RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ZSCAN30Q86W11 494 aa15.8■□□□□ 0.12
PTPRK-204ENST00000368210 AACSQ86V21 672 aa15.8■□□□□ 0.12
PTPRK-204ENST00000368210 HOOK1Q9UJC3 728 aaKnown RBP15.8■□□□□ 0.12
PTPRK-204ENST00000368210 RDXP35241 583 aaKnown RBP15.8■□□□□ 0.12
PTPRK-204ENST00000368210 ASXL1Q8IXJ9 1541 aa15.8■□□□□ 0.12
PTPRK-204ENST00000368210 CGNQ9P2M7 1197 aaKnown RBP15.8■□□□□ 0.12
PTPRK-204ENST00000368210 IRX3P78415 501 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-204ENST00000368210 CIZ1Q9ULV3 898 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-204ENST00000368210 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
PTPRK-204ENST00000368210 TSR1Q2NL82 804 aaKnown RBP15.79■□□□□ 0.12
PTPRK-204ENST00000368210 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
PTPRK-204ENST00000368210 FYB1O15117 783 aa15.79■□□□□ 0.12
PTPRK-204ENST00000368210 TPM1P09493 284 aa15.79■□□□□ 0.12
PTPRK-204ENST00000368210 RBM33Q96EV2 1170 aaKnown RBP15.79■□□□□ 0.12
PTPRK-204ENST00000368210 CALCOCO1Q9P1Z2 691 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 FIBPO43427 364 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 IL16Q14005 1332 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 CNNM1Q9NRU3 951 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 DHX16O60231 1041 aaKnown RBP15.78■□□□□ 0.12
PTPRK-204ENST00000368210 SDF4Q9BRK5 362 aa15.78■□□□□ 0.12
PTPRK-204ENST00000368210 FOXO3O43524 673 aa15.77■□□□□ 0.12
PTPRK-204ENST00000368210 ZNF518AQ6AHZ1 1483 aa15.77■□□□□ 0.12
PTPRK-204ENST00000368210 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.12
PTPRK-204ENST00000368210 F6X3S4 739 aa15.77■□□□□ 0.12
PTPRK-204ENST00000368210 MCM4P33991 863 aa15.77■□□□□ 0.12
PTPRK-204ENST00000368210 CLCN1P35523 988 aa15.77■□□□□ 0.12
PTPRK-204ENST00000368210 MEX3CQ5U5Q3 659 aaKnown RBP15.77■□□□□ 0.11
PTPRK-204ENST00000368210 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.11
PTPRK-204ENST00000368210 RAD21O60216 631 aa15.77■□□□□ 0.11
PTPRK-204ENST00000368210 FBXW7Q969H0 707 aa15.77■□□□□ 0.11
PTPRK-204ENST00000368210 FBLN1P23142 703 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 CWC27Q6UX04 472 aaKnown RBP15.76■□□□□ 0.11
PTPRK-204ENST00000368210 KIF1BPQ96EK5 621 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 PZPP20742 1482 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
PTPRK-204ENST00000368210 DISP1Q96F81 1524 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
PTPRK-204ENST00000368210 MX1P20591 662 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 AMOTQ4VCS5 1084 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 TTC39AQ5SRH9 613 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 ACEP12821 1306 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 ARHGEF12Q9NZN5 1544 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 ANKRD1Q15327 319 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 NUTM1Q86Y26 1132 aa15.76■□□□□ 0.11
PTPRK-204ENST00000368210 SART3Q15020 963 aaKnown RBP15.75■□□□□ 0.11
PTPRK-204ENST00000368210 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
PTPRK-204ENST00000368210 USP8P40818 1118 aa15.75■□□□□ 0.11
PTPRK-204ENST00000368210 IGHDP01880 384 aa15.75■□□□□ 0.11
PTPRK-204ENST00000368210 ACBD3Q9H3P7 528 aa15.75■□□□□ 0.11
PTPRK-204ENST00000368210 MBIPQ9NS73 344 aa15.75■□□□□ 0.11
PTPRK-204ENST00000368210 LETM1O95202 739 aaPredicted RBP15.75■□□□□ 0.11
PTPRK-204ENST00000368210 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
PTPRK-204ENST00000368210 LEKR1Q6ZMV7 388 aa15.74■□□□□ 0.11
PTPRK-204ENST00000368210 ANKRD20A12PQ8NF67 263 aa15.74■□□□□ 0.11
PTPRK-204ENST00000368210 FAM83GA6ND36 823 aa15.74■□□□□ 0.11
PTPRK-204ENST00000368210 BLOC1S2Q6QNY1 142 aa15.74■□□□□ 0.11
PTPRK-204ENST00000368210 CCDC47Q96A33 483 aaKnown RBP15.74■□□□□ 0.11
PTPRK-204ENST00000368210 CEP126Q9P2H0 1117 aa15.74■□□□□ 0.11
PTPRK-204ENST00000368210 DNMT1P26358 1616 aaKnown RBP15.74■□□□□ 0.11
PTPRK-204ENST00000368210 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
PTPRK-204ENST00000368210 HSP90B2PQ58FF3 399 aa15.73■□□□□ 0.11
PTPRK-204ENST00000368210 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.73■□□□□ 0.11
PTPRK-204ENST00000368210 PTPRCP08575 1304 aa15.73■□□□□ 0.11
PTPRK-204ENST00000368210 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
PTPRK-204ENST00000368210 AK7Q96M32 723 aa15.73■□□□□ 0.11
PTPRK-204ENST00000368210 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
PTPRK-204ENST00000368210 XBP1P17861 261 aa15.73■□□□□ 0.11
PTPRK-204ENST00000368210 POLR3AO14802 1390 aaPredicted RBP15.73■□□□□ 0.11
PTPRK-204ENST00000368210 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
PTPRK-204ENST00000368210 FLIIQ13045 1269 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 MPRIPQ6WCQ1 1025 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 CCAR2Q8N163 923 aaKnown RBP15.72■□□□□ 0.11
PTPRK-204ENST00000368210 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 H0YHG0 523 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
PTPRK-204ENST00000368210 STK3Q13188 491 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 LARP1Q6PKG0 1096 aaKnown RBP15.72■□□□□ 0.11
PTPRK-204ENST00000368210 JAKMIP1Q96N16 626 aaKnown RBP15.72■□□□□ 0.11
PTPRK-204ENST00000368210 PUS7Q96PZ0 661 aaKnown RBP15.72■□□□□ 0.11
PTPRK-204ENST00000368210 TSPY26PQ9H489 355 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 TNRQ92752 1358 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 CBX1P83916 185 aa15.72■□□□□ 0.11
PTPRK-204ENST00000368210 NAT10Q9H0A0 1025 aaKnown RBP15.72■□□□□ 0.11
PTPRK-204ENST00000368210 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
PTPRK-204ENST00000368210 EIF2AK4Q9P2K8 1649 aaKnown RBP15.71■□□□□ 0.11
PTPRK-204ENST00000368210 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTPRK-204ENST00000368210 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
PTPRK-204ENST00000368210 MNS1Q8NEH6 495 aa15.71■□□□□ 0.11
PTPRK-204ENST00000368210 DNAAF4Q8WXU2 420 aa15.71■□□□□ 0.11
PTPRK-204ENST00000368210 CARD14Q9BXL6 1004 aa15.71■□□□□ 0.11
PTPRK-204ENST00000368210 PDRG1Q9NUG6 133 aa15.71■□□□□ 0.1
PTPRK-204ENST00000368210 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.1
PTPRK-204ENST00000368210 HOMER1Q86YM7 354 aa15.7■□□□□ 0.1
PTPRK-204ENST00000368210 BRMS1Q9HCU9 246 aa15.7■□□□□ 0.1
PTPRK-204ENST00000368210 RRP12Q5JTH9 1297 aaKnown RBP15.7■□□□□ 0.1
PTPRK-204ENST00000368210 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
PTPRK-204ENST00000368210 KDM4AO75164 1064 aa15.7■□□□□ 0.1
PTPRK-204ENST00000368210 IPO7O95373 1038 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms