RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 ANKRD20A12PQ8NF67 263 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 SPG7Q9UQ90 795 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 MCM3P25205 808 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 TMX1Q9H3N1 280 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 SF3A1Q15459 793 aaKnown RBP9.08□□□□□ -0.96
LIN28B-201ENST00000345080 INTS3Q68E01 1043 aaKnown RBP9.08□□□□□ -0.96
LIN28B-201ENST00000345080 POLA1P09884 1462 aaPredicted RBP9.08□□□□□ -0.96
LIN28B-201ENST00000345080 CCDC171Q6TFL3 1326 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 PLEKHH1Q9ULM0 1364 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 KIF1CO43896 1103 aaKnown RBP9.07□□□□□ -0.96
LIN28B-201ENST00000345080 UGGT2Q9NYU1 1516 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 WWC2Q6AWC2 1192 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 RASSF8Q8NHQ8 419 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 ERBINQ96RT1 1412 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 KIAA0586Q9BVV6 1533 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 CDC45O75419 566 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 JAKMIP3Q5VZ66 844 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
LIN28B-201ENST00000345080 WDR7Q9Y4E6 1490 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 ADAMTS2O95450 1211 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 CAGE1Q8TC20 777 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 YY1AP1Q9H869 796 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 CTTNBP2Q8WZ74 1663 aa9.07□□□□□ -0.96
LIN28B-201ENST00000345080 FMNL3Q8IVF7 1028 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 WDR63Q8IWG1 891 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 C9orf84Q5VXU9 1444 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 SPC24Q8NBT2 197 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 PLIN1O60240 522 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 TUBB4BP68371 445 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
LIN28B-201ENST00000345080 ARHGEF6Q15052 776 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 DDX58O95786 925 aaKnown RBP9.06□□□□□ -0.96
LIN28B-201ENST00000345080 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 UBXN4Q92575 508 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 PPP1R9BQ96SB3 815 aa9.06□□□□□ -0.96
LIN28B-201ENST00000345080 LRRC59Q96AG4 307 aaKnown RBP9.06□□□□□ -0.96
LIN28B-201ENST00000345080 ARHGEF12Q9NZN5 1544 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 SMTNL1A8MU46 457 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 PRPF40AO75400 957 aaKnown RBP9.05□□□□□ -0.96
LIN28B-201ENST00000345080 RNF187Q5TA31 235 aaPredicted RBP9.05□□□□□ -0.96
LIN28B-201ENST00000345080 CCDC146Q8IYE0 955 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 SYCP1Q15431 976 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 TAX1BP1Q86VP1 789 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 ITSN2Q9NZM3 1697 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 SEPT6Q14141 434 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 ZMYM3Q14202 1370 aa9.05□□□□□ -0.96
LIN28B-201ENST00000345080 LRSAM1Q6UWE0 723 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 TRIM5Q9C035 493 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
LIN28B-201ENST00000345080 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
LIN28B-201ENST00000345080 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 RPGRIP1LQ68CZ1 1315 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 NUP160Q12769 1436 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 APAF1O14727 1248 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 PPP2R1AP30153 589 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 PTPN14Q15678 1187 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 KCNH5Q8NCM2 988 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 NUP133Q8WUM0 1156 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 GCC1Q96CN9 775 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 CLEC11AQ9Y240 323 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 COG6Q9Y2V7 657 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 ATP6V1AP38606 617 aa9.04□□□□□ -0.96
LIN28B-201ENST00000345080 TTLL12Q14166 644 aaPredicted RBP9.04□□□□□ -0.96
LIN28B-201ENST00000345080 A0A087WZG4 1122 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ZPR1O75312 459 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 RXRBP28702 533 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 LUZP1Q86V48 1076 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 DRC1Q96MC2 740 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 WDR33Q9C0J8 1336 aaKnown RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 EIF2AK4Q9P2K8 1649 aaKnown RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 PLEKHO1Q53GL0 409 aaPredicted RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 C8orf37Q96NL8 207 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ADGRL1O94910 1474 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 NKTRP30414 1462 aaKnown RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 TNRQ92752 1358 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 A0A1B0GUA9 196 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 FSD2A1L4K1 749 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ERC1Q8IUD2 1116 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 MAP9Q49MG5 647 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 CCDC183Q5T5S1 534 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ABTB2Q8N961 1025 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 TBC1D32Q96NH3 1257 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 ANKRD62A6NC57 917 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 CAVIN2O95810 425 aa9.03□□□□□ -0.96
LIN28B-201ENST00000345080 GIGYF2Q6Y7W6 1299 aaKnown RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 TNPO1Q92973 898 aaKnown RBP9.03□□□□□ -0.96
LIN28B-201ENST00000345080 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms