RNA–Protein interactions for RNA: ENST00000355396.7

SUSD1-201, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene SUSD1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-201ENST00000355396 U2AF1L5P0DN76 240 aaPredicted RBP15.43■□□□□ 0.06
SUSD1-201ENST00000355396 U2AF1Q01081 240 aaKnown RBP eCLIP15.43■□□□□ 0.06
SUSD1-201ENST00000355396 TNS2Q63HR2 1409 aa15.42■□□□□ 0.06
SUSD1-201ENST00000355396 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
SUSD1-201ENST00000355396 ADAMTS8Q9UP79 889 aa15.42■□□□□ 0.06
SUSD1-201ENST00000355396 RXRBP28702 533 aa15.41■□□□□ 0.06
SUSD1-201ENST00000355396 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
SUSD1-201ENST00000355396 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
SUSD1-201ENST00000355396 RAPGEF4Q8WZA2 1011 aa15.41■□□□□ 0.06
SUSD1-201ENST00000355396 HMOX1P09601 288 aa15.4■□□□□ 0.06
SUSD1-201ENST00000355396 TATP17735 454 aaPredicted RBP15.4■□□□□ 0.06
SUSD1-201ENST00000355396 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
SUSD1-201ENST00000355396 FAM98CQ17RN3 349 aaKnown RBP15.39■□□□□ 0.05
SUSD1-201ENST00000355396 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
SUSD1-201ENST00000355396 RGS12O14924 1447 aa15.39■□□□□ 0.05
SUSD1-201ENST00000355396 ADAMTS7Q9UKP4 1686 aa15.39■□□□□ 0.05
SUSD1-201ENST00000355396 SOCS7O14512 581 aa15.38■□□□□ 0.05
SUSD1-201ENST00000355396 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
SUSD1-201ENST00000355396 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
SUSD1-201ENST00000355396 BCL9O00512 1426 aa15.38■□□□□ 0.05
SUSD1-201ENST00000355396 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
SUSD1-201ENST00000355396 PLEKHO1Q53GL0 409 aaPredicted RBP15.37■□□□□ 0.05
SUSD1-201ENST00000355396 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
SUSD1-201ENST00000355396 ZCRB1Q8TBF4 217 aaKnown RBP15.37■□□□□ 0.05
SUSD1-201ENST00000355396 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
SUSD1-201ENST00000355396 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
SUSD1-201ENST00000355396 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
SUSD1-201ENST00000355396 EXOC5O00471 708 aa15.35■□□□□ 0.05
SUSD1-201ENST00000355396 DDB1Q16531 1140 aa15.35■□□□□ 0.05
SUSD1-201ENST00000355396 PCDH11XQ9BZA7 1347 aa15.35■□□□□ 0.05
SUSD1-201ENST00000355396 PCDH11YQ9BZA8 1340 aa15.35■□□□□ 0.05
SUSD1-201ENST00000355396 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
SUSD1-201ENST00000355396 MTHFSDQ2M296 383 aaKnown RBP15.34■□□□□ 0.05
SUSD1-201ENST00000355396 GAS2L2Q8NHY3 880 aa15.34■□□□□ 0.05
SUSD1-201ENST00000355396 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.05
SUSD1-201ENST00000355396 CYP27B1O15528 508 aa15.33■□□□□ 0.04
SUSD1-201ENST00000355396 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
SUSD1-201ENST00000355396 PHKG2P15735 406 aa15.32■□□□□ 0.04
SUSD1-201ENST00000355396 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
SUSD1-201ENST00000355396 SCN11AQ9UI33 1791 aa15.32■□□□□ 0.04
SUSD1-201ENST00000355396 HTATSF1O43719 755 aaKnown RBP15.31■□□□□ 0.04
SUSD1-201ENST00000355396 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
SUSD1-201ENST00000355396 IFNL2Q8IZJ0 200 aa15.31■□□□□ 0.04
SUSD1-201ENST00000355396 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
SUSD1-201ENST00000355396 MARCH10Q8NA82 808 aaPredicted RBP15.31■□□□□ 0.04
SUSD1-201ENST00000355396 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
SUSD1-201ENST00000355396 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
SUSD1-201ENST00000355396 NEFMP07197 916 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 TOGARAM1Q9Y4F4 1720 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
SUSD1-201ENST00000355396 NGEFQ8N5V2 710 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 MRC1P22897 1456 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 MAP3K5Q99683 1374 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 TMPOP42166 694 aaKnown RBP15.3■□□□□ 0.04
SUSD1-201ENST00000355396 KRT27Q7Z3Y8 459 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
SUSD1-201ENST00000355396 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
SUSD1-201ENST00000355396 SBF2Q86WG5 1849 aa15.29■□□□□ 0.04
SUSD1-201ENST00000355396 PDE3BQ13370 1112 aa15.29■□□□□ 0.04
SUSD1-201ENST00000355396 CEMIPQ8WUJ3 1361 aa15.29■□□□□ 0.04
SUSD1-201ENST00000355396 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
SUSD1-201ENST00000355396 SIPA1L3O60292 1781 aaPredicted RBP15.28■□□□□ 0.04
SUSD1-201ENST00000355396 CCDC27Q2M243 656 aa15.28■□□□□ 0.04
SUSD1-201ENST00000355396 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
SUSD1-201ENST00000355396 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
SUSD1-201ENST00000355396 DCAF5Q96JK2 942 aa15.27■□□□□ 0.04
SUSD1-201ENST00000355396 DOT1LQ8TEK3 1739 aa15.27■□□□□ 0.04
SUSD1-201ENST00000355396 APAF1O14727 1248 aa15.27■□□□□ 0.03
SUSD1-201ENST00000355396 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.03
SUSD1-201ENST00000355396 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
SUSD1-201ENST00000355396 ITGB4P16144 1822 aa15.25■□□□□ 0.03
SUSD1-201ENST00000355396 A0A0G2JS52 829 aa15.25■□□□□ 0.03
SUSD1-201ENST00000355396 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
SUSD1-201ENST00000355396 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
SUSD1-201ENST00000355396 FAM196AQ6ZSG2 479 aa15.25■□□□□ 0.03
SUSD1-201ENST00000355396 ERVV-2B6SEH9 535 aa15.24■□□□□ 0.03
SUSD1-201ENST00000355396 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
SUSD1-201ENST00000355396 RIPK4P57078 832 aa15.24■□□□□ 0.03
SUSD1-201ENST00000355396 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
SUSD1-201ENST00000355396 PAPPAQ13219 1627 aa15.23■□□□□ 0.03
SUSD1-201ENST00000355396 GTF3C3Q9Y5Q9 886 aa15.22■□□□□ 0.03
SUSD1-201ENST00000355396 ZNF521Q96K83 1311 aa15.22■□□□□ 0.03
SUSD1-201ENST00000355396 MPRIPQ6WCQ1 1025 aa15.22■□□□□ 0.03
SUSD1-201ENST00000355396 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
SUSD1-201ENST00000355396 TNS1Q9HBL0 1735 aaKnown RBP15.21■□□□□ 0.02
SUSD1-201ENST00000355396 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
SUSD1-201ENST00000355396 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
SUSD1-201ENST00000355396 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
SUSD1-201ENST00000355396 WWC1Q8IX03 1113 aa15.19■□□□□ 0.02
SUSD1-201ENST00000355396 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
SUSD1-201ENST00000355396 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
SUSD1-201ENST00000355396 BABAM1Q9NWV8 329 aa15.19■□□□□ 0.02
SUSD1-201ENST00000355396 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
SUSD1-201ENST00000355396 BTAF1O14981 1849 aa15.19■□□□□ 0.02
SUSD1-201ENST00000355396 MCM10Q7L590 875 aa15.18■□□□□ 0.02
SUSD1-201ENST00000355396 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
SUSD1-201ENST00000355396 IL16Q14005 1332 aa15.18■□□□□ 0.02
SUSD1-201ENST00000355396 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
SUSD1-201ENST00000355396 ZNF831Q5JPB2 1677 aa15.18■□□□□ 0.02
SUSD1-201ENST00000355396 FAM182BQ5T319 152 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms