RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 NEFHP12036 1026 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 RDXP35241 583 aaKnown RBP20.22■□□□□ 0.83
COL4A2-201ENST00000360467 ATF7IPQ6VMQ6 1270 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 TNMDQ9H2S6 317 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 DHX8Q14562 1220 aaKnown RBP20.21■□□□□ 0.83
COL4A2-201ENST00000360467 RABEP1Q15276 862 aa20.21■□□□□ 0.83
COL4A2-201ENST00000360467 HSP90B2PQ58FF3 399 aa20.21■□□□□ 0.83
COL4A2-201ENST00000360467 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
COL4A2-201ENST00000360467 TRMT1LQ7Z2T5 733 aaKnown RBP20.21■□□□□ 0.83
COL4A2-201ENST00000360467 NME9Q86XW9 330 aa20.21■□□□□ 0.83
COL4A2-201ENST00000360467 NOL7Q9UMY1 257 aaKnown RBP20.21■□□□□ 0.83
COL4A2-201ENST00000360467 HECW1Q76N89 1606 aa20.21■□□□□ 0.83
COL4A2-201ENST00000360467 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
COL4A2-201ENST00000360467 PDCP20941 246 aa20.2■□□□□ 0.83
COL4A2-201ENST00000360467 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.83
COL4A2-201ENST00000360467 WWC3Q9ULE0 1092 aa20.2■□□□□ 0.83
COL4A2-201ENST00000360467 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
COL4A2-201ENST00000360467 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
COL4A2-201ENST00000360467 DUSP27Q5VZP5 1158 aa20.2■□□□□ 0.82
COL4A2-201ENST00000360467 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
COL4A2-201ENST00000360467 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
COL4A2-201ENST00000360467 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
COL4A2-201ENST00000360467 BLOC1S2Q6QNY1 142 aa20.2■□□□□ 0.82
COL4A2-201ENST00000360467 ACBD3Q9H3P7 528 aa20.19■□□□□ 0.82
COL4A2-201ENST00000360467 CAVIN4Q5BKX8 364 aa20.19■□□□□ 0.82
COL4A2-201ENST00000360467 LETM1O95202 739 aaPredicted RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 SSR1P43307 286 aaKnown RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 CASTP20810 708 aaKnown RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 STIM1Q13586 685 aa20.19■□□□□ 0.82
COL4A2-201ENST00000360467 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 FBXO31Q5XUX0 539 aaPredicted RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
COL4A2-201ENST00000360467 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
COL4A2-201ENST00000360467 ZNHIT6Q9NWK9 470 aaKnown RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 ANKRD1Q15327 319 aa20.19■□□□□ 0.82
COL4A2-201ENST00000360467 DZIP1Q86YF9 867 aaKnown RBP20.19■□□□□ 0.82
COL4A2-201ENST00000360467 BOLA2Q9H3K6 86 aa20.18■□□□□ 0.82
COL4A2-201ENST00000360467 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
COL4A2-201ENST00000360467 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
COL4A2-201ENST00000360467 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
COL4A2-201ENST00000360467 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
COL4A2-201ENST00000360467 AAMPQ13685 434 aa20.17■□□□□ 0.82
COL4A2-201ENST00000360467 TRMT112Q9UI30 125 aaKnown RBP20.17■□□□□ 0.82
COL4A2-201ENST00000360467 LIG1P18858 919 aa20.17■□□□□ 0.82
COL4A2-201ENST00000360467 JMYQ8N9B5 988 aa20.17■□□□□ 0.82
COL4A2-201ENST00000360467 MYO6Q9UM54 1294 aa20.17■□□□□ 0.82
COL4A2-201ENST00000360467 IMMTQ16891 758 aaKnown RBP20.17■□□□□ 0.82
COL4A2-201ENST00000360467 KCNH5Q8NCM2 988 aa20.17■□□□□ 0.82
COL4A2-201ENST00000360467 PLEKHH2Q8IVE3 1493 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 GRM1Q13255 1194 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 NFE2L2Q16236 605 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 HFM1A2PYH4 1435 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 F6X3S4 739 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 NEBLO76041 1014 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 CCDC96Q2M329 555 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 JARID2Q92833 1246 aaPredicted RBP20.16■□□□□ 0.82
COL4A2-201ENST00000360467 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
COL4A2-201ENST00000360467 DAPK1P53355 1430 aa20.15■□□□□ 0.82
COL4A2-201ENST00000360467 SPATA32Q96LK8 384 aa20.15■□□□□ 0.82
COL4A2-201ENST00000360467 CCDC8Q9H0W5 538 aaPredicted RBP20.15■□□□□ 0.82
COL4A2-201ENST00000360467 AEBP1Q8IUX7 1158 aa20.15■□□□□ 0.82
COL4A2-201ENST00000360467 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
COL4A2-201ENST00000360467 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
COL4A2-201ENST00000360467 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
COL4A2-201ENST00000360467 MCM2P49736 904 aa20.15■□□□□ 0.82
COL4A2-201ENST00000360467 PPM1FP49593 454 aaPredicted RBP20.14■□□□□ 0.82
COL4A2-201ENST00000360467 ZBTB3Q9H5J0 574 aa20.14■□□□□ 0.82
COL4A2-201ENST00000360467 ECM2O94769 699 aaPredicted RBP20.14■□□□□ 0.81
COL4A2-201ENST00000360467 CCDC181Q5TID7 509 aa20.14■□□□□ 0.81
COL4A2-201ENST00000360467 CAMK4Q16566 473 aa20.14■□□□□ 0.81
COL4A2-201ENST00000360467 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
COL4A2-201ENST00000360467 CEP57L1Q8IYX8 460 aa20.14■□□□□ 0.81
COL4A2-201ENST00000360467 CCDC184Q52MB2 194 aa20.14■□□□□ 0.81
COL4A2-201ENST00000360467 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
COL4A2-201ENST00000360467 GUCY1B3Q02153 619 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 ZNF622Q969S3 477 aaKnown RBP eCLIP20.13■□□□□ 0.81
COL4A2-201ENST00000360467 UBA5Q9GZZ9 404 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 K7ELQ4 463 aaPredicted RBP20.13■□□□□ 0.81
COL4A2-201ENST00000360467 AXDND1Q5T1B0 1012 aaPredicted RBP20.13■□□□□ 0.81
COL4A2-201ENST00000360467 MAP7D2Q96T17 732 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 CENPHQ9H3R5 247 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 ATAD2Q6PL18 1390 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 CDKL5O76039 1030 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
COL4A2-201ENST00000360467 SUPT6HQ7KZ85 1726 aaKnown RBP20.12■□□□□ 0.81
COL4A2-201ENST00000360467 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 LARP6Q9BRS8 491 aaKnown RBP20.12■□□□□ 0.81
COL4A2-201ENST00000360467 IFIT1P09914 478 aaKnown RBP20.12■□□□□ 0.81
COL4A2-201ENST00000360467 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 FAM193AP78312 1265 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 BMP2KQ9NSY1 1161 aaPredicted RBP20.12■□□□□ 0.81
COL4A2-201ENST00000360467 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
COL4A2-201ENST00000360467 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms