RNA–Protein interactions for RNA: ENST00000369528.9

SIKE1-203, Transcript of suppressor of IKBKE 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SIKE1, Length 5,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-203ENST00000369528 SMC1AQ14683 1233 aaKnown RBP18.35■□□□□ 0.53
SIKE1-203ENST00000369528 TNNT1P13805 278 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 TMEM132AQ24JP5 1023 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 BCAR3O75815 825 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 PLEKHH1Q9ULM0 1364 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
SIKE1-203ENST00000369528 CEP131Q9UPN4 1083 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 PRIMPOLQ96LW4 560 aa18.34■□□□□ 0.53
SIKE1-203ENST00000369528 XPCQ01831 940 aaPredicted RBP18.33■□□□□ 0.53
SIKE1-203ENST00000369528 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.53
SIKE1-203ENST00000369528 TICAM2Q86XR7 235 aa18.33■□□□□ 0.53
SIKE1-203ENST00000369528 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.53
SIKE1-203ENST00000369528 BMS1Q14692 1282 aaKnown RBP18.33■□□□□ 0.53
SIKE1-203ENST00000369528 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.52
SIKE1-203ENST00000369528 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
SIKE1-203ENST00000369528 TIGD1Q96MW7 591 aa18.33■□□□□ 0.52
SIKE1-203ENST00000369528 SCAND2PQ9GZW5 306 aaPredicted RBP18.33■□□□□ 0.52
SIKE1-203ENST00000369528 CETN2P41208 172 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 RNF187Q5TA31 235 aaPredicted RBP18.32■□□□□ 0.52
SIKE1-203ENST00000369528 GCOM1H8Y6P7 765 aaPredicted RBP18.32■□□□□ 0.52
SIKE1-203ENST00000369528 CTAGE5O15320 804 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 MYZAPP0CAP1 466 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 GTF2F1P35269 517 aaKnown RBP eCLIP18.32■□□□□ 0.52
SIKE1-203ENST00000369528 PPP4R3BQ5MIZ7 849 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 SMARCC1Q92922 1105 aaPredicted RBP18.32■□□□□ 0.52
SIKE1-203ENST00000369528 GSDMDP57764 484 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 PAF1Q8N7H5 531 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 POLR3GO15318 223 aaPredicted RBP18.32■□□□□ 0.52
SIKE1-203ENST00000369528 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 CLIP2Q9UDT6 1046 aa18.32■□□□□ 0.52
SIKE1-203ENST00000369528 DESP17661 470 aa18.31■□□□□ 0.52
SIKE1-203ENST00000369528 GPATCH11Q8N954 259 aa18.31■□□□□ 0.52
SIKE1-203ENST00000369528 GNL3LQ9NVN8 582 aaKnown RBP18.3■□□□□ 0.52
SIKE1-203ENST00000369528 GOLGA6L9A6NEM1 432 aa18.3■□□□□ 0.52
SIKE1-203ENST00000369528 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
SIKE1-203ENST00000369528 SEPT11Q9NVA2 429 aaKnown RBP18.3■□□□□ 0.52
SIKE1-203ENST00000369528 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
SIKE1-203ENST00000369528 ZHX3Q9H4I2 956 aa18.3■□□□□ 0.52
SIKE1-203ENST00000369528 STAMBPO95630 424 aa18.3■□□□□ 0.52
SIKE1-203ENST00000369528 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
SIKE1-203ENST00000369528 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
SIKE1-203ENST00000369528 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
SIKE1-203ENST00000369528 PAFAH1B1P43034 410 aa18.29■□□□□ 0.52
SIKE1-203ENST00000369528 IFFO1Q0D2I5 559 aa18.29■□□□□ 0.52
SIKE1-203ENST00000369528 CCDC175P0C221 793 aa18.29■□□□□ 0.52
SIKE1-203ENST00000369528 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
SIKE1-203ENST00000369528 LUZP1Q86V48 1076 aa18.29■□□□□ 0.52
SIKE1-203ENST00000369528 UVSSAQ2YD98 709 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 PAXBP1Q9Y5B6 917 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 NUTM2GQ5VZR2 741 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 ZMYND15Q9H091 742 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 NF2P35240 595 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 FAM69CQ0P6D2 419 aa18.28■□□□□ 0.52
SIKE1-203ENST00000369528 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
SIKE1-203ENST00000369528 CAMK4Q16566 473 aa18.27■□□□□ 0.52
SIKE1-203ENST00000369528 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
SIKE1-203ENST00000369528 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
SIKE1-203ENST00000369528 USO1O60763 962 aaKnown RBP18.27■□□□□ 0.51
SIKE1-203ENST00000369528 FKBP15Q5T1M5 1219 aa18.27■□□□□ 0.51
SIKE1-203ENST00000369528 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.51
SIKE1-203ENST00000369528 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.51
SIKE1-203ENST00000369528 CCDC113Q9H0I3 377 aa18.27■□□□□ 0.51
SIKE1-203ENST00000369528 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.51
SIKE1-203ENST00000369528 IGF1RP08069 1367 aa18.26■□□□□ 0.51
SIKE1-203ENST00000369528 SPECC1LQ69YQ0 1117 aa18.26■□□□□ 0.51
SIKE1-203ENST00000369528 TMEM132EQ6IEE7 984 aa18.26■□□□□ 0.51
SIKE1-203ENST00000369528 NAA15Q9BXJ9 866 aaKnown RBP18.26■□□□□ 0.51
SIKE1-203ENST00000369528 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
SIKE1-203ENST00000369528 POTEJP0CG39 1038 aa18.26■□□□□ 0.51
SIKE1-203ENST00000369528 SPATA24Q86W54 205 aa18.26■□□□□ 0.51
SIKE1-203ENST00000369528 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 DNAAF4Q8WXU2 420 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 VPS36Q86VN1 386 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 KRT222Q8N1A0 295 aa18.25■□□□□ 0.51
SIKE1-203ENST00000369528 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
SIKE1-203ENST00000369528 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
SIKE1-203ENST00000369528 IVLP07476 585 aa18.24■□□□□ 0.51
SIKE1-203ENST00000369528 CEP63Q96MT8 703 aa18.24■□□□□ 0.51
SIKE1-203ENST00000369528 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
SIKE1-203ENST00000369528 IBSPP21815 317 aaPredicted RBP18.24■□□□□ 0.51
SIKE1-203ENST00000369528 PPP1R12BO60237 982 aaPredicted RBP18.24■□□□□ 0.51
SIKE1-203ENST00000369528 GTF2A1P52655 376 aaPredicted RBP18.24■□□□□ 0.51
SIKE1-203ENST00000369528 PPM1EQ8WY54 764 aa18.24■□□□□ 0.51
SIKE1-203ENST00000369528 C16orf45Q96MC5 204 aaPredicted RBP18.24■□□□□ 0.51
SIKE1-203ENST00000369528 CNNM1Q9NRU3 951 aa18.24■□□□□ 0.51
SIKE1-203ENST00000369528 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
SIKE1-203ENST00000369528 LMAN1P49257 510 aa18.24■□□□□ 0.51
SIKE1-203ENST00000369528 MNAT1P51948 309 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms