RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 KIAA1024Q9UPX6 916 aa6.59□□□□□ -1.35
RNU6-28P-201ENST00000362378 RGS22Q8NE09 1264 aa6.58□□□□□ -1.36
RNU6-28P-201ENST00000362378 ZNF594Q96JF6 807 aaPredicted RBP6.58□□□□□ -1.36
RNU6-28P-201ENST00000362378 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
RNU6-28P-201ENST00000362378 PCDHB11Q9Y5F2 797 aa6.58□□□□□ -1.36
RNU6-28P-201ENST00000362378 SEC13P55735 322 aa6.57□□□□□ -1.36
RNU6-28P-201ENST00000362378 CCDC102BQ68D86 513 aa6.57□□□□□ -1.36
RNU6-28P-201ENST00000362378 PPP1R18Q6NYC8 613 aa6.57□□□□□ -1.36
RNU6-28P-201ENST00000362378 MPNDQ8N594 471 aa6.57□□□□□ -1.36
RNU6-28P-201ENST00000362378 CCER1Q8TC90 406 aaPredicted RBP6.57□□□□□ -1.36
RNU6-28P-201ENST00000362378 CD2BP2O95400 341 aaKnown RBP6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 ARID4AP29374 1257 aaPredicted RBP6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 INTS6LQ5JSJ4 861 aaKnown RBP6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 SND1Q7KZF4 910 aaKnown RBP eCLIP6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 NPM2Q86SE8 214 aaKnown RBP6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 C1orf216Q8TAB5 229 aa6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 CDK15Q96Q40 435 aa6.56□□□□□ -1.36
RNU6-28P-201ENST00000362378 ATP2B4P23634 1241 aa6.55□□□□□ -1.36
RNU6-28P-201ENST00000362378 VASH1Q7L8A9 365 aaPredicted RBP6.55□□□□□ -1.36
RNU6-28P-201ENST00000362378 TPCN2Q8NHX9 752 aa6.55□□□□□ -1.36
RNU6-28P-201ENST00000362378 RBM19Q9Y4C8 960 aaKnown RBP6.55□□□□□ -1.36
RNU6-28P-201ENST00000362378 M0R2N6 131 aa6.54□□□□□ -1.36
RNU6-28P-201ENST00000362378 ERVH48-1M5A8F1 160 aa6.54□□□□□ -1.36
RNU6-28P-201ENST00000362378 MYCP01106 439 aaPredicted RBP6.54□□□□□ -1.36
RNU6-28P-201ENST00000362378 ERVK-9P63128 1117 aa6.54□□□□□ -1.36
RNU6-28P-201ENST00000362378 RC3H1Q5TC82 1133 aaKnown RBP6.54□□□□□ -1.36
RNU6-28P-201ENST00000362378 EHBP1Q8NDI1 1231 aa6.54□□□□□ -1.36
RNU6-28P-201ENST00000362378 SFI1A8K8P3 1242 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 SIAH2O43255 324 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 GRM5P41594 1212 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 PSME1Q06323 249 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 OCLNQ16625 522 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 TRIM52Q96A61 297 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
RNU6-28P-201ENST00000362378 A0A0G2JS52 829 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 SCTRP47872 440 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 RAB15P59190 212 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 DHX9Q08211 1270 aaKnown RBP6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 CCDC27Q2M243 656 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 LIAT1Q6ZQX7 453 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 TAS1R3Q7RTX0 852 aa6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 EMID1Q96A84 441 aaPredicted RBP6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 CXXC1Q9P0U4 656 aaPredicted RBP6.52□□□□□ -1.37
RNU6-28P-201ENST00000362378 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 WNT7AO00755 349 aa6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 PRMT3O60678 531 aa6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 RANGAP1P46060 587 aaPredicted RBP6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 ARID5BQ14865 1188 aa6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 PRIMPOLQ96LW4 560 aa6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 ZNF358Q9NW07 568 aa6.5□□□□□ -1.37
RNU6-28P-201ENST00000362378 SOWAHDA6NJG2 315 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 TMEM229AB2RXF0 380 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 ADH1CP00326 375 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 FSHRP23945 695 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 WEE1P30291 646 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 NR5A1Q13285 461 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 LAPTM4AQ15012 233 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 HINFPQ9BQA5 517 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 ESF1Q9H501 851 aaKnown RBP6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 TMPRSS4Q9NRS4 437 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 TLL2Q9Y6L7 1015 aa6.49□□□□□ -1.37
RNU6-28P-201ENST00000362378 LILRA1O75019 489 aa6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 SERPINB4P48594 390 aa6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 SCNN1DP51172 638 aa6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 CCDC116Q8IYX3 515 aa6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 TSEN2Q8NCE0 465 aaKnown RBP6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 EGFL7Q9UHF1 273 aa6.48□□□□□ -1.37
RNU6-28P-201ENST00000362378 SCNN1AP37088 669 aa6.47□□□□□ -1.37
RNU6-28P-201ENST00000362378 SLC19A1P41440 591 aa6.47□□□□□ -1.37
RNU6-28P-201ENST00000362378 PPP1R26Q5T8A7 1209 aaPredicted RBP6.47□□□□□ -1.37
RNU6-28P-201ENST00000362378 CYLDQ9NQC7 956 aa6.47□□□□□ -1.37
RNU6-28P-201ENST00000362378 BACH1O14867 736 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 INHAP05111 366 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 IGFBP4P22692 258 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 GDF10P55107 478 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 MYT1Q01538 1121 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 FOXD4L4Q8WXT5 416 aaPredicted RBP6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 COL26A1Q96A83 441 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 MRGPRX2Q96LB1 330 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 SLC4A9Q96Q91 983 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 AMOTL2Q9Y2J4 779 aa6.46□□□□□ -1.38
RNU6-28P-201ENST00000362378 LCE2BO14633 110 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 GNRH1P01148 92 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 NR3C2P08235 984 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 EPHA4P54764 986 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 FKBP5Q13451 457 aaPredicted RBP6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 SPRYD7Q5W111 196 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 GAS2L2Q8NHY3 880 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 ETNK1Q9HBU6 452 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 EMILIN1Q9Y6C2 1016 aa6.45□□□□□ -1.38
RNU6-28P-201ENST00000362378 FOXO3O43524 673 aa6.44□□□□□ -1.38
RNU6-28P-201ENST00000362378 PTCD1O75127 700 aaKnown RBP6.44□□□□□ -1.38
RNU6-28P-201ENST00000362378 LGR5O75473 907 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms