RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 COL26A1Q96A83 441 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 CCDC85AQ96PX6 553 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 NUDT12Q9BQG2 462 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 PPP1R1BQ9UD71 204 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 VPS9D1Q9Y2B5 631 aa5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 DNMT3AQ9Y6K1 912 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1249P-201ENST00000363237 CADPSQ9ULU8 1353 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 WEE1P30291 646 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 PSME1Q06323 249 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 MSS51Q4VC12 460 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 LRCH3Q96II8 777 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 BACH2Q9BYV9 841 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 PCDHGA11Q9Y5H2 935 aa5.59□□□□□ -1.51
RNU6-1249P-201ENST00000363237 BHMG1C9JSJ3 638 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1249P-201ENST00000363237 FAM13AO94988 1023 aa5.58□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MRPL58Q14197 206 aaKnown RBP5.58□□□□□ -1.52
RNU6-1249P-201ENST00000363237 RBCK1Q9BYM8 510 aa5.58□□□□□ -1.52
RNU6-1249P-201ENST00000363237 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1249P-201ENST00000363237 SEPT3Q9UH03 358 aa5.58□□□□□ -1.52
RNU6-1249P-201ENST00000363237 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 NPR3P17342 541 aa5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 NCLP19338 710 aaKnown RBP5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PBX2P40425 430 aa5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 DMRTA1Q5VZB9 504 aa5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 SH3BP5LQ7L8J4 393 aa5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 HELQQ8TDG4 1101 aa5.57□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PPM1GO15355 546 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 GIGYF1O75420 1035 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MMP16P51512 607 aa5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 HDLBPQ00341 1268 aaKnown RBP5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 FKBP5Q13451 457 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 CITED4Q96RK1 184 aa5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MKNK1Q9BUB5 465 aa5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PLA2G2EQ9NZK7 142 aa5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PCDHB3Q9Y5E6 796 aa5.56□□□□□ -1.52
RNU6-1249P-201ENST00000363237 FOXO3O43524 673 aa5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 NDUFB5O43674 189 aa5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PPP4CP60510 307 aa5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 XPCQ01831 940 aaPredicted RBP5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 SH3RF1Q7Z6J0 888 aa5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 SEPT12Q8IYM1 358 aa5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MRPL50Q8N5N7 158 aaKnown RBP5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PIK3R5Q8WYR1 880 aa5.55□□□□□ -1.52
RNU6-1249P-201ENST00000363237 TREHO43280 583 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 P4HBP07237 508 aaKnown RBP5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 IGFBP4P22692 258 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 FMR1Q06787 632 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MTMR3Q13615 1198 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 NBPF20Q3BBV1 942 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 POTEEQ6S8J3 1075 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 TMC7Q7Z402 723 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 TMEM87AQ8NBN3 555 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 SPSB2Q99619 263 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MAGEB6P1A0A0J9YX57 407 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 TK2O00142 265 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 PLCB3Q01970 1234 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 BPHLQ86WA6 291 aaPredicted RBP5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 FAM160A2Q8N612 972 aaPredicted RBP5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 SLC43A3Q8NBI5 491 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 TSEN2Q8NCE0 465 aaKnown RBP5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 GAS2L2Q8NHY3 880 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 DMRTB1Q96MA1 342 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 MRS2Q9HD23 443 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 CDV3Q9UKY7 258 aaKnown RBP5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 BRPF3Q9ULD4 1205 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 AXIN2Q9Y2T1 843 aa5.53□□□□□ -1.52
RNU6-1249P-201ENST00000363237 ERBB3P21860 1342 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 PRPF40AO75400 957 aaKnown RBP5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 LGR5O75473 907 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 MYCP01106 439 aaPredicted RBP5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 APLP1P51693 650 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 RAD51AP2Q09MP3 1159 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 NAA30Q147X3 362 aaPredicted RBP5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 ERFEQ4G0M1 354 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 LDLRAD1Q5T700 205 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 ALKBH2Q6NS38 261 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 CAPN12Q6ZSI9 719 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 DPH6Q7L8W6 267 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 TMC4Q7Z404 712 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 TMC1Q8TDI8 760 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 SLC10A4Q96EP9 437 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 CARD14Q9BXL6 1004 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 TANGO6Q9C0B7 1094 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 PCDHB11Q9Y5F2 797 aa5.52□□□□□ -1.53
RNU6-1249P-201ENST00000363237 ESPNB1AK53 854 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 SORBS3O60504 671 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 LDHBP07195 334 aaKnown RBP5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 DSC3Q14574 896 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 AGERQ15109 404 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 C9orf131Q5VYM1 1079 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 NOP9Q86U38 636 aaKnown RBP5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 NT5DC4Q86YG4 428 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 ANKRD13AQ8IZ07 590 aa5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU6-1249P-201ENST00000363237 RNF34Q969K3 372 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms