ 1.53
UBL4A-202ENST00000369660 TWISTNBQ3B726 338 aaPredicted RBP24.64■■□□□ 1.53
UBL4A-202ENST00000369660 VAMP4O75379 141 aa24.63■■□□□ 1.53
UBL4A-202ENST00000369660 CRYBG1Q9Y4K1 1723 aa24.63■■□□□ 1.53
UBL4A-202ENST00000369660 CRB1P82279 1406 aa24.62■■□□□ 1.53
UBL4A-202ENST00000369660 CHL1O00533 1208 aa24.62■■□□□ 1.53
UBL4A-202ENST00000369660 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
UBL4A-202ENST00000369660 LGR6Q9HBX8 967 aa24.62■■□□□ 1.53
UBL4A-202ENST00000369660 NOB1Q9ULX3 412 aaKnown RBP24.62■■□□□ 1.53
UBL4A-202ENST00000369660 MAP3K5Q99683 1374 aa24.62■■□□□ 1.53
UBL4A-202ENST00000369660 TSPYL4Q9UJ04 414 aa24.61■■□□□ 1.53
UBL4A-202ENST00000369660 ROBO1Q9Y6N7 1651 aa24.61■■□□□ 1.53
UBL4A-202ENST00000369660 CT47B1P0C2W7 299 aaPredicted RBP24.6■■□□□ 1.53
UBL4A-202ENST00000369660 MPRIPQ6WCQ1 1025 aa24.6■■□□□ 1.53
UBL4A-202ENST00000369660 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
UBL4A-202ENST00000369660 COL18A1P39060 1754 aa24.59■■□□□ 1.53
UBL4A-202ENST00000369660 NHSL1Q5SYE7 1610 aa24.59■■□□□ 1.53
UBL4A-202ENST00000369660 STRN4Q9NRL3 753 aa24.58■■□□□ 1.53
UBL4A-202ENST00000369660 PLEKHO1Q53GL0 409 aaPredicted RBP24.57■■□□□ 1.52
UBL4A-202ENST00000369660 ZKSCAN2Q63HK3 967 aa24.57■■□□□ 1.52
UBL4A-202ENST00000369660 TRIM27P14373 513 aa24.57■■□□□ 1.52
UBL4A-202ENST00000369660 PDE3AQ14432 1141 aa24.57■■□□□ 1.52
UBL4A-202ENST00000369660 FTSJ3Q8IY81 847 aaKnown RBP24.57■■□□□ 1.52
UBL4A-202ENST00000369660 RAPGEF4Q8WZA2 1011 aa24.56■■□□□ 1.52
UBL4A-202ENST00000369660 CPDO75976 1380 aa24.56■■□□□ 1.52
UBL4A-202ENST00000369660 SKAP1Q86WV1 359 aa24.54■■□□□ 1.52
UBL4A-202ENST00000369660 USP35Q9P2H5 1018 aa24.54■■□□□ 1.52
UBL4A-202ENST00000369660 C1orf141Q5JVX7 400 aa24.54■■□□□ 1.52
UBL4A-202ENST00000369660 TOM1L2Q6ZVM7 507 aa24.54■■□□□ 1.52
UBL4A-202ENST00000369660 CAMTA1Q9Y6Y1 1673 aa24.53■■□□□ 1.52
UBL4A-202ENST00000369660 NECTIN2Q92692 538 aa24.53■■□□□ 1.52
UBL4A-202ENST00000369660 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
UBL4A-202ENST00000369660 DZIP1LQ8IYY4 767 aaKnown RBP24.52■■□□□ 1.52
UBL4A-202ENST00000369660 ATF7IPQ6VMQ6 1270 aa24.52■■□□□ 1.52
UBL4A-202ENST00000369660 ALDH1L2Q3SY69 923 aa24.51■■□□□ 1.51
UBL4A-202ENST00000369660 AMOTQ4VCS5 1084 aa24.51■■□□□ 1.51
UBL4A-202ENST00000369660 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
UBL4A-202ENST00000369660 MRPL50Q8N5N7 158 aaKnown RBP24.51■■□□□ 1.51
UBL4A-202ENST00000369660 NCAPD2Q15021 1401 aa24.51■■□□□ 1.51
UBL4A-202ENST00000369660 MEGF6O75095 1541 aa24.51■■□□□ 1.51
UBL4A-202ENST00000369660 ABCA3Q99758 1704 aa24.5■■□□□ 1.51
UBL4A-202ENST00000369660 TATP17735 454 aaPredicted RBP24.5■■□□□ 1.51
UBL4A-202ENST00000369660 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
UBL4A-202ENST00000369660 LARP1Q6PKG0 1096 aaKnown RBP24.5■■□□□ 1.51
UBL4A-202ENST00000369660 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
UBL4A-202ENST00000369660 EVA1CP58658 441 aa24.49■■□□□ 1.51
UBL4A-202ENST00000369660 ITPRIPQ8IWB1 547 aa24.49■■□□□ 1.51
UBL4A-202ENST00000369660 KIF16BQ96L93 1317 aa24.48■■□□□ 1.51
UBL4A-202ENST00000369660 KCNQ3O43525 872 aa24.48■■□□□ 1.51
UBL4A-202ENST00000369660 TEFQ10587 303 aa24.47■■□□□ 1.51
UBL4A-202ENST00000369660 TMEM57Q8N5G2 664 aa24.47■■□□□ 1.51
UBL4A-202ENST00000369660 FAM208AQ9UK61 1670 aaKnown RBP24.47■■□□□ 1.51
UBL4A-202ENST00000369660 BTG4Q9NY30 223 aa24.46■■□□□ 1.51
UBL4A-202ENST00000369660 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
UBL4A-202ENST00000369660 WDR17Q8IZU2 1322 aa24.46■■□□□ 1.51
UBL4A-202ENST00000369660 RNMTO43148 476 aaKnown RBP24.46■■□□□ 1.51
UBL4A-202ENST00000369660 MVPQ14764 893 aaKnown RBP24.46■■□□□ 1.51
UBL4A-202ENST00000369660 CEMIPQ8WUJ3 1361 aa24.46■■□□□ 1.51
UBL4A-202ENST00000369660 COL5A2P05997 1499 aaPredicted RBP24.46■■□□□ 1.51
UBL4A-202ENST00000369660 UBAP1LF5GYI3 381 aa24.45■■□□□ 1.51
UBL4A-202ENST00000369660 ADAMTS2O95450 1211 aa24.45■■□□□ 1.51
UBL4A-202ENST00000369660 LRRC37A3O60309 1634 aa24.45■■□□□ 1.5
UBL4A-202ENST00000369660 IPO8O15397 1037 aaKnown RBP24.44■■□□□ 1.5
UBL4A-202ENST00000369660 TOM1O60784 492 aa24.44■■□□□ 1.5
UBL4A-202ENST00000369660 ZNF428Q96B54 188 aa24.44■■□□□ 1.5
UBL4A-202ENST00000369660 NUTM2BA6NNL0 878 aaPredicted RBP24.44■■□□□ 1.5
UBL4A-202ENST00000369660 NUTM2EB1AL46 878 aaPredicted RBP24.44■■□□□ 1.5
UBL4A-202ENST00000369660 NUTM2AQ8IVF1 878 aaPredicted RBP24.44■■□□□ 1.5
UBL4A-202ENST00000369660 BTBD11A6QL63 1104 aa24.43■■□□□ 1.5
UBL4A-202ENST00000369660 SLC4A2P04920 1241 aa24.43■■□□□ 1.5
UBL4A-202ENST00000369660 TSHZ2Q9NRE2 1034 aa24.43■■□□□ 1.5
UBL4A-202ENST00000369660 SPG7Q9UQ90 795 aa24.42■■□□□ 1.5
UBL4A-202ENST00000369660 CYP27B1O15528 508 aa24.41■■□□□ 1.5
UBL4A-202ENST00000369660 IGHDP01880 384 aa24.41■■□□□ 1.5
UBL4A-202ENST00000369660 VIRMAQ69YN4 1812 aaKnown RBP24.41■■□□□ 1.5
UBL4A-202ENST00000369660 PHKG2P15735 406 aa24.4■■□□□ 1.5
UBL4A-202ENST00000369660 PCDHB15Q9Y5E8 787 aa24.4■■□□□ 1.5
UBL4A-202ENST00000369660 AHDC1Q5TGY3 1603 aaPredicted RBP24.4■■□□□ 1.5
UBL4A-202ENST00000369660 PHLPP1O60346 1717 aa24.39■■□□□ 1.5
UBL4A-202ENST00000369660 EIF2S2P20042 333 aaKnown RBP24.39■■□□□ 1.49
UBL4A-202ENST00000369660 G2E3Q7L622 706 aa24.39■■□□□ 1.49
UBL4A-202ENST00000369660 SLC39A6Q13433 755 aa24.38■■□□□ 1.49
UBL4A-202ENST00000369660 ABCC6O95255 1503 aa24.38■■□□□ 1.49
UBL4A-202ENST00000369660 BRPF1P55201 1214 aaPredicted RBP24.37■■□□□ 1.49
UBL4A-202ENST00000369660 IFNL2Q8IZJ0 200 aa24.37■■□□□ 1.49
UBL4A-202ENST00000369660 NFATC2IPQ8NCF5 419 aa24.37■■□□□ 1.49
UBL4A-202ENST00000369660 KDM2BQ8NHM5 1336 aa24.37■■□□□ 1.49
UBL4A-202ENST00000369660 DDX54Q8TDD1 881 aaKnown RBP24.37■■□□□ 1.49
UBL4A-202ENST00000369660 MS4A1P11836 297 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms