RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 RRP12Q5JTH9 1297 aaKnown RBP21.52■■□□□ 1.04
TNPO2-201ENST00000356861 KDM5BQ9UGL1 1544 aa21.52■■□□□ 1.04
TNPO2-201ENST00000356861 KDM4AO75164 1064 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
TNPO2-201ENST00000356861 SMARCA5O60264 1052 aaPredicted RBP21.51■■□□□ 1.03
TNPO2-201ENST00000356861 KRT32Q14532 448 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 MNS1Q8NEH6 495 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 IL27Q8NEV9 243 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 NUP160Q12769 1436 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 MEX3CQ5U5Q3 659 aaKnown RBP21.51■■□□□ 1.03
TNPO2-201ENST00000356861 JMYQ8N9B5 988 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 IL16Q14005 1332 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 ANKRD36BQ8N2N9 1353 aa21.51■■□□□ 1.03
TNPO2-201ENST00000356861 TCEAL9Q9UHQ7 104 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 PRAG1Q86YV5 1406 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 PLCH2O75038 1416 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 FMNL2Q96PY5 1086 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 AMOTL2Q9Y2J4 779 aa21.5■■□□□ 1.03
TNPO2-201ENST00000356861 TCOF1Q13428 1488 aaKnown RBP21.5■■□□□ 1.03
TNPO2-201ENST00000356861 F6X3S4 739 aa21.49■■□□□ 1.03
TNPO2-201ENST00000356861 GNL3LQ9NVN8 582 aaKnown RBP21.49■■□□□ 1.03
TNPO2-201ENST00000356861 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
TNPO2-201ENST00000356861 PDIA4P13667 645 aaKnown RBP21.48■■□□□ 1.03
TNPO2-201ENST00000356861 FKBP4Q02790 459 aaKnown RBP eCLIP21.48■■□□□ 1.03
TNPO2-201ENST00000356861 NACAP1Q9BZK3 213 aa21.48■■□□□ 1.03
TNPO2-201ENST00000356861 AMOTQ4VCS5 1084 aa21.48■■□□□ 1.03
TNPO2-201ENST00000356861 TNMDQ9H2S6 317 aa21.48■■□□□ 1.03
TNPO2-201ENST00000356861 PTPRCP08575 1304 aa21.48■■□□□ 1.03
TNPO2-201ENST00000356861 CTDP1Q9Y5B0 961 aaPredicted RBP21.48■■□□□ 1.03
TNPO2-201ENST00000356861 SLC3A2P08195 630 aaKnown RBP21.48■■□□□ 1.03
TNPO2-201ENST00000356861 ZSCAN25Q6NSZ9 544 aa21.48■■□□□ 1.03
TNPO2-201ENST00000356861 ME1P48163 572 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 TBC1D2Q9BYX2 928 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 CTNNA3Q9UI47 895 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 DUOX2Q9NRD8 1548 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 LARP1Q6PKG0 1096 aaKnown RBP21.47■■□□□ 1.03
TNPO2-201ENST00000356861 PDILTQ8N807 584 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 UPF3BQ9BZI7 483 aaKnown RBP21.47■■□□□ 1.03
TNPO2-201ENST00000356861 ARGLU1Q9NWB6 273 aaPredicted RBP21.47■■□□□ 1.03
TNPO2-201ENST00000356861 PHF8Q9UPP1 1060 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 TTC21BQ7Z4L5 1316 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 IGHDP01880 384 aa21.47■■□□□ 1.03
TNPO2-201ENST00000356861 SMC2O95347 1197 aa21.46■■□□□ 1.03
TNPO2-201ENST00000356861 MTMR7Q9Y216 660 aa21.46■■□□□ 1.03
TNPO2-201ENST00000356861 TRIM22Q8IYM9 498 aa21.46■■□□□ 1.03
TNPO2-201ENST00000356861 MPHOSPH8Q99549 860 aa21.46■■□□□ 1.03
TNPO2-201ENST00000356861 BMP2KLQ5H9B9 411 aa21.45■■□□□ 1.02
TNPO2-201ENST00000356861 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
TNPO2-201ENST00000356861 ASXL1Q8IXJ9 1541 aa21.45■■□□□ 1.02
TNPO2-201ENST00000356861 CASTP20810 708 aaKnown RBP21.45■■□□□ 1.02
TNPO2-201ENST00000356861 HMGN5P82970 282 aaKnown RBP21.45■■□□□ 1.02
TNPO2-201ENST00000356861 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
TNPO2-201ENST00000356861 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
TNPO2-201ENST00000356861 MBIPQ9NS73 344 aa21.44■■□□□ 1.02
TNPO2-201ENST00000356861 FLIIQ13045 1269 aa21.44■■□□□ 1.02
TNPO2-201ENST00000356861 ZNF771Q7L3S4 317 aaPredicted RBP21.44■■□□□ 1.02
TNPO2-201ENST00000356861 SPATA32Q96LK8 384 aa21.44■■□□□ 1.02
TNPO2-201ENST00000356861 DNAAF4Q8WXU2 420 aa21.43■■□□□ 1.02
TNPO2-201ENST00000356861 MAP7D2Q96T17 732 aa21.43■■□□□ 1.02
TNPO2-201ENST00000356861 CFAP45Q9UL16 551 aa21.43■■□□□ 1.02
TNPO2-201ENST00000356861 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
TNPO2-201ENST00000356861 TESK2Q96S53 571 aa21.43■■□□□ 1.02
TNPO2-201ENST00000356861 SPC24Q8NBT2 197 aa21.43■■□□□ 1.02
TNPO2-201ENST00000356861 SYCP2Q9BX26 1530 aa21.42■■□□□ 1.02
TNPO2-201ENST00000356861 TEX35Q5T0J7 233 aa21.42■■□□□ 1.02
TNPO2-201ENST00000356861 TXLNAP40222 546 aa21.41■■□□□ 1.02
TNPO2-201ENST00000356861 DBF4Q9UBU7 674 aaPredicted RBP21.41■■□□□ 1.02
TNPO2-201ENST00000356861 CCDC43Q96MW1 224 aaKnown RBP21.4■■□□□ 1.02
TNPO2-201ENST00000356861 ESPNB1AK53 854 aa21.4■■□□□ 1.02
TNPO2-201ENST00000356861 FOXO3O43524 673 aa21.4■■□□□ 1.02
TNPO2-201ENST00000356861 FILIP1LQ4L180 1135 aa21.4■■□□□ 1.02
TNPO2-201ENST00000356861 ARHGAP45Q92619 1136 aa21.4■■□□□ 1.02
TNPO2-201ENST00000356861 NUP62CLQ9H1M0 184 aa21.4■■□□□ 1.02
TNPO2-201ENST00000356861 FAM83GA6ND36 823 aa21.39■■□□□ 1.02
TNPO2-201ENST00000356861 CDKL5O76039 1030 aa21.39■■□□□ 1.02
TNPO2-201ENST00000356861 HDAC1Q13547 482 aaPredicted RBP21.39■■□□□ 1.02
TNPO2-201ENST00000356861 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.02
TNPO2-201ENST00000356861 MPRIPQ6WCQ1 1025 aa21.39■■□□□ 1.02
TNPO2-201ENST00000356861 CCDC69A6NI79 296 aa21.39■■□□□ 1.02
TNPO2-201ENST00000356861 CTTNBP2Q8WZ74 1663 aa21.39■■□□□ 1.01
TNPO2-201ENST00000356861 TBC1D9Q6ZT07 1266 aa21.39■■□□□ 1.01
TNPO2-201ENST00000356861 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
TNPO2-201ENST00000356861 BOLA2Q9H3K6 86 aa21.38■■□□□ 1.01
TNPO2-201ENST00000356861 ACEP12821 1306 aa21.38■■□□□ 1.01
TNPO2-201ENST00000356861 CEBPAP49715 358 aaPredicted RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 CCP110O43303 1012 aa21.37■■□□□ 1.01
TNPO2-201ENST00000356861 PTCD1O75127 700 aaKnown RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 STARD3NLO95772 234 aa21.37■■□□□ 1.01
TNPO2-201ENST00000356861 NAP1L1P55209 391 aaKnown RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 DHX8Q14562 1220 aaKnown RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
TNPO2-201ENST00000356861 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
TNPO2-201ENST00000356861 POLR3AO14802 1390 aaPredicted RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
TNPO2-201ENST00000356861 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 CCDC85AQ96PX6 553 aaPredicted RBP21.37■■□□□ 1.01
TNPO2-201ENST00000356861 MYD88Q99836 296 aa21.37■■□□□ 1.01
TNPO2-201ENST00000356861 MPNDQ8N594 471 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms