RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 ABCC4O15439 1325 aa19.71■□□□□ 0.75
MBD1-205ENST00000353909 NPHP4O75161 1426 aaPredicted RBP19.71■□□□□ 0.75
MBD1-205ENST00000353909 VIRMAQ69YN4 1812 aaKnown RBP19.7■□□□□ 0.74
MBD1-205ENST00000353909 ADGRL3Q9HAR2 1447 aa19.69■□□□□ 0.74
MBD1-205ENST00000353909 PSME1Q06323 249 aa19.69■□□□□ 0.74
MBD1-205ENST00000353909 NWD1Q149M9 1564 aa19.68■□□□□ 0.74
MBD1-205ENST00000353909 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
MBD1-205ENST00000353909 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
MBD1-205ENST00000353909 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
MBD1-205ENST00000353909 DDRGK1Q96HY6 314 aa19.66■□□□□ 0.74
MBD1-205ENST00000353909 TSPYL4Q9UJ04 414 aa19.66■□□□□ 0.74
MBD1-205ENST00000353909 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
MBD1-205ENST00000353909 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
MBD1-205ENST00000353909 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.73
MBD1-205ENST00000353909 KIAA0232Q92628 1395 aa19.64■□□□□ 0.73
MBD1-205ENST00000353909 RGS12O14924 1447 aa19.64■□□□□ 0.73
MBD1-205ENST00000353909 LTN1O94822 1766 aa19.64■□□□□ 0.73
MBD1-205ENST00000353909 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
MBD1-205ENST00000353909 SLC4A2P04920 1241 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 NUCB1Q02818 461 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 KIF24Q5T7B8 1368 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 G2E3Q7L622 706 aa19.62■□□□□ 0.73
MBD1-205ENST00000353909 GNAT3A8MTJ3 354 aa19.61■□□□□ 0.73
MBD1-205ENST00000353909 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
MBD1-205ENST00000353909 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
MBD1-205ENST00000353909 IP6K1Q92551 441 aa19.61■□□□□ 0.73
MBD1-205ENST00000353909 NFAT5O94916 1531 aa19.61■□□□□ 0.73
MBD1-205ENST00000353909 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
MBD1-205ENST00000353909 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
MBD1-205ENST00000353909 ANKRD45Q5TZF3 282 aa19.59■□□□□ 0.73
MBD1-205ENST00000353909 MSH6P52701 1360 aa19.59■□□□□ 0.73
MBD1-205ENST00000353909 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
MBD1-205ENST00000353909 NECTIN2Q92692 538 aa19.59■□□□□ 0.73
MBD1-205ENST00000353909 F6X3S4 739 aa19.58■□□□□ 0.72
MBD1-205ENST00000353909 GCP02774 474 aa19.57■□□□□ 0.72
MBD1-205ENST00000353909 RGPD2P0DJD1 1756 aa19.57■□□□□ 0.72
MBD1-205ENST00000353909 RTL1A6NKG5 1358 aa19.56■□□□□ 0.72
MBD1-205ENST00000353909 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
MBD1-205ENST00000353909 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
MBD1-205ENST00000353909 HAP1P54257 671 aaPredicted RBP19.56■□□□□ 0.72
MBD1-205ENST00000353909 CHMP4BQ9H444 224 aaKnown RBP19.56■□□□□ 0.72
MBD1-205ENST00000353909 MEIS3Q99687 375 aa19.55■□□□□ 0.72
MBD1-205ENST00000353909 DAXXQ9UER7 740 aaPredicted RBP19.55■□□□□ 0.72
MBD1-205ENST00000353909 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
MBD1-205ENST00000353909 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
MBD1-205ENST00000353909 KCNH5Q8NCM2 988 aa19.54■□□□□ 0.72
MBD1-205ENST00000353909 SLC4A10Q6U841 1118 aa19.54■□□□□ 0.72
MBD1-205ENST00000353909 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
MBD1-205ENST00000353909 TBC1D32Q96NH3 1257 aa19.54■□□□□ 0.72
MBD1-205ENST00000353909 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
MBD1-205ENST00000353909 PTPRCP08575 1304 aa19.53■□□□□ 0.72
MBD1-205ENST00000353909 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
MBD1-205ENST00000353909 MFAP1P55081 439 aaKnown RBP19.52■□□□□ 0.72
MBD1-205ENST00000353909 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.72
MBD1-205ENST00000353909 ARHGEF25Q86VW2 580 aa19.52■□□□□ 0.72
MBD1-205ENST00000353909 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
MBD1-205ENST00000353909 ATP10DQ9P241 1426 aa19.52■□□□□ 0.71
MBD1-205ENST00000353909 TAF7Q15545 349 aaPredicted RBP19.52■□□□□ 0.71
MBD1-205ENST00000353909 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
MBD1-205ENST00000353909 C1orf167Q5SNV9 1468 aa19.51■□□□□ 0.71
MBD1-205ENST00000353909 UPF2Q9HAU5 1272 aaKnown RBP19.51■□□□□ 0.71
MBD1-205ENST00000353909 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
MBD1-205ENST00000353909 HSPA2P54652 639 aa19.49■□□□□ 0.71
MBD1-205ENST00000353909 C16orf71Q8IYS4 520 aaPredicted RBP19.48■□□□□ 0.71
MBD1-205ENST00000353909 ANKRD44Q8N8A2 993 aa19.48■□□□□ 0.71
MBD1-205ENST00000353909 STK31Q9BXU1 1019 aa19.48■□□□□ 0.71
MBD1-205ENST00000353909 DCTPP1Q9H773 170 aa19.48■□□□□ 0.71
MBD1-205ENST00000353909 APBB1O00213 710 aa19.47■□□□□ 0.71
MBD1-205ENST00000353909 KCNQ3O43525 872 aa19.47■□□□□ 0.71
MBD1-205ENST00000353909 ZC3H6P61129 1189 aaKnown RBP19.47■□□□□ 0.71
MBD1-205ENST00000353909 FLIIQ13045 1269 aa19.47■□□□□ 0.71
MBD1-205ENST00000353909 MPRIPQ6WCQ1 1025 aa19.47■□□□□ 0.71
MBD1-205ENST00000353909 TMEM94Q12767 1356 aa19.47■□□□□ 0.71
MBD1-205ENST00000353909 FKBP5Q13451 457 aaPredicted RBP19.47■□□□□ 0.71
MBD1-205ENST00000353909 ANKRD24Q8TF21 1146 aa19.47■□□□□ 0.71
MBD1-205ENST00000353909 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
MBD1-205ENST00000353909 TRPM3Q9HCF6 1732 aaPredicted RBP19.46■□□□□ 0.71
MBD1-205ENST00000353909 CCDC30Q5VVM6 783 aa19.46■□□□□ 0.71
MBD1-205ENST00000353909 STRCP1A6NGW2 1772 aa19.46■□□□□ 0.71
MBD1-205ENST00000353909 ZNF530Q6P9A1 599 aaPredicted RBP19.46■□□□□ 0.71
MBD1-205ENST00000353909 C22orf23Q9BZE7 217 aa19.46■□□□□ 0.71
MBD1-205ENST00000353909 BMP2KLQ5H9B9 411 aa19.45■□□□□ 0.7
MBD1-205ENST00000353909 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
MBD1-205ENST00000353909 OTUD7AQ8TE49 926 aaPredicted RBP19.45■□□□□ 0.7
MBD1-205ENST00000353909 SLIT3O75094 1523 aa19.45■□□□□ 0.7
MBD1-205ENST00000353909 PXDNQ92626 1479 aa19.44■□□□□ 0.7
MBD1-205ENST00000353909 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
MBD1-205ENST00000353909 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
MBD1-205ENST00000353909 RPAP2Q8IXW5 612 aaPredicted RBP19.44■□□□□ 0.7
MBD1-205ENST00000353909 PHAXQ9H814 394 aaKnown RBP19.44■□□□□ 0.7
MBD1-205ENST00000353909 FAM208AQ9UK61 1670 aaKnown RBP19.44■□□□□ 0.7
MBD1-205ENST00000353909 ATF3P18847 181 aa19.43■□□□□ 0.7
MBD1-205ENST00000353909 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
MBD1-205ENST00000353909 RGPD5Q99666 1765 aa19.43■□□□□ 0.7
MBD1-205ENST00000353909 HDGFL1Q5TGJ6 251 aa19.43■□□□□ 0.7
MBD1-205ENST00000353909 PLEKHM2Q8IWE5 1019 aa19.43■□□□□ 0.7
MBD1-205ENST00000353909 CABLES1Q8TDN4 633 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms