RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.09■■□□□ 1.93
CLDND1-201ENST00000341181 SPATA31A1Q5TZJ5 1347 aa27.09■■□□□ 1.93
CLDND1-201ENST00000341181 PARP4Q9UKK3 1724 aaKnown RBP27.09■■□□□ 1.93
CLDND1-201ENST00000341181 TATP17735 454 aaPredicted RBP27.08■■□□□ 1.93
CLDND1-201ENST00000341181 THUMPD2Q9BTF0 503 aaKnown RBP27.08■■□□□ 1.93
CLDND1-201ENST00000341181 SPATA31A5Q5VU36 1347 aa27.08■■□□□ 1.92
CLDND1-201ENST00000341181 SPATA31A7Q8IWB4 1347 aa27.08■■□□□ 1.92
CLDND1-201ENST00000341181 PKD1L3Q7Z443 1732 aa27.08■■□□□ 1.92
CLDND1-201ENST00000341181 CDCA7LQ96GN5 454 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 CCDC9Q9Y3X0 531 aaKnown RBP27.07■■□□□ 1.92
CLDND1-201ENST00000341181 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 WNK3Q9BYP7 1800 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 IL2RBP14784 551 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 DCTN1Q14203 1278 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 CCDC27Q2M243 656 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 GAS2L2Q8NHY3 880 aa27.07■■□□□ 1.92
CLDND1-201ENST00000341181 SPINK5Q9NQ38 1064 aaPredicted RBP27.05■■□□□ 1.92
CLDND1-201ENST00000341181 ZNF530Q6P9A1 599 aaPredicted RBP27.05■■□□□ 1.92
CLDND1-201ENST00000341181 VPS72Q15906 364 aa27.04■■□□□ 1.92
CLDND1-201ENST00000341181 PLEKHO1Q53GL0 409 aaPredicted RBP27.04■■□□□ 1.92
CLDND1-201ENST00000341181 NGEFQ8N5V2 710 aa27.04■■□□□ 1.92
CLDND1-201ENST00000341181 SHANK3Q9BYB0 1731 aa27.03■■□□□ 1.92
CLDND1-201ENST00000341181 AMOTQ4VCS5 1084 aa27.03■■□□□ 1.92
CLDND1-201ENST00000341181 MCM10Q7L590 875 aa27.03■■□□□ 1.92
CLDND1-201ENST00000341181 MAP3K5Q99683 1374 aa27.03■■□□□ 1.92
CLDND1-201ENST00000341181 NCBP3Q53F19 620 aaKnown RBP27.02■■□□□ 1.92
CLDND1-201ENST00000341181 PLEKHG2Q9H7P9 1386 aa27■■□□□ 1.91
CLDND1-201ENST00000341181 CYP27B1O15528 508 aa26.99■■□□□ 1.91
CLDND1-201ENST00000341181 GLI3P10071 1580 aa26.99■■□□□ 1.91
CLDND1-201ENST00000341181 GNAT3A8MTJ3 354 aa26.99■■□□□ 1.91
CLDND1-201ENST00000341181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.99■■□□□ 1.91
CLDND1-201ENST00000341181 ATRNO75882 1429 aa26.99■■□□□ 1.91
CLDND1-201ENST00000341181 GOLGA2Q08379 1002 aa26.98■■□□□ 1.91
CLDND1-201ENST00000341181 SPG7Q9UQ90 795 aa26.98■■□□□ 1.91
CLDND1-201ENST00000341181 THRAP3Q9Y2W1 955 aaKnown RBP26.98■■□□□ 1.91
CLDND1-201ENST00000341181 FAM98CQ17RN3 349 aaKnown RBP26.97■■□□□ 1.91
CLDND1-201ENST00000341181 AKAP4Q5JQC9 854 aa26.97■■□□□ 1.91
CLDND1-201ENST00000341181 ZCRB1Q8TBF4 217 aaKnown RBP26.97■■□□□ 1.91
CLDND1-201ENST00000341181 EP400Q96L91 3159 aa26.97■■□□□ 1.91
CLDND1-201ENST00000341181 LRRC37A3O60309 1634 aa26.97■■□□□ 1.91
CLDND1-201ENST00000341181 LMOD3Q0VAK6 560 aa26.97■■□□□ 1.91
CLDND1-201ENST00000341181 PHKG2P15735 406 aa26.96■■□□□ 1.91
CLDND1-201ENST00000341181 C1orf141Q5JVX7 400 aa26.96■■□□□ 1.91
CLDND1-201ENST00000341181 MPRIPQ6WCQ1 1025 aa26.95■■□□□ 1.91
CLDND1-201ENST00000341181 IL17REQ8NFR9 667 aa26.95■■□□□ 1.91
CLDND1-201ENST00000341181 WDR63Q8IWG1 891 aa26.95■■□□□ 1.9
CLDND1-201ENST00000341181 RTF1Q92541 710 aaKnown RBP26.95■■□□□ 1.9
CLDND1-201ENST00000341181 LGR6Q9HBX8 967 aa26.95■■□□□ 1.9
CLDND1-201ENST00000341181 BARGINQ6ZT62 677 aa26.94■■□□□ 1.9
CLDND1-201ENST00000341181 PCDH11XQ9BZA7 1347 aa26.94■■□□□ 1.9
CLDND1-201ENST00000341181 PCDH11YQ9BZA8 1340 aa26.94■■□□□ 1.9
CLDND1-201ENST00000341181 KDM6AO15550 1401 aaPredicted RBP26.94■■□□□ 1.9
CLDND1-201ENST00000341181 TNS2Q63HR2 1409 aa26.93■■□□□ 1.9
CLDND1-201ENST00000341181 VIRMAQ69YN4 1812 aaKnown RBP26.93■■□□□ 1.9
CLDND1-201ENST00000341181 SLFN5Q08AF3 891 aa26.93■■□□□ 1.9
CLDND1-201ENST00000341181 PDE3BQ13370 1112 aa26.93■■□□□ 1.9
CLDND1-201ENST00000341181 DDX54Q8TDD1 881 aaKnown RBP26.92■■□□□ 1.9
CLDND1-201ENST00000341181 GJD4Q96KN9 370 aaPredicted RBP26.92■■□□□ 1.9
CLDND1-201ENST00000341181 TRPC5Q9UL62 973 aaPredicted RBP26.92■■□□□ 1.9
CLDND1-201ENST00000341181 CEMIPQ8WUJ3 1361 aa26.92■■□□□ 1.9
CLDND1-201ENST00000341181 IFNL2Q8IZJ0 200 aa26.92■■□□□ 1.9
CLDND1-201ENST00000341181 ADAMTS7Q9UKP4 1686 aa26.92■■□□□ 1.9
CLDND1-201ENST00000341181 QTRT2Q9H974 415 aaKnown RBP26.91■■□□□ 1.9
CLDND1-201ENST00000341181 DUSP27Q5VZP5 1158 aa26.91■■□□□ 1.9
CLDND1-201ENST00000341181 TSR2Q969E8 191 aaKnown RBP26.91■■□□□ 1.9
CLDND1-201ENST00000341181 HTATSF1O43719 755 aaKnown RBP26.9■■□□□ 1.9
CLDND1-201ENST00000341181 THSD7AQ9UPZ6 1657 aa26.9■■□□□ 1.9
CLDND1-201ENST00000341181 E9PSI1 815 aa26.9■■□□□ 1.9
CLDND1-201ENST00000341181 TRMT2AQ8IZ69 625 aaKnown RBP26.89■■□□□ 1.9
CLDND1-201ENST00000341181 LAS1LQ9Y4W2 734 aaKnown RBP26.89■■□□□ 1.9
CLDND1-201ENST00000341181 CDCA7Q9BWT1 371 aaPredicted RBP26.88■■□□□ 1.89
CLDND1-201ENST00000341181 RNMTO43148 476 aaKnown RBP26.88■■□□□ 1.89
CLDND1-201ENST00000341181 ILDR1Q86SU0 546 aaPredicted RBP26.88■■□□□ 1.89
CLDND1-201ENST00000341181 SCN11AQ9UI33 1791 aa26.87■■□□□ 1.89
CLDND1-201ENST00000341181 IL16Q14005 1332 aa26.87■■□□□ 1.89
CLDND1-201ENST00000341181 DDB1Q16531 1140 aa26.87■■□□□ 1.89
CLDND1-201ENST00000341181 FANCIQ9NVI1 1328 aa26.87■■□□□ 1.89
CLDND1-201ENST00000341181 EXOC5O00471 708 aa26.87■■□□□ 1.89
CLDND1-201ENST00000341181 TOGARAM1Q9Y4F4 1720 aa26.85■■□□□ 1.89
CLDND1-201ENST00000341181 A0A0G2JS52 829 aa26.85■■□□□ 1.89
CLDND1-201ENST00000341181 ZNF853P0CG23 659 aa26.85■■□□□ 1.89
CLDND1-201ENST00000341181 MYT1Q01538 1121 aa26.85■■□□□ 1.89
CLDND1-201ENST00000341181 MIS18AQ9NYP9 233 aa26.85■■□□□ 1.89
CLDND1-201ENST00000341181 IFT57Q9NWB7 429 aa26.84■■□□□ 1.89
CLDND1-201ENST00000341181 RGS17Q9UGC6 210 aaPredicted RBP26.84■■□□□ 1.89
CLDND1-201ENST00000341181 CALD1Q05682 793 aaKnown RBP26.84■■□□□ 1.89
CLDND1-201ENST00000341181 CFAP44Q96MT7 982 aa26.84■■□□□ 1.89
CLDND1-201ENST00000341181 MBIPQ9NS73 344 aa26.84■■□□□ 1.89
CLDND1-201ENST00000341181 DCAF5Q96JK2 942 aa26.83■■□□□ 1.89
CLDND1-201ENST00000341181 ZNF772Q68DY9 489 aaPredicted RBP26.82■■□□□ 1.88
CLDND1-201ENST00000341181 SIPA1L3O60292 1781 aaPredicted RBP26.82■■□□□ 1.88
CLDND1-201ENST00000341181 NKX1-1Q15270 411 aaPredicted RBP26.81■■□□□ 1.88
CLDND1-201ENST00000341181 MARCH10Q8NA82 808 aaPredicted RBP26.81■■□□□ 1.88
CLDND1-201ENST00000341181 MYH16Q9H6N6 1097 aa26.81■■□□□ 1.88
CLDND1-201ENST00000341181 MRC1P22897 1456 aa26.81■■□□□ 1.88
CLDND1-201ENST00000341181 GNAI1P63096 354 aa26.81■■□□□ 1.88
CLDND1-201ENST00000341181 CHL1O00533 1208 aa26.8■■□□□ 1.88
CLDND1-201ENST00000341181 HSP90AB1P08238 724 aaKnown RBP26.8■■□□□ 1.88
CLDND1-201ENST00000341181 TEFQ10587 303 aa26.8■■□□□ 1.88
CLDND1-201ENST00000341181 ONECUT3O60422 494 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms