RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 PCDHGA11Q9Y5H2 935 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 ATG7O95352 703 aa8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 GTF2IP78347 998 aa8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 KIAA1024Q9UPX6 916 aa8.18□□□□□ -1.1
RNU6-560P-201ENST00000364007 TIMP2P16035 220 aa8.17□□□□□ -1.1
RNU6-560P-201ENST00000364007 PTK7Q13308 1070 aa8.17□□□□□ -1.1
RNU6-560P-201ENST00000364007 LARP1Q6PKG0 1096 aaKnown RBP8.17□□□□□ -1.1
RNU6-560P-201ENST00000364007 HOMEZQ8IX15 550 aa8.17□□□□□ -1.1
RNU6-560P-201ENST00000364007 SIRT1Q96EB6 747 aa8.17□□□□□ -1.1
RNU6-560P-201ENST00000364007 ZNF594Q96JF6 807 aaPredicted RBP8.17□□□□□ -1.1
RNU6-560P-201ENST00000364007 CARNS1A5YM72 827 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 FAM196BA6NMK8 535 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L10C9JJH3 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L12C9JPN9 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L21D6R901 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 GFRA3O60609 400 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 TRIM50Q86XT4 487 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 RETREG2Q8NC44 543 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 ESF1Q9H501 851 aaKnown RBP8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 DNAAF2Q9NVR5 837 aaKnown RBP8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
RNU6-560P-201ENST00000364007 FAM187AA6NFU0 413 aa8.15□□□□□ -1.1
RNU6-560P-201ENST00000364007 DKK1O94907 266 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 ATP1A2P50993 1020 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 PSME1Q06323 249 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 DPYDQ12882 1025 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 CCDC102BQ68D86 513 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 LARGE2Q8N3Y3 721 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 KDF1Q8NAX2 398 aaPredicted RBP8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 AGBL1Q96MI9 1066 aa8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
RNU6-560P-201ENST00000364007 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
RNU6-560P-201ENST00000364007 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
RNU6-560P-201ENST00000364007 STK32AQ8WU08 396 aa8.13□□□□□ -1.11
RNU6-560P-201ENST00000364007 SFI1A8K8P3 1242 aa8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 TMEM229AB2RXF0 380 aa8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 Q6ZVU0 165 aa8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 RAB6BQ9NRW1 208 aa8.12□□□□□ -1.11
RNU6-560P-201ENST00000364007 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
RNU6-560P-201ENST00000364007 ADH1AP07327 375 aa8.11□□□□□ -1.11
RNU6-560P-201ENST00000364007 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
RNU6-560P-201ENST00000364007 RELBQ01201 579 aa8.11□□□□□ -1.11
RNU6-560P-201ENST00000364007 SIX5Q8N196 739 aa8.11□□□□□ -1.11
RNU6-560P-201ENST00000364007 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
RNU6-560P-201ENST00000364007 TMEM88BA6NKF7 163 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 NRG2O14511 850 aaPredicted RBP8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 LGR5O75473 907 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 AVPP01185 164 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 SCNN1DP51172 638 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 CYP2U1Q7Z449 544 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 ETNK1Q9HBU6 452 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
RNU6-560P-201ENST00000364007 GNRH1P01148 92 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 PTGIRP43119 386 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 GDF10P55107 478 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 PKDCCQ504Y2 493 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 MEIOBQ8N635 442 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 ZNF358Q9NW07 568 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 SERTAD1Q9UHV2 236 aa8.09□□□□□ -1.11
RNU6-560P-201ENST00000364007 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
RNU6-560P-201ENST00000364007 DGAT1O75907 488 aa8.08□□□□□ -1.12
RNU6-560P-201ENST00000364007 SEC13P55735 322 aa8.08□□□□□ -1.12
RNU6-560P-201ENST00000364007 FAM69CQ0P6D2 419 aa8.08□□□□□ -1.12
RNU6-560P-201ENST00000364007 IL2RAP01589 272 aa8.07□□□□□ -1.12
RNU6-560P-201ENST00000364007 INHAP05111 366 aa8.07□□□□□ -1.12
RNU6-560P-201ENST00000364007 SLAIN2Q9P270 581 aa8.07□□□□□ -1.12
RNU6-560P-201ENST00000364007 RBM19Q9Y4C8 960 aaKnown RBP8.07□□□□□ -1.12
RNU6-560P-201ENST00000364007 TSEN2Q8NCE0 465 aaKnown RBP8.06□□□□□ -1.12
RNU6-560P-201ENST00000364007 CNKSR1Q969H4 720 aa8.06□□□□□ -1.12
RNU6-560P-201ENST00000364007 XAGE2Q96GT9 111 aa8.06□□□□□ -1.12
RNU6-560P-201ENST00000364007 MEN1O00255 615 aa8.05□□□□□ -1.12
RNU6-560P-201ENST00000364007 TNS4Q8IZW8 715 aa8.05□□□□□ -1.12
RNU6-560P-201ENST00000364007 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
RNU6-560P-201ENST00000364007 HINFPQ9BQA5 517 aa8.05□□□□□ -1.12
RNU6-560P-201ENST00000364007 IRX2Q9BZI1 471 aaPredicted RBP8.05□□□□□ -1.12
RNU6-560P-201ENST00000364007 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 AXIN1O15169 862 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 ST8SIA5O15466 376 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 BMP1P13497 986 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms