RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
MRPL55-216ENST00000366744 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
MRPL55-216ENST00000366744 DDX54Q8TDD1 881 aaKnown RBP12.66□□□□□ -0.38
MRPL55-216ENST00000366744 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
MRPL55-216ENST00000366744 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
MRPL55-216ENST00000366744 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
MRPL55-216ENST00000366744 LRP5O75197 1615 aa12.66□□□□□ -0.38
MRPL55-216ENST00000366744 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
MRPL55-216ENST00000366744 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
MRPL55-216ENST00000366744 NBPF14Q5TI25 921 aa12.65□□□□□ -0.38
MRPL55-216ENST00000366744 LY75O60449 1722 aa12.65□□□□□ -0.38
MRPL55-216ENST00000366744 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-216ENST00000366744 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
MRPL55-216ENST00000366744 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
MRPL55-216ENST00000366744 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
MRPL55-216ENST00000366744 NPC1L1Q9UHC9 1359 aa12.64□□□□□ -0.39
MRPL55-216ENST00000366744 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-216ENST00000366744 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
MRPL55-216ENST00000366744 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
MRPL55-216ENST00000366744 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
MRPL55-216ENST00000366744 PLSCR1O15162 318 aa12.62□□□□□ -0.39
MRPL55-216ENST00000366744 CNGB1Q14028 1251 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-216ENST00000366744 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
MRPL55-216ENST00000366744 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-216ENST00000366744 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
MRPL55-216ENST00000366744 IGSF1Q8N6C5 1336 aa12.61□□□□□ -0.39
MRPL55-216ENST00000366744 C5P01031 1676 aa12.61□□□□□ -0.39
MRPL55-216ENST00000366744 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-216ENST00000366744 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
MRPL55-216ENST00000366744 EYA1Q99502 592 aa12.6□□□□□ -0.39
MRPL55-216ENST00000366744 PAPPAQ13219 1627 aa12.59□□□□□ -0.39
MRPL55-216ENST00000366744 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
MRPL55-216ENST00000366744 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
MRPL55-216ENST00000366744 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-216ENST00000366744 KCNQ2O43526 872 aa12.58□□□□□ -0.4
MRPL55-216ENST00000366744 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
MRPL55-216ENST00000366744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
MRPL55-216ENST00000366744 CASZ1Q86V15 1759 aa12.58□□□□□ -0.4
MRPL55-216ENST00000366744 SCN11AQ9UI33 1791 aa12.58□□□□□ -0.4
MRPL55-216ENST00000366744 MTHFSP49914 203 aa12.57□□□□□ -0.4
MRPL55-216ENST00000366744 TXNRD1Q16881 649 aa12.57□□□□□ -0.4
MRPL55-216ENST00000366744 STK32BQ9NY57 414 aa12.57□□□□□ -0.4
MRPL55-216ENST00000366744 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
MRPL55-216ENST00000366744 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
MRPL55-216ENST00000366744 PTF1AQ7RTS3 328 aa12.56□□□□□ -0.4
MRPL55-216ENST00000366744 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
MRPL55-216ENST00000366744 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
MRPL55-216ENST00000366744 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
MRPL55-216ENST00000366744 PLEKHO1Q53GL0 409 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-216ENST00000366744 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
MRPL55-216ENST00000366744 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
MRPL55-216ENST00000366744 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
MRPL55-216ENST00000366744 KDRP35968 1356 aa12.55□□□□□ -0.4
MRPL55-216ENST00000366744 COL3A1P02461 1466 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-216ENST00000366744 CYP27B1O15528 508 aa12.54□□□□□ -0.4
MRPL55-216ENST00000366744 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
MRPL55-216ENST00000366744 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
MRPL55-216ENST00000366744 IL13P35225 146 aa12.53□□□□□ -0.4
MRPL55-216ENST00000366744 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-216ENST00000366744 MPRIPQ6WCQ1 1025 aa12.53□□□□□ -0.4
MRPL55-216ENST00000366744 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
MRPL55-216ENST00000366744 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
MRPL55-216ENST00000366744 PHKG2P15735 406 aa12.52□□□□□ -0.41
MRPL55-216ENST00000366744 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-216ENST00000366744 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-216ENST00000366744 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
MRPL55-216ENST00000366744 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
MRPL55-216ENST00000366744 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
MRPL55-216ENST00000366744 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
MRPL55-216ENST00000366744 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
MRPL55-216ENST00000366744 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-216ENST00000366744 SLC15A2Q16348 729 aa12.5□□□□□ -0.41
MRPL55-216ENST00000366744 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
MRPL55-216ENST00000366744 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-216ENST00000366744 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
MRPL55-216ENST00000366744 COL5A3P25940 1745 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-216ENST00000366744 HMOX1P09601 288 aa12.49□□□□□ -0.41
MRPL55-216ENST00000366744 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-216ENST00000366744 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
MRPL55-216ENST00000366744 PROM2Q8N271 834 aa12.48□□□□□ -0.41
MRPL55-216ENST00000366744 SPON1Q9HCB6 807 aa12.48□□□□□ -0.41
MRPL55-216ENST00000366744 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
MRPL55-216ENST00000366744 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-216ENST00000366744 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
MRPL55-216ENST00000366744 NEFMP07197 916 aa12.47□□□□□ -0.41
MRPL55-216ENST00000366744 TFCP2L1Q9NZI6 479 aa12.47□□□□□ -0.41
MRPL55-216ENST00000366744 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
MRPL55-216ENST00000366744 MRC1P22897 1456 aa12.46□□□□□ -0.41
MRPL55-216ENST00000366744 CABP4P57796 275 aa12.46□□□□□ -0.41
MRPL55-216ENST00000366744 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
MRPL55-216ENST00000366744 PIGBQ92521 554 aa12.46□□□□□ -0.41
MRPL55-216ENST00000366744 CICQ96RK0 1608 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-216ENST00000366744 SIPA1L3O60292 1781 aaPredicted RBP12.46□□□□□ -0.42
MRPL55-216ENST00000366744 DDX10Q13206 875 aaKnown RBP12.45□□□□□ -0.42
MRPL55-216ENST00000366744 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
MRPL55-216ENST00000366744 AK7Q96M32 723 aa12.45□□□□□ -0.42
MRPL55-216ENST00000366744 LRRC4BQ9NT99 713 aa12.45□□□□□ -0.42
MRPL55-216ENST00000366744 UBR2Q8IWV8 1755 aa12.45□□□□□ -0.42
MRPL55-216ENST00000366744 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
MRPL55-216ENST00000366744 U2AF1L5P0DN76 240 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms