RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 FCHSD2O94868 740 aa27.33■■□□□ 1.97
SHISA4-201ENST00000362011 RUNDC1Q96C34 613 aa27.33■■□□□ 1.97
SHISA4-201ENST00000362011 EYA1Q99502 592 aa27.33■■□□□ 1.97
SHISA4-201ENST00000362011 ERBB3P21860 1342 aa27.32■■□□□ 1.96
SHISA4-201ENST00000362011 HMOX1P09601 288 aa27.32■■□□□ 1.96
SHISA4-201ENST00000362011 RSPH6AQ9H0K4 717 aa27.32■■□□□ 1.96
SHISA4-201ENST00000362011 LARP1Q6PKG0 1096 aaKnown RBP27.31■■□□□ 1.96
SHISA4-201ENST00000362011 COL5A2P05997 1499 aaPredicted RBP27.31■■□□□ 1.96
SHISA4-201ENST00000362011 EVA1CP58658 441 aa27.3■■□□□ 1.96
SHISA4-201ENST00000362011 SULT6B1Q6IMI4 303 aa27.3■■□□□ 1.96
SHISA4-201ENST00000362011 RREB1Q92766 1687 aa27.3■■□□□ 1.96
SHISA4-201ENST00000362011 APBA3O96018 575 aa27.29■■□□□ 1.96
SHISA4-201ENST00000362011 TCP11L2Q8N4U5 519 aa27.29■■□□□ 1.96
SHISA4-201ENST00000362011 THRAP3Q9Y2W1 955 aaKnown RBP27.29■■□□□ 1.96
SHISA4-201ENST00000362011 KDRP35968 1356 aa27.29■■□□□ 1.96
SHISA4-201ENST00000362011 NCAPD2Q15021 1401 aa27.28■■□□□ 1.96
SHISA4-201ENST00000362011 NEFMP07197 916 aa27.28■■□□□ 1.96
SHISA4-201ENST00000362011 USP35Q9P2H5 1018 aa27.28■■□□□ 1.96
SHISA4-201ENST00000362011 MAPK8IP3Q9UPT6 1336 aa27.28■■□□□ 1.96
SHISA4-201ENST00000362011 PRKAR2BP31323 418 aa27.27■■□□□ 1.96
SHISA4-201ENST00000362011 PDE3BQ13370 1112 aa27.27■■□□□ 1.96
SHISA4-201ENST00000362011 PLEKHF1Q96S99 279 aa27.27■■□□□ 1.96
SHISA4-201ENST00000362011 NBPF6Q5VWK0 638 aa27.26■■□□□ 1.95
SHISA4-201ENST00000362011 AEBP1Q8IUX7 1158 aa27.26■■□□□ 1.95
SHISA4-201ENST00000362011 NBPF4Q96M43 638 aa27.26■■□□□ 1.95
SHISA4-201ENST00000362011 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
SHISA4-201ENST00000362011 WNK3Q9BYP7 1800 aa27.25■■□□□ 1.95
SHISA4-201ENST00000362011 CSB-PGBD3P0DP91 1061 aa27.25■■□□□ 1.95
SHISA4-201ENST00000362011 PARP4Q9UKK3 1724 aaKnown RBP27.25■■□□□ 1.95
SHISA4-201ENST00000362011 APAF1O14727 1248 aa27.24■■□□□ 1.95
SHISA4-201ENST00000362011 NUP188Q5SRE5 1749 aa27.23■■□□□ 1.95
SHISA4-201ENST00000362011 ZBED9Q6R2W3 1325 aa27.23■■□□□ 1.95
SHISA4-201ENST00000362011 WDR17Q8IZU2 1322 aa27.23■■□□□ 1.95
SHISA4-201ENST00000362011 USHBP1Q8N6Y0 703 aa27.22■■□□□ 1.95
SHISA4-201ENST00000362011 SENP3-EIF4A1A0A087X0R7 540 aa27.21■■□□□ 1.95
SHISA4-201ENST00000362011 NGEFQ8N5V2 710 aa27.2■■□□□ 1.95
SHISA4-201ENST00000362011 NLRP2Q9NX02 1062 aa27.2■■□□□ 1.95
SHISA4-201ENST00000362011 CRB1P82279 1406 aa27.19■■□□□ 1.94
SHISA4-201ENST00000362011 PKD1L3Q7Z443 1732 aa27.18■■□□□ 1.94
SHISA4-201ENST00000362011 SALL2Q9Y467 1007 aaPredicted RBP27.17■■□□□ 1.94
SHISA4-201ENST00000362011 TOM1L2Q6ZVM7 507 aa27.16■■□□□ 1.94
SHISA4-201ENST00000362011 TMPOP42166 694 aaKnown RBP27.16■■□□□ 1.94
SHISA4-201ENST00000362011 NBPF14Q5TI25 921 aa27.16■■□□□ 1.94
SHISA4-201ENST00000362011 PHACTR3Q96KR7 559 aa27.16■■□□□ 1.94
SHISA4-201ENST00000362011 NCBP3Q53F19 620 aaKnown RBP27.15■■□□□ 1.94
SHISA4-201ENST00000362011 RRP7AQ9Y3A4 280 aaKnown RBP27.15■■□□□ 1.94
SHISA4-201ENST00000362011 NFE2L2Q16236 605 aa27.14■■□□□ 1.93
SHISA4-201ENST00000362011 OVOS2A0A0G2JMS6 1433 aa27.13■■□□□ 1.93
SHISA4-201ENST00000362011 NEUROD2Q15784 382 aa27.13■■□□□ 1.93
SHISA4-201ENST00000362011 CARD10Q9BWT7 1032 aa27.13■■□□□ 1.93
SHISA4-201ENST00000362011 RGPD3A6NKT7 1758 aaPredicted RBP27.12■■□□□ 1.93
SHISA4-201ENST00000362011 RGPD4Q7Z3J3 1758 aa27.12■■□□□ 1.93
SHISA4-201ENST00000362011 PLEKHG2Q9H7P9 1386 aa27.11■■□□□ 1.93
SHISA4-201ENST00000362011 LRRC37A3O60309 1634 aa27.1■■□□□ 1.93
SHISA4-201ENST00000362011 PLSCR1O15162 318 aa27.1■■□□□ 1.93
SHISA4-201ENST00000362011 RAPGEF4Q8WZA2 1011 aa27.1■■□□□ 1.93
SHISA4-201ENST00000362011 MEGF6O75095 1541 aa27.1■■□□□ 1.93
SHISA4-201ENST00000362011 SHANK3Q9BYB0 1731 aa27.09■■□□□ 1.93
SHISA4-201ENST00000362011 CENPBP07199 599 aaPredicted RBP27.09■■□□□ 1.93
SHISA4-201ENST00000362011 RIPK4P57078 832 aa27.09■■□□□ 1.93
SHISA4-201ENST00000362011 CCDC27Q2M243 656 aa27.09■■□□□ 1.93
SHISA4-201ENST00000362011 GAS2L2Q8NHY3 880 aa27.09■■□□□ 1.93
SHISA4-201ENST00000362011 BCL9O00512 1426 aa27.09■■□□□ 1.93
SHISA4-201ENST00000362011 SBF2Q86WG5 1849 aa27.08■■□□□ 1.93
SHISA4-201ENST00000362011 TATP17735 454 aaPredicted RBP27.08■■□□□ 1.93
SHISA4-201ENST00000362011 MTHFSDQ2M296 383 aaKnown RBP27.07■■□□□ 1.92
SHISA4-201ENST00000362011 ZNF521Q96K83 1311 aa27.07■■□□□ 1.92
SHISA4-201ENST00000362011 PLEKHO1Q53GL0 409 aaPredicted RBP27.06■■□□□ 1.92
SHISA4-201ENST00000362011 LMOD3Q0VAK6 560 aa27.05■■□□□ 1.92
SHISA4-201ENST00000362011 DDB1Q16531 1140 aa27.05■■□□□ 1.92
SHISA4-201ENST00000362011 AMOTQ4VCS5 1084 aa27.05■■□□□ 1.92
SHISA4-201ENST00000362011 WWC1Q8IX03 1113 aa27.05■■□□□ 1.92
SHISA4-201ENST00000362011 SCN11AQ9UI33 1791 aa27.04■■□□□ 1.92
SHISA4-201ENST00000362011 KCNQ2O43526 872 aa27.04■■□□□ 1.92
SHISA4-201ENST00000362011 SPON1Q9HCB6 807 aa27.04■■□□□ 1.92
SHISA4-201ENST00000362011 BCL11BQ9C0K0 894 aaPredicted RBP27.03■■□□□ 1.92
SHISA4-201ENST00000362011 TRIM35Q9UPQ4 493 aa27.03■■□□□ 1.92
SHISA4-201ENST00000362011 CDCA7Q9BWT1 371 aaPredicted RBP27.02■■□□□ 1.92
SHISA4-201ENST00000362011 IL2RBP14784 551 aa27.01■■□□□ 1.91
SHISA4-201ENST00000362011 PTF1AQ7RTS3 328 aa27■■□□□ 1.91
SHISA4-201ENST00000362011 WDR63Q8IWG1 891 aa27■■□□□ 1.91
SHISA4-201ENST00000362011 MARCH10Q8NA82 808 aaPredicted RBP27■■□□□ 1.91
SHISA4-201ENST00000362011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27■■□□□ 1.91
SHISA4-201ENST00000362011 MAP3K5Q99683 1374 aa27■■□□□ 1.91
SHISA4-201ENST00000362011 GOLGA2Q08379 1002 aa26.99■■□□□ 1.91
SHISA4-201ENST00000362011 ZNF530Q6P9A1 599 aaPredicted RBP26.99■■□□□ 1.91
SHISA4-201ENST00000362011 PROM2Q8N271 834 aa26.99■■□□□ 1.91
SHISA4-201ENST00000362011 ADAMTS7Q9UKP4 1686 aa26.99■■□□□ 1.91
SHISA4-201ENST00000362011 SPG7Q9UQ90 795 aa26.99■■□□□ 1.91
SHISA4-201ENST00000362011 CASZ1Q86V15 1759 aa26.98■■□□□ 1.91
SHISA4-201ENST00000362011 ANO8Q9HCE9 1232 aaPredicted RBP26.98■■□□□ 1.91
SHISA4-201ENST00000362011 GNAT3A8MTJ3 354 aa26.97■■□□□ 1.91
SHISA4-201ENST00000362011 SIPA1L3O60292 1781 aaPredicted RBP26.96■■□□□ 1.91
SHISA4-201ENST00000362011 HTATSF1O43719 755 aaKnown RBP26.96■■□□□ 1.91
SHISA4-201ENST00000362011 RTF1Q92541 710 aaKnown RBP26.96■■□□□ 1.91
SHISA4-201ENST00000362011 AKAP4Q5JQC9 854 aa26.95■■□□□ 1.91
SHISA4-201ENST00000362011 C1orf141Q5JVX7 400 aa26.95■■□□□ 1.91
SHISA4-201ENST00000362011 CALD1Q05682 793 aaKnown RBP26.94■■□□□ 1.9
SHISA4-201ENST00000362011 IL16Q14005 1332 aa26.94■■□□□ 1.9
SHISA4-201ENST00000362011 CDCA7LQ96GN5 454 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms