RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MPNDQ8N594 471 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 CFAP44Q96MT7 982 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 ZHX1Q9UKY1 873 aaPredicted RBP24.12■■□□□ 1.45
TRIM58-201ENST00000366481 FOXO3O43524 673 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 BMP2KLQ5H9B9 411 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 SLC4A10Q6U841 1118 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 NECTIN2Q92692 538 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 KIF2CQ99661 725 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 CCDC61Q9Y6R9 512 aa24.12■■□□□ 1.45
TRIM58-201ENST00000366481 RBM27Q9P2N5 1060 aaKnown RBP24.11■■□□□ 1.45
TRIM58-201ENST00000366481 ZSCAN23Q3MJ62 389 aa24.11■■□□□ 1.45
TRIM58-201ENST00000366481 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
TRIM58-201ENST00000366481 RBSNQ9H1K0 784 aa24.1■■□□□ 1.45
TRIM58-201ENST00000366481 GSPT1P15170 499 aaKnown RBP24.1■■□□□ 1.45
TRIM58-201ENST00000366481 PRR36Q9H6K5 1346 aa24.09■■□□□ 1.45
TRIM58-201ENST00000366481 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
TRIM58-201ENST00000366481 GCC1Q96CN9 775 aa24.09■■□□□ 1.45
TRIM58-201ENST00000366481 ZNF853P0CG23 659 aa24.08■■□□□ 1.45
TRIM58-201ENST00000366481 EIF4A2Q14240 407 aaKnown RBP24.08■■□□□ 1.45
TRIM58-201ENST00000366481 F6X3S4 739 aa24.08■■□□□ 1.45
TRIM58-201ENST00000366481 PREX1Q8TCU6 1659 aa24.08■■□□□ 1.44
TRIM58-201ENST00000366481 TSHZ3Q63HK5 1081 aa24.07■■□□□ 1.44
TRIM58-201ENST00000366481 RBM33Q96EV2 1170 aaKnown RBP24.06■■□□□ 1.44
TRIM58-201ENST00000366481 MEIS3Q99687 375 aa24.06■■□□□ 1.44
TRIM58-201ENST00000366481 ABCC4O15439 1325 aa24.05■■□□□ 1.44
TRIM58-201ENST00000366481 NUTM2GQ5VZR2 741 aa24.05■■□□□ 1.44
TRIM58-201ENST00000366481 NOL7Q9UMY1 257 aaKnown RBP24.05■■□□□ 1.44
TRIM58-201ENST00000366481 API5Q9BZZ5 524 aaKnown RBP24.05■■□□□ 1.44
TRIM58-201ENST00000366481 CPS1P31327 1500 aa24.04■■□□□ 1.44
TRIM58-201ENST00000366481 SYCE3A1L190 88 aa24.04■■□□□ 1.44
TRIM58-201ENST00000366481 NUCB2P80303 420 aa24.04■■□□□ 1.44
TRIM58-201ENST00000366481 CSPP1Q1MSJ5 1256 aa24.04■■□□□ 1.44
TRIM58-201ENST00000366481 PLEKHM2Q8IWE5 1019 aa24.04■■□□□ 1.44
TRIM58-201ENST00000366481 A2ML1A8K2U0 1454 aa24.04■■□□□ 1.44
TRIM58-201ENST00000366481 PKP1Q13835 747 aa24.03■■□□□ 1.44
TRIM58-201ENST00000366481 FOXD4L6Q3SYB3 417 aaPredicted RBP24.03■■□□□ 1.44
TRIM58-201ENST00000366481 FOXD4L3Q6VB84 417 aaPredicted RBP24.03■■□□□ 1.44
TRIM58-201ENST00000366481 MED14O60244 1454 aa24.03■■□□□ 1.44
TRIM58-201ENST00000366481 MAP2P11137 1827 aaKnown RBP24.03■■□□□ 1.44
TRIM58-201ENST00000366481 SLC4A2P04920 1241 aa24.03■■□□□ 1.44
TRIM58-201ENST00000366481 CHAMP1Q96JM3 812 aa24.03■■□□□ 1.44
TRIM58-201ENST00000366481 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
TRIM58-201ENST00000366481 ARHGAP45Q92619 1136 aa24.02■■□□□ 1.44
TRIM58-201ENST00000366481 RICTORQ6R327 1708 aa24.02■■□□□ 1.44
TRIM58-201ENST00000366481 G2E3Q7L622 706 aa24.01■■□□□ 1.43
TRIM58-201ENST00000366481 PRDM4Q9UKN5 801 aa24.01■■□□□ 1.43
TRIM58-201ENST00000366481 ZKSCAN5Q9Y2L8 839 aa24.01■■□□□ 1.43
TRIM58-201ENST00000366481 CDC45O75419 566 aa24.01■■□□□ 1.43
TRIM58-201ENST00000366481 LMOD3Q0VAK6 560 aa24.01■■□□□ 1.43
TRIM58-201ENST00000366481 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
TRIM58-201ENST00000366481 ACEP12821 1306 aa24■■□□□ 1.43
TRIM58-201ENST00000366481 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
TRIM58-201ENST00000366481 TERF1P54274 439 aa23.99■■□□□ 1.43
TRIM58-201ENST00000366481 ZNF445P59923 1031 aa23.99■■□□□ 1.43
TRIM58-201ENST00000366481 BRPF1P55201 1214 aaPredicted RBP23.98■■□□□ 1.43
TRIM58-201ENST00000366481 CCDC39Q9UFE4 941 aa23.98■■□□□ 1.43
TRIM58-201ENST00000366481 LTV1Q96GA3 475 aaPredicted RBP23.98■■□□□ 1.43
TRIM58-201ENST00000366481 DYNC1I1O14576 645 aa23.97■■□□□ 1.43
TRIM58-201ENST00000366481 LMBRD1Q9NUN5 540 aa23.97■■□□□ 1.43
TRIM58-201ENST00000366481 MTERF4Q7Z6M4 381 aaKnown RBP23.97■■□□□ 1.43
TRIM58-201ENST00000366481 C14orf37Q86TY3 774 aa23.97■■□□□ 1.43
TRIM58-201ENST00000366481 CPSF1Q10570 1443 aaKnown RBP23.97■■□□□ 1.43
TRIM58-201ENST00000366481 PTCH1Q13635 1447 aa23.97■■□□□ 1.43
TRIM58-201ENST00000366481 PLCB2Q00722 1185 aa23.97■■□□□ 1.43
TRIM58-201ENST00000366481 NOL8Q76FK4 1167 aaKnown RBP23.97■■□□□ 1.43
TRIM58-201ENST00000366481 ZNF500O60304 480 aaPredicted RBP23.96■■□□□ 1.43
TRIM58-201ENST00000366481 SASS6Q6UVJ0 657 aa23.96■■□□□ 1.43
TRIM58-201ENST00000366481 TSC1Q92574 1164 aa23.96■■□□□ 1.43
TRIM58-201ENST00000366481 MSH6P52701 1360 aa23.96■■□□□ 1.43
TRIM58-201ENST00000366481 HS1BP3Q53T59 392 aa23.96■■□□□ 1.43
TRIM58-201ENST00000366481 CHMP4BQ9H444 224 aaKnown RBP23.96■■□□□ 1.43
TRIM58-201ENST00000366481 DCTPP1Q9H773 170 aa23.96■■□□□ 1.43
TRIM58-201ENST00000366481 TTC21BQ7Z4L5 1316 aa23.96■■□□□ 1.43
TRIM58-201ENST00000366481 ZGPATQ8N5A5 531 aaKnown RBP23.95■■□□□ 1.43
TRIM58-201ENST00000366481 RABEP1Q15276 862 aa23.95■■□□□ 1.42
TRIM58-201ENST00000366481 CEP85Q6P2H3 762 aa23.95■■□□□ 1.42
TRIM58-201ENST00000366481 EXOC6BQ9Y2D4 811 aa23.95■■□□□ 1.42
TRIM58-201ENST00000366481 ATP7BP35670 1465 aa23.95■■□□□ 1.42
TRIM58-201ENST00000366481 SDSP20132 328 aa23.95■■□□□ 1.42
TRIM58-201ENST00000366481 ROBO2Q9HCK4 1378 aa23.95■■□□□ 1.42
TRIM58-201ENST00000366481 TTC22Q5TAA0 569 aa23.94■■□□□ 1.42
TRIM58-201ENST00000366481 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
TRIM58-201ENST00000366481 ST18O60284 1047 aa23.93■■□□□ 1.42
TRIM58-201ENST00000366481 JARID2Q92833 1246 aaPredicted RBP23.93■■□□□ 1.42
TRIM58-201ENST00000366481 MTHFSDQ2M296 383 aaKnown RBP23.92■■□□□ 1.42
TRIM58-201ENST00000366481 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.92■■□□□ 1.42
TRIM58-201ENST00000366481 KIF20BQ96Q89 1820 aa23.92■■□□□ 1.42
TRIM58-201ENST00000366481 CBX1P83916 185 aa23.92■■□□□ 1.42
TRIM58-201ENST00000366481 FAM177BA6PVY3 158 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 LTKP29376 864 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 CHL1O00533 1208 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 ANKRD44Q8N8A2 993 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 KIAA2012Q0VF49 1180 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 SMAP1Q8IYB5 467 aaPredicted RBP23.91■■□□□ 1.42
TRIM58-201ENST00000366481 GPT2Q8TD30 523 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 ZNF830Q96NB3 372 aaPredicted RBP23.91■■□□□ 1.42
TRIM58-201ENST00000366481 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
TRIM58-201ENST00000366481 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.9■■□□□ 1.42
TRIM58-201ENST00000366481 RTF1Q92541 710 aaKnown RBP23.9■■□□□ 1.42
TRIM58-201ENST00000366481 MAP3K19Q56UN5 1328 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms